RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ALDH1L1O75891 902 aa25.91■■□□□ 1.74
POLR2J3-220ENST00000613744 NBPF7P0C2Y1 421 aaPredicted RBP25.91■■□□□ 1.74
POLR2J3-220ENST00000613744 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
POLR2J3-220ENST00000613744 F13A1P00488 732 aa25.9■■□□□ 1.74
POLR2J3-220ENST00000613744 UBTFL1P0CB47 393 aaPredicted RBP25.9■■□□□ 1.74
POLR2J3-220ENST00000613744 CCDC191Q8NCU4 936 aa25.9■■□□□ 1.74
POLR2J3-220ENST00000613744 STAP2Q9UGK3 403 aa25.9■■□□□ 1.74
POLR2J3-220ENST00000613744 AP5Z1O43299 807 aa25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 STX6O43752 255 aa25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 GNAI3P08754 354 aa25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 HSPA4P34932 840 aa25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 FAM89AQ96GI7 184 aa25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 QSER1Q2KHR3 1735 aa25.89■■□□□ 1.74
POLR2J3-220ENST00000613744 ZBTB7AO95365 584 aa25.89■■□□□ 1.73
POLR2J3-220ENST00000613744 SLFN14P0C7P3 912 aa25.89■■□□□ 1.73
POLR2J3-220ENST00000613744 CCDC24Q8N4L8 307 aa25.89■■□□□ 1.73
POLR2J3-220ENST00000613744 FAM200AQ8TCP9 573 aa25.89■■□□□ 1.73
POLR2J3-220ENST00000613744 N4BP2Q86UW6 1770 aaPredicted RBP25.89■■□□□ 1.73
POLR2J3-220ENST00000613744 UBE3BQ7Z3V4 1068 aa25.88■■□□□ 1.73
POLR2J3-220ENST00000613744 NUTM1Q86Y26 1132 aa25.88■■□□□ 1.73
POLR2J3-220ENST00000613744 TRMT112Q9UI30 125 aaKnown RBP25.88■■□□□ 1.73
POLR2J3-220ENST00000613744 PDIA4P13667 645 aaKnown RBP25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 TRIM28Q13263 835 aaKnown RBP25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 APBB1O00213 710 aa25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 GRM8O00222 908 aa25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 SOCS7O14512 581 aa25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 GNAI2P04899 355 aa25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 NLGN1Q8N2Q7 840 aa25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 LRRFIP2Q9Y608 721 aaKnown RBP25.87■■□□□ 1.73
POLR2J3-220ENST00000613744 TM4SF1P30408 202 aa25.86■■□□□ 1.73
POLR2J3-220ENST00000613744 DDR1Q08345 913 aa25.86■■□□□ 1.73
POLR2J3-220ENST00000613744 GIMAP6Q6P9H5 292 aa25.86■■□□□ 1.73
POLR2J3-220ENST00000613744 MMP10P09238 476 aa25.85■■□□□ 1.73
POLR2J3-220ENST00000613744 PLCB2Q00722 1185 aa25.85■■□□□ 1.73
POLR2J3-220ENST00000613744 UTP14AQ9BVJ6 771 aaKnown RBP25.85■■□□□ 1.73
POLR2J3-220ENST00000613744 LRRCC1Q9C099 1032 aa25.85■■□□□ 1.73
POLR2J3-220ENST00000613744 SYT1P21579 422 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 FOXD4L6Q3SYB3 417 aaPredicted RBP25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 PARP10Q53GL7 1025 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 FOXD4L3Q6VB84 417 aaPredicted RBP25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 NOL8Q76FK4 1167 aaKnown RBP25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 NBPF5PQ86XG9 351 aaPredicted RBP25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 ATF5Q9Y2D1 282 aaPredicted RBP25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 RGL2O15211 777 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 NPHP1O15259 732 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 PPP1R42Q7Z4L9 355 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 KRT222Q8N1A0 295 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 CCDC112Q8NEF3 446 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 KIF18AQ8NI77 898 aa25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 UPF3BQ9BZI7 483 aaKnown RBP25.84■■□□□ 1.73
POLR2J3-220ENST00000613744 NTSR2O95665 410 aa25.83■■□□□ 1.73
POLR2J3-220ENST00000613744 SLC20A2Q08357 652 aa25.83■■□□□ 1.73
POLR2J3-220ENST00000613744 TTC14Q96N46 770 aa25.83■■□□□ 1.73
POLR2J3-220ENST00000613744 PTGS1P23219 599 aa25.83■■□□□ 1.72
POLR2J3-220ENST00000613744 TERF2Q15554 542 aa25.83■■□□□ 1.72
POLR2J3-220ENST00000613744 ZBTB38Q8NAP3 1195 aaPredicted RBP25.83■■□□□ 1.72
POLR2J3-220ENST00000613744 SPC24Q8NBT2 197 aa25.83■■□□□ 1.72
POLR2J3-220ENST00000613744 LIMCH1Q9UPQ0 1083 aa25.83■■□□□ 1.72
POLR2J3-220ENST00000613744 CARMIL3Q8ND23 1372 aa25.82■■□□□ 1.72
POLR2J3-220ENST00000613744 H7C1W4 665 aa25.82■■□□□ 1.72
POLR2J3-220ENST00000613744 POLRMTO00411 1230 aaKnown RBP25.82■■□□□ 1.72
POLR2J3-220ENST00000613744 PDE4CQ08493 712 aa25.82■■□□□ 1.72
POLR2J3-220ENST00000613744 SERPINB2P05120 415 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 TNNT1P13805 278 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 ERFEQ4G0M1 354 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 ZNF397Q8NF99 534 aaPredicted RBP25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 SUCLG2Q96I99 432 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 FAM53CQ9NYF3 392 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 SMC3Q9UQE7 1217 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 PCCAP05165 728 aaPredicted RBP25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 CASP7P55210 303 aa25.81■■□□□ 1.72
POLR2J3-220ENST00000613744 FIBPO43427 364 aa25.8■■□□□ 1.72
POLR2J3-220ENST00000613744 CCDC171Q6TFL3 1326 aa25.8■■□□□ 1.72
POLR2J3-220ENST00000613744 SH3TC1Q8TE82 1336 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 RAD50Q92878 1312 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 CASZ1Q86V15 1759 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 SLFNL1Q499Z3 407 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 TPTE2Q6XPS3 522 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 SLC16A10Q8TF71 515 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 PARP3Q9Y6F1 533 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 UTYO14607 1347 aa25.79■■□□□ 1.72
POLR2J3-220ENST00000613744 TRIM6-TRIM34B2RNG4 842 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 IRS4O14654 1257 aaPredicted RBP25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 MAP3K11Q16584 847 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 EPHA10Q5JZY3 1008 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 KAZALD1Q96I82 304 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 ELP1O95163 1332 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 CNBD1Q8NA66 436 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 RILPL2Q969X0 211 aa25.78■■□□□ 1.72
POLR2J3-220ENST00000613744 CDC25BP30305 580 aa25.77■■□□□ 1.72
POLR2J3-220ENST00000613744 PRR5LQ6MZQ0 368 aa25.77■■□□□ 1.72
POLR2J3-220ENST00000613744 PLA2G4DQ86XP0 818 aa25.77■■□□□ 1.72
POLR2J3-220ENST00000613744 CCDC85AQ96PX6 553 aaPredicted RBP25.77■■□□□ 1.72
POLR2J3-220ENST00000613744 NYXQ9GZU5 481 aa25.77■■□□□ 1.72
POLR2J3-220ENST00000613744 COL24A1Q17RW2 1714 aa25.77■■□□□ 1.72
POLR2J3-220ENST00000613744 IGSF3O75054 1194 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 ZSCAN25Q6NSZ9 544 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 CCDC186Q7Z3E2 898 aa25.76■■□□□ 1.71
POLR2J3-220ENST00000613744 TIGD1Q96MW7 591 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms