RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 FBXO3Q9UK99 471 aa6.54□□□□□ -1.36
SHMT1-211ENST00000618902 LEMD3Q9Y2U8 911 aa6.54□□□□□ -1.36
SHMT1-211ENST00000618902 PPIP5K2O43314 1243 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 TAF5LO75529 589 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 IRX6P78412 446 aaPredicted RBP6.53□□□□□ -1.36
SHMT1-211ENST00000618902 ATP8B2P98198 1209 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 CHRNDQ07001 517 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 CCDC57Q2TAC2 916 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 C15orf52Q6ZUT6 534 aaKnown RBP6.53□□□□□ -1.36
SHMT1-211ENST00000618902 VGLL2Q8N8G2 317 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 SSH3Q8TE77 659 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 MPHOSPH8Q99549 860 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 COPRSQ9NQ92 184 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 GGA1Q9UJY5 639 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 NSFL1CQ9UNZ2 370 aaKnown RBP6.53□□□□□ -1.36
SHMT1-211ENST00000618902 PCDHB15Q9Y5E8 787 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 A0A1B0GUL6 1792 aa6.53□□□□□ -1.36
SHMT1-211ENST00000618902 MYO3BQ8WXR4 1341 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 SCN9AQ15858 1988 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 YDJCA8MPS7 323 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 EYA2O00167 538 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 SRGAP3O43295 1099 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 UFL1O94874 794 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 MS4A1P11836 297 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 AOC3Q16853 763 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 CHADLQ6NUI6 762 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 LDHAL6AQ6ZMR3 332 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 ERICH6Q7L0X2 663 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.52□□□□□ -1.37
SHMT1-211ENST00000618902 AGBL3Q8NEM8 1001 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 EXOC6Q8TAG9 804 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 SIL1Q9H173 461 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 TAF1DQ9H5J8 278 aaPredicted RBP6.52□□□□□ -1.37
SHMT1-211ENST00000618902 RRAGCQ9HB90 399 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 KCNQ5Q9NR82 932 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 ADARB2Q9NS39 739 aaKnown RBP6.52□□□□□ -1.37
SHMT1-211ENST00000618902 ANKIB1Q9P2G1 1089 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 DDX19BQ9UMR2 479 aa6.52□□□□□ -1.37
SHMT1-211ENST00000618902 ZNF541Q9H0D2 1346 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 TIAM2Q8IVF5 1701 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 POTECB2RU33 542 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 C6orf229H3BNL8 230 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 H7C1D1 291 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 RIMBP2O15034 1052 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 IGSF3O75054 1194 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 SASH1O94885 1247 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 FGFR2P21802 821 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 DOK7Q18PE1 504 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 TAF7LQ5H9L4 462 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 CIAPIN1Q6FI81 312 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 CCDC136Q96JN2 1154 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 COA1Q9GZY4 146 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 CHMP4BQ9H444 224 aaKnown RBP6.51□□□□□ -1.37
SHMT1-211ENST00000618902 NMRK2Q9NPI5 230 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 CNNM1Q9NRU3 951 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 PGAP2Q9UHJ9 254 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 MED23Q9ULK4 1368 aa6.51□□□□□ -1.37
SHMT1-211ENST00000618902 G3V3G9 751 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 CIAO1O76071 339 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 DDNO94850 711 aaPredicted RBP6.5□□□□□ -1.37
SHMT1-211ENST00000618902 VIL1P09327 827 aaKnown RBP6.5□□□□□ -1.37
SHMT1-211ENST00000618902 ADORA1P30542 326 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 EPHX2P34913 555 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 FKBP1AP62942 108 aaKnown RBP6.5□□□□□ -1.37
SHMT1-211ENST00000618902 METTL24Q5JXM2 366 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 DCAF8Q5TAQ9 597 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 STRIP1Q5VSL9 837 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 ZNF526Q8TF50 670 aaPredicted RBP6.5□□□□□ -1.37
SHMT1-211ENST00000618902 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 DBNDD1Q9H9R9 158 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 CREBZFQ9NS37 354 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 GPRC5DQ9NZD1 345 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 NOP58Q9Y2X3 529 aaKnown RBP6.5□□□□□ -1.37
SHMT1-211ENST00000618902 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 MROH5Q6ZUA9 1318 aa6.5□□□□□ -1.37
SHMT1-211ENST00000618902 SHTN1A0MZ66 631 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 UNCXA6NJT0 531 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 PDE8BO95263 885 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 CXCL9Q07325 125 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 TFCP2Q12800 502 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 AAMPQ13685 434 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 UBE4AQ14139 1066 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 FBXO33Q7Z6M2 555 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 OGFOD1Q8N543 542 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 FAM84BQ96KN1 310 aaPredicted RBP6.49□□□□□ -1.37
SHMT1-211ENST00000618902 MXD3Q9BW11 206 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 EXOC6BQ9Y2D4 811 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 PITPNM2Q9BZ72 1349 aa6.49□□□□□ -1.37
SHMT1-211ENST00000618902 ZNF646O15015 1829 aaPredicted RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 USP17L3A6NCW0 530 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 USP17L4A6NCW7 530 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 ECE2O60344 883 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 SURF6O75683 361 aaKnown RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 RAD17O75943 681 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 ANP32AP39687 249 aaKnown RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 IL15P40933 162 aaPredicted RBP6.48□□□□□ -1.37
SHMT1-211ENST00000618902 GYG1P46976 350 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 BCAMP50895 628 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 SCNN1DP51172 638 aa6.48□□□□□ -1.37
SHMT1-211ENST00000618902 ZNF280AP59817 542 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms