RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 KDM4AO75164 1064 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 RPS6KB1P23443 525 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 TTC31Q49AM3 519 aaPredicted RBP14.53□□□□□ -0.08
LITAF-221ENST00000622633 RNF20Q5VTR2 975 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 RAPGEF4Q8WZA2 1011 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
LITAF-221ENST00000622633 NDUFB9Q9Y6M9 179 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 STK3Q13188 491 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 TTC6Q86TZ1 520 aa14.53□□□□□ -0.08
LITAF-221ENST00000622633 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
LITAF-221ENST00000622633 CALR3Q96L12 384 aaKnown RBP14.53□□□□□ -0.08
LITAF-221ENST00000622633 RRP15Q9Y3B9 282 aaKnown RBP14.53□□□□□ -0.08
LITAF-221ENST00000622633 PHRF1Q9P1Y6 1649 aaKnown RBP14.53□□□□□ -0.08
LITAF-221ENST00000622633 PPP1R12AO14974 1030 aaPredicted RBP14.52□□□□□ -0.08
LITAF-221ENST00000622633 TOB2Q14106 344 aaPredicted RBP14.52□□□□□ -0.08
LITAF-221ENST00000622633 LRCH2Q5VUJ6 765 aa14.52□□□□□ -0.08
LITAF-221ENST00000622633 USP16Q9Y5T5 823 aa14.52□□□□□ -0.08
LITAF-221ENST00000622633 ERBB3P21860 1342 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.09
LITAF-221ENST00000622633 TAF5LO75529 589 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 CHGBP05060 677 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 TFCP2Q12800 502 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 ZSCAN26Q16670 478 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 ANKRD13DQ6ZTN6 518 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 MED23Q9ULK4 1368 aa14.52□□□□□ -0.09
LITAF-221ENST00000622633 SLIT3O75094 1523 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 NPHP3Q7Z494 1330 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 AP5Z1O43299 807 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 KRT85P78386 507 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 ANKRD1Q15327 319 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 GTF3C6Q969F1 213 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 DBNLQ9UJU6 430 aaKnown RBP14.51□□□□□ -0.09
LITAF-221ENST00000622633 TTC36A6NLP5 189 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 PHKG2P15735 406 aa14.51□□□□□ -0.09
LITAF-221ENST00000622633 TFIP11Q9UBB9 837 aaKnown RBP14.51□□□□□ -0.09
LITAF-221ENST00000622633 LIG1P18858 919 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 PDCP20941 246 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 CAMK4Q16566 473 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 UBE3BQ7Z3V4 1068 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 SUGP1Q8IWZ8 645 aaKnown RBP14.5□□□□□ -0.09
LITAF-221ENST00000622633 CCDC112Q8NEF3 446 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 RBM28Q9NW13 759 aaKnown RBP14.5□□□□□ -0.09
LITAF-221ENST00000622633 ATP5J2-PTCD1G3V325 749 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 PTCD1O75127 700 aaKnown RBP14.5□□□□□ -0.09
LITAF-221ENST00000622633 ATP5JP18859 108 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 RFX5P48382 616 aaPredicted RBP14.5□□□□□ -0.09
LITAF-221ENST00000622633 PTPN12Q05209 780 aaKnown RBP14.5□□□□□ -0.09
LITAF-221ENST00000622633 BIRC2Q13490 618 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 TNNI3KQ59H18 835 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 CCDC129Q6ZRS4 1044 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 COPRSQ9NQ92 184 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 FPGT-TNNI3KV9GXZ4 949 aa14.5□□□□□ -0.09
LITAF-221ENST00000622633 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
LITAF-221ENST00000622633 TATP17735 454 aaPredicted RBP14.49□□□□□ -0.09
LITAF-221ENST00000622633 SLFNL1Q499Z3 407 aa14.49□□□□□ -0.09
LITAF-221ENST00000622633 PROSER2Q86WR7 435 aaPredicted RBP14.49□□□□□ -0.09
LITAF-221ENST00000622633 COL15A1P39059 1388 aa14.49□□□□□ -0.09
LITAF-221ENST00000622633 C11orf91Q3C1V1 193 aa14.49□□□□□ -0.09
LITAF-221ENST00000622633 LRP10Q7Z4F1 713 aa14.49□□□□□ -0.09
LITAF-221ENST00000622633 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
LITAF-221ENST00000622633 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
LITAF-221ENST00000622633 HMG20BQ9P0W2 317 aa14.49□□□□□ -0.09
LITAF-221ENST00000622633 FHOD1Q9Y613 1164 aa14.49□□□□□ -0.09
LITAF-221ENST00000622633 JAK2O60674 1132 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 SNRPA1P09661 255 aaKnown RBP14.48□□□□□ -0.09
LITAF-221ENST00000622633 CCDC192P0DO97 292 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 PLA2G4AP47712 749 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 ST5P78524 1137 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 PPP2R5AQ15172 486 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 DDX17Q92841 729 aaKnown RBP14.48□□□□□ -0.09
LITAF-221ENST00000622633 SMARCE1Q969G3 411 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 DBNDD2Q9BQY9 259 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 CWC15Q9P013 229 aaKnown RBP14.48□□□□□ -0.09
LITAF-221ENST00000622633 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 PAXBP1Q9Y5B6 917 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 CSB-PGBD3P0DP91 1061 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 MAGEA9P43362 315 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 MCTP2Q6DN12 878 aa14.48□□□□□ -0.09
LITAF-221ENST00000622633 C16orf45Q96MC5 204 aaPredicted RBP14.48□□□□□ -0.09
LITAF-221ENST00000622633 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
LITAF-221ENST00000622633 SIPA1L3O60292 1781 aaPredicted RBP14.47□□□□□ -0.09
LITAF-221ENST00000622633 MAP9Q49MG5 647 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 TEX35Q5T0J7 233 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 TTC5Q8N0Z6 440 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 NEK1Q96PY6 1258 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 NUP62CLQ9H1M0 184 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 A0A087WZG4 1122 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 MAP2K2P36507 400 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 MAP3K11Q16584 847 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 CKAP2LQ8IYA6 745 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 IFNL2Q8IZJ0 200 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 SPC24Q8NBT2 197 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 SPATA32Q96LK8 384 aa14.47□□□□□ -0.09
LITAF-221ENST00000622633 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.47□□□□□ -0.09
LITAF-221ENST00000622633 V9GYY5 206 aaPredicted RBP14.47□□□□□ -0.09
LITAF-221ENST00000622633 GOLGA6L4A6NEF3 574 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms