RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 ARHGEF6Q15052 776 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 RIC3Q7Z5B4 369 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
SNX9-202ENST00000614703 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
SNX9-202ENST00000614703 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
SNX9-202ENST00000614703 LDLRAD1Q5T700 205 aa12.48□□□□□ -0.41
SNX9-202ENST00000614703 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
SNX9-202ENST00000614703 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
SNX9-202ENST00000614703 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
SNX9-202ENST00000614703 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
SNX9-202ENST00000614703 CHMP4AQ9BY43 222 aa12.48□□□□□ -0.41
SNX9-202ENST00000614703 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
SNX9-202ENST00000614703 DACT2Q5SW24 774 aa12.47□□□□□ -0.41
SNX9-202ENST00000614703 FBXW7Q969H0 707 aa12.47□□□□□ -0.41
SNX9-202ENST00000614703 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
SNX9-202ENST00000614703 ANGEL1Q9UNK9 670 aaKnown RBP12.47□□□□□ -0.41
SNX9-202ENST00000614703 LAS1LQ9Y4W2 734 aaKnown RBP12.47□□□□□ -0.41
SNX9-202ENST00000614703 COL4A1P02462 1669 aa12.47□□□□□ -0.41
SNX9-202ENST00000614703 POTEFA5A3E0 1075 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNX9-202ENST00000614703 NBPF11Q86T75 865 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 ARMC5Q96C12 935 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 CWC25Q9NXE8 425 aaPredicted RBP12.46□□□□□ -0.41
SNX9-202ENST00000614703 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
SNX9-202ENST00000614703 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
SNX9-202ENST00000614703 LAMB1P07942 1786 aa12.46□□□□□ -0.42
SNX9-202ENST00000614703 BRCA2P51587 3418 aa12.45□□□□□ -0.42
SNX9-202ENST00000614703 CEP290O15078 2479 aa12.45□□□□□ -0.42
SNX9-202ENST00000614703 DDX58O95786 925 aaKnown RBP12.45□□□□□ -0.42
SNX9-202ENST00000614703 PRKG1Q13976 671 aa12.45□□□□□ -0.42
SNX9-202ENST00000614703 MAP3K11Q16584 847 aa12.45□□□□□ -0.42
SNX9-202ENST00000614703 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
SNX9-202ENST00000614703 BSDC1Q9NW68 430 aaPredicted RBP12.45□□□□□ -0.42
SNX9-202ENST00000614703 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
SNX9-202ENST00000614703 MYO1BO43795 1136 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 SASH1O94885 1247 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 CCT4P50991 539 aaKnown RBP12.44□□□□□ -0.42
SNX9-202ENST00000614703 SP3Q02447 781 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 KRT24Q2M2I5 525 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 TTLL5Q6EMB2 1281 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 MYD88Q99836 296 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 MYH3P11055 1940 aa12.44□□□□□ -0.42
SNX9-202ENST00000614703 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
SNX9-202ENST00000614703 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
SNX9-202ENST00000614703 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
SNX9-202ENST00000614703 WNK4Q96J92 1243 aa12.43□□□□□ -0.42
SNX9-202ENST00000614703 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
SNX9-202ENST00000614703 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
SNX9-202ENST00000614703 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
SNX9-202ENST00000614703 ECM29Q5VYK3 1845 aa12.42□□□□□ -0.42
SNX9-202ENST00000614703 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
SNX9-202ENST00000614703 EN2P19622 333 aaPredicted RBP12.42□□□□□ -0.42
SNX9-202ENST00000614703 CTSWP56202 376 aa12.42□□□□□ -0.42
SNX9-202ENST00000614703 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
SNX9-202ENST00000614703 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
SNX9-202ENST00000614703 CD99L2Q8TCZ2 262 aa12.42□□□□□ -0.42
SNX9-202ENST00000614703 ANKRD2Q9GZV1 360 aa12.42□□□□□ -0.42
SNX9-202ENST00000614703 ZNF646O15015 1829 aaPredicted RBP12.41□□□□□ -0.42
SNX9-202ENST00000614703 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNX9-202ENST00000614703 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
SNX9-202ENST00000614703 CRHR2Q13324 411 aa12.41□□□□□ -0.42
SNX9-202ENST00000614703 SLC9C1Q4G0N8 1177 aa12.41□□□□□ -0.42
SNX9-202ENST00000614703 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
SNX9-202ENST00000614703 ZBED3Q96IU2 234 aaPredicted RBP12.41□□□□□ -0.42
SNX9-202ENST00000614703 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
SNX9-202ENST00000614703 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
SNX9-202ENST00000614703 TRIOBPQ9H2D6 2365 aa12.41□□□□□ -0.42
SNX9-202ENST00000614703 SPEF2Q9C093 1822 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
SNX9-202ENST00000614703 NEXNQ0ZGT2 675 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 RALBP1Q15311 655 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 RUNDC1Q96C34 613 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
SNX9-202ENST00000614703 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
SNX9-202ENST00000614703 ZNF804BA4D1E1 1349 aa12.39□□□□□ -0.43
SNX9-202ENST00000614703 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
SNX9-202ENST00000614703 KCNJ4P48050 445 aa12.39□□□□□ -0.43
SNX9-202ENST00000614703 GTF2IP78347 998 aa12.39□□□□□ -0.43
SNX9-202ENST00000614703 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
SNX9-202ENST00000614703 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
SNX9-202ENST00000614703 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
SNX9-202ENST00000614703 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
SNX9-202ENST00000614703 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
SNX9-202ENST00000614703 SZT2Q5T011 3432 aa12.38□□□□□ -0.43
SNX9-202ENST00000614703 TNFAIP1Q13829 316 aa12.38□□□□□ -0.43
SNX9-202ENST00000614703 CLMNQ96JQ2 1002 aa12.38□□□□□ -0.43
SNX9-202ENST00000614703 GREM2Q9H772 168 aa12.38□□□□□ -0.43
SNX9-202ENST00000614703 ZFYVE28Q9HCC9 887 aa12.38□□□□□ -0.43
SNX9-202ENST00000614703 GNRH1P01148 92 aa12.37□□□□□ -0.43
SNX9-202ENST00000614703 FKBP1AP62942 108 aaKnown RBP12.37□□□□□ -0.43
SNX9-202ENST00000614703 KIF22Q14807 665 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms