RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 SETD1BQ9UPS6 1966 aaKnown RBP16.13■□□□□ 0.17
UBE3A-209ENST00000625778 TUBGCP6Q96RT7 1819 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 HNRNPH2P55795 449 aaKnown RBP16.13■□□□□ 0.17
UBE3A-209ENST00000625778 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
UBE3A-209ENST00000625778 CLIC4Q9Y696 253 aa16.13■□□□□ 0.17
UBE3A-209ENST00000625778 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
UBE3A-209ENST00000625778 COL15A1P39059 1388 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 ATP5J2-PTCD1G3V325 749 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
UBE3A-209ENST00000625778 CTDNEP1O95476 244 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 PNMA6AP0CW24 399 aaPredicted RBP16.12■□□□□ 0.17
UBE3A-209ENST00000625778 GYS2P54840 703 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 TEX35Q5T0J7 233 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 CALCOCO1Q9P1Z2 691 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 ALDH1L1O75891 902 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
UBE3A-209ENST00000625778 TPM4P67936 248 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 MTX1Q13505 466 aa16.12■□□□□ 0.17
UBE3A-209ENST00000625778 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
UBE3A-209ENST00000625778 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
UBE3A-209ENST00000625778 CAPN2P17655 700 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 TTLL5Q6EMB2 1281 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 ARGLU1Q9NWB6 273 aaPredicted RBP16.11■□□□□ 0.17
UBE3A-209ENST00000625778 ITSN1Q15811 1721 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 MED23Q9ULK4 1368 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 MCMDC2Q4G0Z9 681 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 FHOD1Q9Y613 1164 aa16.11■□□□□ 0.17
UBE3A-209ENST00000625778 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
UBE3A-209ENST00000625778 UBE3BQ7Z3V4 1068 aa16.1■□□□□ 0.17
UBE3A-209ENST00000625778 HDAC5Q9UQL6 1122 aa16.1■□□□□ 0.17
UBE3A-209ENST00000625778 KIF2AO00139 706 aaPredicted RBP16.1■□□□□ 0.17
UBE3A-209ENST00000625778 GPATCH11Q8N954 259 aa16.1■□□□□ 0.17
UBE3A-209ENST00000625778 KIAA1468Q9P260 1216 aa16.1■□□□□ 0.17
UBE3A-209ENST00000625778 GIGYF1O75420 1035 aaPredicted RBP16.09■□□□□ 0.17
UBE3A-209ENST00000625778 DHX32Q7L7V1 743 aaKnown RBP16.09■□□□□ 0.17
UBE3A-209ENST00000625778 ENGASEQ8NFI3 743 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 PLA2G4AP47712 749 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 PFKFB2O60825 505 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 FANCCQ00597 558 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
UBE3A-209ENST00000625778 IGKV5-2P06315 115 aa16.08■□□□□ 0.17
UBE3A-209ENST00000625778 EVCP57679 992 aa16.08■□□□□ 0.17
UBE3A-209ENST00000625778 ST5P78524 1137 aa16.08■□□□□ 0.17
UBE3A-209ENST00000625778 DPF2Q92785 391 aa16.08■□□□□ 0.17
UBE3A-209ENST00000625778 UBASH3AP57075 661 aa16.08■□□□□ 0.16
UBE3A-209ENST00000625778 EP400NLQ6ZTU2 488 aa16.08■□□□□ 0.16
UBE3A-209ENST00000625778 COPS6Q7L5N1 327 aa16.08■□□□□ 0.16
UBE3A-209ENST00000625778 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
UBE3A-209ENST00000625778 C10orf67Q8IYJ2 551 aa16.08■□□□□ 0.16
UBE3A-209ENST00000625778 FMR1NBQ8N0W7 255 aaPredicted RBP16.08■□□□□ 0.16
UBE3A-209ENST00000625778 C8orf76Q96K31 380 aa16.08■□□□□ 0.16
UBE3A-209ENST00000625778 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.16
UBE3A-209ENST00000625778 CPLX1O14810 134 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-209ENST00000625778 SIRT1Q96EB6 747 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 H2AFXP16104 143 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-209ENST00000625778 GNG11P61952 73 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 TIMM10P62072 90 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 ETF1P62495 437 aaKnown RBP16.07■□□□□ 0.16
UBE3A-209ENST00000625778 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 ZNF609O15014 1411 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 ZNF202O95125 648 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-209ENST00000625778 RSPH14Q9UHP6 348 aa16.07■□□□□ 0.16
UBE3A-209ENST00000625778 LOC102724159A0A0B4J2E5 919 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 TMEM232C9JQI7 657 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 SPTLC2O15270 562 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 RXRAP19793 462 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 PWP2Q15269 919 aaKnown RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 SKIDA1Q1XH10 827 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 OSBPL5Q9H0X9 879 aaPredicted RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 ORC3Q9UBD5 711 aaPredicted RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 EID1Q9Y6B2 187 aa16.06■□□□□ 0.16
UBE3A-209ENST00000625778 RNMTO43148 476 aaKnown RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 OAS2P29728 719 aaKnown RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
UBE3A-209ENST00000625778 E7EWF7 191 aa16.05■□□□□ 0.16
UBE3A-209ENST00000625778 CYP2C19P33261 490 aa16.05■□□□□ 0.16
UBE3A-209ENST00000625778 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE3A-209ENST00000625778 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
UBE3A-209ENST00000625778 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
UBE3A-209ENST00000625778 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
UBE3A-209ENST00000625778 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
UBE3A-209ENST00000625778 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
UBE3A-209ENST00000625778 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
UBE3A-209ENST00000625778 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
UBE3A-209ENST00000625778 SPECC1Q5M775 1068 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms