RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 ADH1AP07327 375 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 SMIM5Q71RC9 77 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 PHTF2Q8N3S3 785 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 PLPP7Q8NBV4 271 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 DCAF11Q8TEB1 546 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 CCDC85AQ96PX6 553 aaPredicted RBP7.1□□□□□ -1.27
SRSF4-207ENST00000622143 NLRP2Q9NX02 1062 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
SRSF4-207ENST00000622143 DOLKQ9UPQ8 538 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 PCDHB11Q9Y5F2 797 aa7.1□□□□□ -1.27
SRSF4-207ENST00000622143 MAFBQ9Y5Q3 323 aaPredicted RBP7.1□□□□□ -1.27
SRSF4-207ENST00000622143 VSIG8P0DPA2 414 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 CTSOP43234 321 aaPredicted RBP7.09□□□□□ -1.27
SRSF4-207ENST00000622143 RELBQ01201 579 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 COL23A1Q86Y22 540 aaPredicted RBP7.09□□□□□ -1.27
SRSF4-207ENST00000622143 DEPDC4Q8N2C3 294 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 DDX54Q8TDD1 881 aaKnown RBP7.09□□□□□ -1.27
SRSF4-207ENST00000622143 SLC16A10Q8TF71 515 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 CDCA7Q9BWT1 371 aaPredicted RBP7.09□□□□□ -1.27
SRSF4-207ENST00000622143 CARD10Q9BWT7 1032 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 NMRK2Q9NPI5 230 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 ABCC6O95255 1503 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 QSER1Q2KHR3 1735 aa7.09□□□□□ -1.27
SRSF4-207ENST00000622143 IGSF1Q8N6C5 1336 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 RFX1P22670 979 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 LMOD1P29536 600 aaPredicted RBP7.08□□□□□ -1.28
SRSF4-207ENST00000622143 ERVK-9P63128 1117 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 TSGA10IPQ3SY00 556 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 USP17L2Q6R6M4 530 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 INSM2Q96T92 566 aaPredicted RBP7.08□□□□□ -1.28
SRSF4-207ENST00000622143 CABP1Q9NZU7 370 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 TRPM1Q7Z4N2 1603 aa7.08□□□□□ -1.28
SRSF4-207ENST00000622143 KAT6BQ8WYB5 2073 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 PPFIA3O75145 1194 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 GMPRP36959 345 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 PTGIRP43119 386 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 GSK3AP49840 483 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 NCOA4Q13772 614 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.07□□□□□ -1.281e-15■□□□□ 8.6
SRSF4-207ENST00000622143 OXLD1Q5BKU9 147 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 FOXD4L5Q5VV16 416 aaPredicted RBP7.07□□□□□ -1.28
SRSF4-207ENST00000622143 ARHGEF25Q86VW2 580 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 ZSCAN1Q8NBB4 408 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 IRF7Q92985 503 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 KLRG1Q96E93 195 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 ZNF395Q9H8N7 513 aaPredicted RBP7.07□□□□□ -1.28
SRSF4-207ENST00000622143 PODXL2Q9NZ53 605 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 CCNL1Q9UK58 526 aaPredicted RBP7.07□□□□□ -1.28
SRSF4-207ENST00000622143 DOT1LQ8TEK3 1739 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 CCDC7Q96M83 1385 aa7.07□□□□□ -1.28
SRSF4-207ENST00000622143 MYCP01106 439 aaPredicted RBP7.06□□□□□ -1.28
SRSF4-207ENST00000622143 IL2RBP14784 551 aa7.06□□□□□ -1.28
SRSF4-207ENST00000622143 SCTRP47872 440 aa7.06□□□□□ -1.28
SRSF4-207ENST00000622143 RNF217Q8TC41 542 aa7.06□□□□□ -1.28
SRSF4-207ENST00000622143 LTV1Q96GA3 475 aaPredicted RBP7.06□□□□□ -1.28
SRSF4-207ENST00000622143 POLMQ9NP87 494 aaPredicted RBP7.06□□□□□ -1.28
SRSF4-207ENST00000622143 QRICH2Q9H0J4 1663 aa7.06□□□□□ -1.28
SRSF4-207ENST00000622143 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.05□□□□□ -1.28
SRSF4-207ENST00000622143 FIGNL2A6NMB9 653 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 TOMM70O94826 608 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 PTSQ03393 145 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 MAP7D1Q3KQU3 841 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 SLC27A3Q5K4L6 730 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 NFAT5O94916 1531 aa7.05□□□□□ -1.28
SRSF4-207ENST00000622143 HSPA1AP0DMV8 641 aaKnown RBP7.04□□□□□ -1.28
SRSF4-207ENST00000622143 HSPA1BP0DMV9 641 aaKnown RBP7.04□□□□□ -1.28
SRSF4-207ENST00000622143 EML3Q32P44 896 aa7.04□□□□□ -1.28
SRSF4-207ENST00000622143 CC2D2BQ6DHV5 1058 aa7.04□□□□□ -1.28
SRSF4-207ENST00000622143 AMIGO3Q86WK7 504 aa7.04□□□□□ -1.28
SRSF4-207ENST00000622143 C16orf71Q8IYS4 520 aaPredicted RBP7.04□□□□□ -1.28
SRSF4-207ENST00000622143 CD2APQ9Y5K6 639 aa7.04□□□□□ -1.28
SRSF4-207ENST00000622143 TTC21BQ7Z4L5 1316 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 SLC35F4A4IF30 521 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 ATP5J2-PTCD1G3V325 749 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 NBPF1Q3BBV0 1214 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 CDCA8Q53HL2 280 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 CYP2U1Q7Z449 544 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 JMYQ8N9B5 988 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 KCNH5Q8NCM2 988 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 ANKRD24Q8TF21 1146 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 OSBPL3Q9H4L5 887 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 LY75O60449 1722 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 NSD2O96028 1365 aa7.03□□□□□ -1.28
SRSF4-207ENST00000622143 KCPQ6ZWJ8 1503 aa7.02□□□□□ -1.29
SRSF4-207ENST00000622143 MEN1O00255 615 aa7.02□□□□□ -1.29
SRSF4-207ENST00000622143 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
SRSF4-207ENST00000622143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.02□□□□□ -1.29
SRSF4-207ENST00000622143 PBXIP1Q96AQ6 731 aa7.02□□□□□ -1.29
SRSF4-207ENST00000622143 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
SRSF4-207ENST00000622143 C5P01031 1676 aa7.02□□□□□ -1.29
SRSF4-207ENST00000622143 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
SRSF4-207ENST00000622143 LTN1O94822 1766 aa7.01□□□□□ -1.29
SRSF4-207ENST00000622143 N4BP2Q86UW6 1770 aaPredicted RBP7.01□□□□□ -1.29
SRSF4-207ENST00000622143 ANKRD36BQ8N2N9 1353 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms