RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 BAP1Q92560 729 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 PXDNQ92626 1479 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 ERCC4Q92889 916 aaPredicted RBP10.04□□□□□ -0.8
SMN2-214ENST00000626847 MTA3Q9BTC8 594 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 RRP7BPQ9NSQ0 103 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 METP08581 1390 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6CA6NDK9 693 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6BA6NDN3 693 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 TPM3P06753 285 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6DP0CG33 693 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 CD151P48509 253 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 HMGN5P82970 282 aaKnown RBP10.03□□□□□ -0.8
SMN2-214ENST00000626847 CRTC2Q53ET0 693 aaPredicted RBP10.03□□□□□ -0.8
SMN2-214ENST00000626847 ZC3H12AQ5D1E8 599 aaKnown RBP10.03□□□□□ -0.8
SMN2-214ENST00000626847 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 NOL8Q76FK4 1167 aaKnown RBP10.03□□□□□ -0.8
SMN2-214ENST00000626847 CCDC91Q7Z6B0 441 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 NME8Q8N427 588 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6AQ9NYA3 693 aa10.03□□□□□ -0.8
SMN2-214ENST00000626847 NPHP3Q7Z494 1330 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 CHD4Q14839 1912 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 NOP2P46087 812 aaKnown RBP10.02□□□□□ -0.81
SMN2-214ENST00000626847 CCDC173Q0VFZ6 552 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 HSP90B2PQ58FF3 399 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 GORABQ5T7V8 394 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 TRIM50Q86XT4 487 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 CXorf38Q8TB03 319 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 DOLKQ9UPQ8 538 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 NOD1Q9Y239 953 aa10.02□□□□□ -0.81
SMN2-214ENST00000626847 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
SMN2-214ENST00000626847 S1PR4O95977 384 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 PRELPP51888 382 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
SMN2-214ENST00000626847 PTK7Q13308 1070 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 WDR78Q5VTH9 848 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 BORCS6Q96GS4 357 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 FCF1Q9Y324 198 aaKnown RBP10.01□□□□□ -0.81
SMN2-214ENST00000626847 PTPN23Q9H3S7 1636 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 NRXN3Q9Y4C0 1643 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 ADGRL2O95490 1459 aa10.01□□□□□ -0.81
SMN2-214ENST00000626847 USP32Q8NFA0 1604 aa10□□□□□ -0.81
SMN2-214ENST00000626847 FRAT2O75474 233 aaPredicted RBP10□□□□□ -0.81
SMN2-214ENST00000626847 ATP1A2P50993 1020 aa10□□□□□ -0.81
SMN2-214ENST00000626847 SARNPP82979 210 aaKnown RBP10□□□□□ -0.81
SMN2-214ENST00000626847 NBPF8Q3BBV2 869 aa10□□□□□ -0.81
SMN2-214ENST00000626847 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
SMN2-214ENST00000626847 OGFOD1Q8N543 542 aa10□□□□□ -0.81
SMN2-214ENST00000626847 ZNF428Q96B54 188 aa10□□□□□ -0.81
SMN2-214ENST00000626847 SLC10A4Q96EP9 437 aa10□□□□□ -0.81
SMN2-214ENST00000626847 PRIMPOLQ96LW4 560 aa10□□□□□ -0.81
SMN2-214ENST00000626847 TACO1Q9BSH4 297 aaKnown RBP10□□□□□ -0.81
SMN2-214ENST00000626847 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
SMN2-214ENST00000626847 TEX13AQ9BXU3 409 aaPredicted RBP10□□□□□ -0.81
SMN2-214ENST00000626847 UPF2Q9HAU5 1272 aaKnown RBP10□□□□□ -0.81
SMN2-214ENST00000626847 STK26Q9P289 416 aa10□□□□□ -0.81
SMN2-214ENST00000626847 ADGRB2O60241 1585 aa10□□□□□ -0.81
SMN2-214ENST00000626847 PEX19P40855 299 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 RGL3Q3MIN7 710 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 RNF20Q5VTR2 975 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 ANKMY2Q8IV38 441 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 ZNF511Q8NB15 262 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 TBC1D22AQ8WUA7 517 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 CHMP4CQ96CF2 233 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
SMN2-214ENST00000626847 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 SYNPO2Q9UMS6 1093 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 FRMD4BQ9Y2L6 1034 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 RREB1Q92766 1687 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 NUP188Q5SRE5 1749 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 CCP110O43303 1012 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 TRIM37O94972 964 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 APBA3O96018 575 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 SUZ12Q15022 739 aaKnown RBP9.99□□□□□ -0.81
SMN2-214ENST00000626847 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 ZNF280DQ6N043 979 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 LSM14AQ8ND56 463 aaKnown RBP9.99□□□□□ -0.81
SMN2-214ENST00000626847 NKX2-3Q8TAU0 364 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
SMN2-214ENST00000626847 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
SMN2-214ENST00000626847 CCDC189A1A4V9 331 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 ANKRD33BA6NCL7 494 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 H0YHG0 523 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 FOXO3O43524 673 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 CAPN2P17655 700 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMN2-214ENST00000626847 DPYDQ12882 1025 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 FOXD4L5Q5VV16 416 aaPredicted RBP9.98□□□□□ -0.81
SMN2-214ENST00000626847 KRBA2Q6ZNG9 492 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 ANKRD13AQ8IZ07 590 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 FOXD4L4Q8WXT5 416 aaPredicted RBP9.98□□□□□ -0.81
SMN2-214ENST00000626847 PPP1R9BQ96SB3 815 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
SMN2-214ENST00000626847 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
SMN2-214ENST00000626847 NRKQ7Z2Y5 1582 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 NWD2Q9ULI1 1742 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms