RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 HSP90AB3PQ58FF7 597 aa23.86■■□□□ 1.41
PBX1-222ENST00000627490 GIGYF2Q6Y7W6 1299 aaKnown RBP23.86■■□□□ 1.41
PBX1-222ENST00000627490 SIL1Q9H173 461 aa23.86■■□□□ 1.41
PBX1-222ENST00000627490 ZBTB3Q9H5J0 574 aa23.86■■□□□ 1.41
PBX1-222ENST00000627490 USP25Q9UHP3 1055 aa23.86■■□□□ 1.41
PBX1-222ENST00000627490 A0A087WZG4 1122 aa23.85■■□□□ 1.41
PBX1-222ENST00000627490 DYNC1I1O14576 645 aa23.85■■□□□ 1.41
PBX1-222ENST00000627490 TCIRG1Q13488 830 aa23.85■■□□□ 1.41
PBX1-222ENST00000627490 TOB2Q14106 344 aaPredicted RBP23.85■■□□□ 1.41
PBX1-222ENST00000627490 DZIP3Q86Y13 1208 aaKnown RBP23.85■■□□□ 1.41
PBX1-222ENST00000627490 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
PBX1-222ENST00000627490 ZNF330Q9Y3S2 320 aaPredicted RBP23.85■■□□□ 1.41
PBX1-222ENST00000627490 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
PBX1-222ENST00000627490 PIBF1Q8WXW3 757 aa23.84■■□□□ 1.41
PBX1-222ENST00000627490 SCN7AQ01118 1682 aa23.84■■□□□ 1.41
PBX1-222ENST00000627490 RPS6KA4O75676 772 aa23.83■■□□□ 1.41
PBX1-222ENST00000627490 PTPN12Q05209 780 aaKnown RBP23.83■■□□□ 1.41
PBX1-222ENST00000627490 CCDC191Q8NCU4 936 aa23.83■■□□□ 1.41
PBX1-222ENST00000627490 MTERF4Q7Z6M4 381 aaKnown RBP23.83■■□□□ 1.4
PBX1-222ENST00000627490 HAUS7Q99871 368 aa23.83■■□□□ 1.4
PBX1-222ENST00000627490 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
PBX1-222ENST00000627490 DDX19AQ9NUU7 478 aaKnown RBP23.82■■□□□ 1.4
PBX1-222ENST00000627490 HMGB1P09429 215 aaKnown RBP23.81■■□□□ 1.4
PBX1-222ENST00000627490 MAP3K11Q16584 847 aa23.81■■□□□ 1.4
PBX1-222ENST00000627490 GIMAP6Q6P9H5 292 aa23.81■■□□□ 1.4
PBX1-222ENST00000627490 UBR3Q6ZT12 1888 aa23.81■■□□□ 1.4
PBX1-222ENST00000627490 TTC6Q86TZ1 520 aa23.81■■□□□ 1.4
PBX1-222ENST00000627490 NEK1Q96PY6 1258 aa23.81■■□□□ 1.4
PBX1-222ENST00000627490 GPR108Q9NPR9 543 aa23.81■■□□□ 1.4
PBX1-222ENST00000627490 DBNLQ9UJU6 430 aaKnown RBP23.81■■□□□ 1.4
PBX1-222ENST00000627490 KCNQ4P56696 695 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 MCMDC2Q4G0Z9 681 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 CDC37L1Q7L3B6 337 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 ZNF589Q86UQ0 364 aaPredicted RBP23.8■■□□□ 1.4
PBX1-222ENST00000627490 CHMP4CQ96CF2 233 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 LLPHQ9BRT6 129 aaKnown RBP23.8■■□□□ 1.4
PBX1-222ENST00000627490 NUP62CLQ9H1M0 184 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 CWC25Q9NXE8 425 aaPredicted RBP23.8■■□□□ 1.4
PBX1-222ENST00000627490 UQCRHLA0A096LP55 91 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 GOLGA6L6A8MZA4 724 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 CAMTA2O94983 1202 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 UQCRHP07919 91 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 TFCP2Q12800 502 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 PRIMPOLQ96LW4 560 aa23.8■■□□□ 1.4
PBX1-222ENST00000627490 SH3TC1Q8TE82 1336 aa23.79■■□□□ 1.4
PBX1-222ENST00000627490 ZSCAN16Q9H4T2 348 aaPredicted RBP23.79■■□□□ 1.4
PBX1-222ENST00000627490 SPTLC3Q9NUV7 552 aa23.79■■□□□ 1.4
PBX1-222ENST00000627490 EP400Q96L91 3159 aa23.79■■□□□ 1.4
PBX1-222ENST00000627490 C4AP0C0L4 1744 aa23.79■■□□□ 1.4
PBX1-222ENST00000627490 ATP5J2-PTCD1G3V325 749 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 CASP7P55210 303 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 HLFQ16534 295 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 TXNRD1Q16881 649 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 KLHDC4Q8TBB5 520 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 FAM200AQ8TCP9 573 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 TBC1D2BQ9UPU7 963 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 GOLGA6L4A6NEF3 574 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 APBA3O96018 575 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 HMGN5P82970 282 aaKnown RBP23.78■■□□□ 1.4
PBX1-222ENST00000627490 CLEC4GQ6UXB4 293 aa23.78■■□□□ 1.4
PBX1-222ENST00000627490 RBM43Q6ZSC3 357 aaKnown RBP23.78■■□□□ 1.4
PBX1-222ENST00000627490 RTCBQ9Y3I0 505 aaKnown RBP23.78■■□□□ 1.4
PBX1-222ENST00000627490 H7C1W4 665 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 CAVIN2O95810 425 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 ADRA2BP18089 450 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 PROM2Q8N271 834 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 SPATA32Q96LK8 384 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 HELLSQ9NRZ9 838 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 ZNF609O15014 1411 aa23.77■■□□□ 1.4
PBX1-222ENST00000627490 GNPATO15228 680 aa23.76■■□□□ 1.39
PBX1-222ENST00000627490 NOLC1Q14978 699 aaKnown RBP eCLIP23.76■■□□□ 1.39
PBX1-222ENST00000627490 UBE3BQ7Z3V4 1068 aa23.76■■□□□ 1.39
PBX1-222ENST00000627490 ZNF34Q8IZ26 560 aa23.76■■□□□ 1.39
PBX1-222ENST00000627490 KBTBD3Q8NAB2 608 aa23.76■■□□□ 1.39
PBX1-222ENST00000627490 KIF3AQ9Y496 699 aa23.76■■□□□ 1.39
PBX1-222ENST00000627490 LEO1Q8WVC0 666 aaPredicted RBP23.75■■□□□ 1.39
PBX1-222ENST00000627490 AK7Q96M32 723 aa23.75■■□□□ 1.39
PBX1-222ENST00000627490 ZNF652Q9Y2D9 606 aa23.75■■□□□ 1.39
PBX1-222ENST00000627490 SPEF2Q9C093 1822 aa23.75■■□□□ 1.39
PBX1-222ENST00000627490 DSCC1Q9BVC3 393 aa23.75■■□□□ 1.39
PBX1-222ENST00000627490 CLSTN2Q9H4D0 955 aa23.75■■□□□ 1.39
PBX1-222ENST00000627490 TYRO3Q06418 890 aa23.74■■□□□ 1.39
PBX1-222ENST00000627490 ATL3Q6DD88 541 aa23.74■■□□□ 1.39
PBX1-222ENST00000627490 NARFQ9UHQ1 456 aa23.74■■□□□ 1.39
PBX1-222ENST00000627490 CFAP45Q9UL16 551 aa23.74■■□□□ 1.39
PBX1-222ENST00000627490 NLRP10Q86W26 655 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 TNMDQ9H2S6 317 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 PFKFB2O60825 505 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 PCCAP05165 728 aaPredicted RBP23.73■■□□□ 1.39
PBX1-222ENST00000627490 RESTQ13127 1097 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 MYRIPQ8NFW9 859 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 SMARCC2Q8TAQ2 1214 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 DBNDD2Q9BQY9 259 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 TAF6LQ9Y6J9 622 aa23.73■■□□□ 1.39
PBX1-222ENST00000627490 LIG1P18858 919 aa23.72■■□□□ 1.39
PBX1-222ENST00000627490 NAA16Q6N069 864 aaPredicted RBP23.72■■□□□ 1.39
PBX1-222ENST00000627490 Q6ZUG5 572 aa23.72■■□□□ 1.39
PBX1-222ENST00000627490 FERMT3Q86UX7 667 aa23.72■■□□□ 1.39
PBX1-222ENST00000627490 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms