RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 CARMIL3Q8ND23 1372 aa21.01■□□□□ 0.95
PCF11-207ENST00000624931 DEFB132Q7Z7B7 95 aa21.01■□□□□ 0.95
PCF11-207ENST00000624931 ZNF609O15014 1411 aa21.01■□□□□ 0.95
PCF11-207ENST00000624931 ANO2Q9NQ90 1003 aa21.01■□□□□ 0.95
PCF11-207ENST00000624931 DBNLQ9UJU6 430 aaKnown RBP21.01■□□□□ 0.95
PCF11-207ENST00000624931 R3HCC1Q9Y3T6 440 aaKnown RBP21.01■□□□□ 0.95
PCF11-207ENST00000624931 SASS6Q6UVJ0 657 aa21■□□□□ 0.95
PCF11-207ENST00000624931 NYXQ9GZU5 481 aa21■□□□□ 0.95
PCF11-207ENST00000624931 PNPLA7Q6ZV29 1317 aa21■□□□□ 0.95
PCF11-207ENST00000624931 HSPA4P34932 840 aa20.99■□□□□ 0.95
PCF11-207ENST00000624931 CCDC152Q4G0S7 254 aa20.99■□□□□ 0.95
PCF11-207ENST00000624931 DBNDD2Q9BQY9 259 aa20.99■□□□□ 0.95
PCF11-207ENST00000624931 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
PCF11-207ENST00000624931 TRIM6-TRIM34B2RNG4 842 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 DDR1Q08345 913 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 LDHAL6AQ6ZMR3 332 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 ATP6V1DQ9Y5K8 247 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 PDIA4P13667 645 aaKnown RBP20.98■□□□□ 0.95
PCF11-207ENST00000624931 SLC10A5Q5PT55 438 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 RILPL2Q969X0 211 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 CNNM1Q9NRU3 951 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 RIPOR2Q9Y4F9 1068 aa20.98■□□□□ 0.95
PCF11-207ENST00000624931 TTC41PQ6P2S7 1318 aa20.97■□□□□ 0.95
PCF11-207ENST00000624931 RTL9Q8NET4 1388 aa20.97■□□□□ 0.95
PCF11-207ENST00000624931 TIMM10P62072 90 aa20.97■□□□□ 0.95
PCF11-207ENST00000624931 KIAA2012Q0VF49 1180 aa20.97■□□□□ 0.95
PCF11-207ENST00000624931 TPTE2Q6XPS3 522 aa20.97■□□□□ 0.95
PCF11-207ENST00000624931 NPHP1O15259 732 aa20.96■□□□□ 0.95
PCF11-207ENST00000624931 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
PCF11-207ENST00000624931 METTL24Q5JXM2 366 aa20.96■□□□□ 0.95
PCF11-207ENST00000624931 CNBD1Q8NA66 436 aa20.96■□□□□ 0.95
PCF11-207ENST00000624931 CEP126Q9P2H0 1117 aa20.96■□□□□ 0.95
PCF11-207ENST00000624931 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
PCF11-207ENST00000624931 TM4SF1P30408 202 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
PCF11-207ENST00000624931 CCDC183Q5T5S1 534 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 PRR5LQ6MZQ0 368 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 GPATCH3Q96I76 525 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 NEUROD6Q96NK8 337 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 NSFL1CQ9UNZ2 370 aaKnown RBP20.95■□□□□ 0.94
PCF11-207ENST00000624931 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.95■□□□□ 0.94
PCF11-207ENST00000624931 ADORA1P30542 326 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 SF3B2Q13435 895 aaKnown RBP20.95■□□□□ 0.94
PCF11-207ENST00000624931 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 HELBQ8NG08 1087 aaPredicted RBP20.95■□□□□ 0.94
PCF11-207ENST00000624931 FBXO3Q9UK99 471 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 PALD1Q9ULE6 856 aa20.95■□□□□ 0.94
PCF11-207ENST00000624931 UQCRHLA0A096LP55 91 aa20.94■□□□□ 0.94
PCF11-207ENST00000624931 A0A1B0GUL7 405 aa20.94■□□□□ 0.94
PCF11-207ENST00000624931 GLRX3O76003 335 aaKnown RBP20.94■□□□□ 0.94
PCF11-207ENST00000624931 SERPINB2P05120 415 aa20.94■□□□□ 0.94
PCF11-207ENST00000624931 UQCRHP07919 91 aa20.94■□□□□ 0.94
PCF11-207ENST00000624931 POLRMTO00411 1230 aaKnown RBP20.93■□□□□ 0.94
PCF11-207ENST00000624931 BAG6P46379 1132 aa20.93■□□□□ 0.94
PCF11-207ENST00000624931 VGLL2Q8N8G2 317 aa20.93■□□□□ 0.94
PCF11-207ENST00000624931 BOLA2Q9H3K6 86 aa20.93■□□□□ 0.94
PCF11-207ENST00000624931 GPR108Q9NPR9 543 aa20.93■□□□□ 0.94
PCF11-207ENST00000624931 HMGB2P26583 209 aaKnown RBP20.92■□□□□ 0.94
PCF11-207ENST00000624931 USP48Q86UV5 1035 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 NDUFB9Q9Y6M9 179 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 A0A1B0GUL6 1792 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 RAD50Q92878 1312 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 IGHMBP2P38935 993 aaKnown RBP20.92■□□□□ 0.94
PCF11-207ENST00000624931 HMGN5P82970 282 aaKnown RBP20.92■□□□□ 0.94
PCF11-207ENST00000624931 SLC15A2Q16348 729 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 CELF1Q92879 486 aaKnown RBP20.92■□□□□ 0.94
PCF11-207ENST00000624931 NLRP3Q96P20 1036 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 MPHOSPH8Q99549 860 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 ZMYND15Q9H091 742 aa20.92■□□□□ 0.94
PCF11-207ENST00000624931 SNAP23O00161 211 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 TPM3P06753 285 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 UBE2HP62256 183 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 ATP2B3Q16720 1220 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 FOXD4L5Q5VV16 416 aaPredicted RBP20.91■□□□□ 0.94
PCF11-207ENST00000624931 SLC51AQ86UW1 340 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 CNTROBQ8N137 903 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 FOXD4L4Q8WXT5 416 aaPredicted RBP20.91■□□□□ 0.94
PCF11-207ENST00000624931 EDC3Q96F86 508 aaKnown RBP20.91■□□□□ 0.94
PCF11-207ENST00000624931 PRIMPOLQ96LW4 560 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 STK32BQ9NY57 414 aa20.91■□□□□ 0.94
PCF11-207ENST00000624931 RPAP1Q9BWH6 1393 aaPredicted RBP20.9■□□□□ 0.94
PCF11-207ENST00000624931 ZSCAN22P10073 491 aaPredicted RBP20.9■□□□□ 0.94
PCF11-207ENST00000624931 SGSM2O43147 1006 aa20.9■□□□□ 0.94
PCF11-207ENST00000624931 TAF5LO75529 589 aa20.9■□□□□ 0.94
PCF11-207ENST00000624931 ANKRD18AQ8IVF6 992 aa20.9■□□□□ 0.94
PCF11-207ENST00000624931 FLAD1Q8NFF5 587 aa20.9■□□□□ 0.94
PCF11-207ENST00000624931 CDC5LQ99459 802 aaKnown RBP20.9■□□□□ 0.94
PCF11-207ENST00000624931 LIMCH1Q9UPQ0 1083 aa20.9■□□□□ 0.94
PCF11-207ENST00000624931 QSER1Q2KHR3 1735 aa20.89■□□□□ 0.93
PCF11-207ENST00000624931 RNF214Q8ND24 703 aa20.89■□□□□ 0.93
PCF11-207ENST00000624931 RUFY2Q8WXA3 655 aa20.89■□□□□ 0.93
PCF11-207ENST00000624931 XAGE2Q96GT9 111 aa20.89■□□□□ 0.93
PCF11-207ENST00000624931 ZSCAN31Q96LW9 406 aaPredicted RBP20.89■□□□□ 0.93
PCF11-207ENST00000624931 ARAP2Q8WZ64 1704 aa20.89■□□□□ 0.93
PCF11-207ENST00000624931 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
PCF11-207ENST00000624931 MROH5Q6ZUA9 1318 aa20.88■□□□□ 0.93
PCF11-207ENST00000624931 ATP5JP18859 108 aa20.88■□□□□ 0.93
PCF11-207ENST00000624931 PKNOX2Q96KN3 472 aa20.88■□□□□ 0.93
PCF11-207ENST00000624931 TTC14Q96N46 770 aa20.88■□□□□ 0.93
PCF11-207ENST00000624931 PDGFDQ9GZP0 370 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms