RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TRPA1O75762 1119 aa22.84■■□□□ 1.25
SMN2-213ENST00000614240 SLC10A3P09131 477 aa22.84■■□□□ 1.25
SMN2-213ENST00000614240 SAGE1Q9NXZ1 904 aa22.84■■□□□ 1.25
SMN2-213ENST00000614240 MED23Q9ULK4 1368 aa22.84■■□□□ 1.25
SMN2-213ENST00000614240 FKBP1BP68106 108 aa22.83■■□□□ 1.25
SMN2-213ENST00000614240 MLLT1Q03111 559 aaPredicted RBP22.83■■□□□ 1.25
SMN2-213ENST00000614240 COA1Q9GZY4 146 aa22.83■■□□□ 1.25
SMN2-213ENST00000614240 RNF186Q9NXI6 227 aa22.83■■□□□ 1.25
SMN2-213ENST00000614240 PITPNM2Q9BZ72 1349 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 CASP8AP2Q9UKL3 1982 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 FLIIQ13045 1269 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 FKBP5Q13451 457 aaPredicted RBP22.82■■□□□ 1.24
SMN2-213ENST00000614240 GCKRQ14397 625 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 MPHOSPH8Q99549 860 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 MXD3Q9BW11 206 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 SCAF8Q9UPN6 1271 aaKnown RBP22.82■■□□□ 1.24
SMN2-213ENST00000614240 LEMD3Q9Y2U8 911 aa22.82■■□□□ 1.24
SMN2-213ENST00000614240 ITGA6P23229 1130 aa22.81■■□□□ 1.24
SMN2-213ENST00000614240 ANKRD2Q9GZV1 360 aa22.81■■□□□ 1.24
SMN2-213ENST00000614240 IL16Q14005 1332 aa22.81■■□□□ 1.24
SMN2-213ENST00000614240 KCNJ4P48050 445 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 TTLL12Q14166 644 aaPredicted RBP22.8■■□□□ 1.24
SMN2-213ENST00000614240 NBPF9Q3BBW0 867 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 DACT2Q5SW24 774 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 STRIP1Q5VSL9 837 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 REM2Q8IYK8 340 aaPredicted RBP22.8■■□□□ 1.24
SMN2-213ENST00000614240 DNAAF4Q8WXU2 420 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 CSRNP1Q96S65 589 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 ZNF804BA4D1E1 1349 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 MYO3BQ8WXR4 1341 aa22.8■■□□□ 1.24
SMN2-213ENST00000614240 NF2P35240 595 aa22.79■■□□□ 1.24
SMN2-213ENST00000614240 PRAMEF18Q5VWM3 479 aa22.79■■□□□ 1.24
SMN2-213ENST00000614240 RASAL3Q86YV0 1011 aa22.79■■□□□ 1.24
SMN2-213ENST00000614240 PLA2G12BQ9BX93 195 aa22.79■■□□□ 1.24
SMN2-213ENST00000614240 TTLL5Q6EMB2 1281 aa22.78■■□□□ 1.24
SMN2-213ENST00000614240 TXNRD3Q86VQ6 643 aa22.78■■□□□ 1.24
SMN2-213ENST00000614240 LINS1Q8NG48 757 aa22.78■■□□□ 1.24
SMN2-213ENST00000614240 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
SMN2-213ENST00000614240 SALL2Q9Y467 1007 aaPredicted RBP22.78■■□□□ 1.24
SMN2-213ENST00000614240 UBE2Q2LH0YL09 131 aa22.77■■□□□ 1.24
SMN2-213ENST00000614240 RGS19P49795 217 aa22.77■■□□□ 1.24
SMN2-213ENST00000614240 MOB2Q70IA6 237 aa22.77■■□□□ 1.24
SMN2-213ENST00000614240 HDAC9Q9UKV0 1011 aa22.77■■□□□ 1.24
SMN2-213ENST00000614240 ANKRD18BA2A2Z9 1011 aa22.76■■□□□ 1.23
SMN2-213ENST00000614240 WNT10BO00744 389 aa22.76■■□□□ 1.23
SMN2-213ENST00000614240 FANCIQ9NVI1 1328 aa22.76■■□□□ 1.23
SMN2-213ENST00000614240 CSF1RP07333 972 aa22.75■■□□□ 1.23
SMN2-213ENST00000614240 KLRK1P26718 216 aa22.75■■□□□ 1.23
SMN2-213ENST00000614240 MMP14P50281 582 aa22.75■■□□□ 1.23
SMN2-213ENST00000614240 KIAA0825Q8IV33 1275 aa22.75■■□□□ 1.23
SMN2-213ENST00000614240 CHMP3Q9Y3E7 222 aa22.75■■□□□ 1.23
SMN2-213ENST00000614240 PSME4Q14997 1843 aa22.75■■□□□ 1.23
SMN2-213ENST00000614240 SPEF2Q9C093 1822 aa22.74■■□□□ 1.23
SMN2-213ENST00000614240 SASH1O94885 1247 aa22.74■■□□□ 1.23
SMN2-213ENST00000614240 CASP7P55210 303 aa22.74■■□□□ 1.23
SMN2-213ENST00000614240 GTF2IP78347 998 aa22.74■■□□□ 1.23
SMN2-213ENST00000614240 CHRNDQ07001 517 aa22.74■■□□□ 1.23
SMN2-213ENST00000614240 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
SMN2-213ENST00000614240 MYH3P11055 1940 aa22.74■■□□□ 1.23
SMN2-213ENST00000614240 PAPPA2Q9BXP8 1791 aa22.73■■□□□ 1.23
SMN2-213ENST00000614240 VAMP4O75379 141 aa22.73■■□□□ 1.23
SMN2-213ENST00000614240 EXOSC9Q06265 439 aaKnown RBP22.72■■□□□ 1.23
SMN2-213ENST00000614240 IFIT5Q13325 482 aaKnown RBP22.72■■□□□ 1.23
SMN2-213ENST00000614240 WDR63Q8IWG1 891 aa22.72■■□□□ 1.23
SMN2-213ENST00000614240 ANP32CO43423 234 aa22.71■■□□□ 1.23
SMN2-213ENST00000614240 PRKG1Q13976 671 aa22.71■■□□□ 1.23
SMN2-213ENST00000614240 APOBEC3FQ8IUX4 373 aaKnown RBP22.71■■□□□ 1.23
SMN2-213ENST00000614240 HELBQ8NG08 1087 aaPredicted RBP22.71■■□□□ 1.23
SMN2-213ENST00000614240 CD209Q9NNX6 404 aa22.71■■□□□ 1.23
SMN2-213ENST00000614240 TAF5LO75529 589 aa22.7■■□□□ 1.22
SMN2-213ENST00000614240 ARMC9Q7Z3E5 817 aa22.7■■□□□ 1.22
SMN2-213ENST00000614240 CTU1Q7Z7A3 348 aaKnown RBP22.7■■□□□ 1.22
SMN2-213ENST00000614240 AKAP11Q9UKA4 1901 aa22.69■■□□□ 1.22
SMN2-213ENST00000614240 F6X3S4 739 aa22.69■■□□□ 1.22
SMN2-213ENST00000614240 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
SMN2-213ENST00000614240 DLGAP5Q15398 846 aa22.69■■□□□ 1.22
SMN2-213ENST00000614240 TAF7LQ5H9L4 462 aa22.69■■□□□ 1.22
SMN2-213ENST00000614240 SNAP23O00161 211 aa22.67■■□□□ 1.22
SMN2-213ENST00000614240 TBC1D8O95759 1140 aa22.67■■□□□ 1.22
SMN2-213ENST00000614240 FOXO4P98177 505 aa22.67■■□□□ 1.22
SMN2-213ENST00000614240 BEND3Q5T5X7 828 aa22.67■■□□□ 1.22
SMN2-213ENST00000614240 ZNF804AQ7Z570 1209 aa22.67■■□□□ 1.22
SMN2-213ENST00000614240 PLIN1O60240 522 aa22.66■■□□□ 1.22
SMN2-213ENST00000614240 PTPN12Q05209 780 aaKnown RBP22.66■■□□□ 1.22
SMN2-213ENST00000614240 CCDC57Q2TAC2 916 aa22.66■■□□□ 1.22
SMN2-213ENST00000614240 LMBR1LQ6UX01 489 aa22.66■■□□□ 1.22
SMN2-213ENST00000614240 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
SMN2-213ENST00000614240 ANGEL1Q9UNK9 670 aaKnown RBP22.66■■□□□ 1.22
SMN2-213ENST00000614240 F8W031 263 aaPredicted RBP22.65■■□□□ 1.22
SMN2-213ENST00000614240 SOX10P56693 466 aa22.65■■□□□ 1.22
SMN2-213ENST00000614240 SREBF2Q12772 1141 aa22.65■■□□□ 1.22
SMN2-213ENST00000614240 C15orf52Q6ZUT6 534 aaKnown RBP22.65■■□□□ 1.22
SMN2-213ENST00000614240 C9orf78Q9NZ63 289 aaPredicted RBP22.65■■□□□ 1.22
SMN2-213ENST00000614240 MYO1BO43795 1136 aa22.64■■□□□ 1.21
SMN2-213ENST00000614240 TM4SF4P48230 202 aa22.64■■□□□ 1.21
SMN2-213ENST00000614240 LDHAL6AQ6ZMR3 332 aa22.64■■□□□ 1.21
SMN2-213ENST00000614240 ZBED3Q96IU2 234 aaPredicted RBP22.64■■□□□ 1.21
SMN2-213ENST00000614240 DEFB129Q9H1M3 183 aa22.64■■□□□ 1.21
SMN2-213ENST00000614240 CNNM1Q9NRU3 951 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms