RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
NEK3-206ENST00000611833 EXOSC10Q01780 885 aaKnown RBP20.29■□□□□ 0.84
NEK3-206ENST00000611833 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
NEK3-206ENST00000611833 XAGE2Q96GT9 111 aa20.29■□□□□ 0.84
NEK3-206ENST00000611833 TEX13AQ9BXU3 409 aaPredicted RBP20.29■□□□□ 0.84
NEK3-206ENST00000611833 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
NEK3-206ENST00000611833 MRVI1Q9Y6F6 885 aa20.29■□□□□ 0.84
NEK3-206ENST00000611833 AP5Z1O43299 807 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 HMGN5P82970 282 aaKnown RBP20.28■□□□□ 0.84
NEK3-206ENST00000611833 TTC39AQ5SRH9 613 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 ZBTB38Q8NAP3 1195 aaPredicted RBP20.28■□□□□ 0.84
NEK3-206ENST00000611833 NSUN7Q8NE18 718 aaKnown RBP20.28■□□□□ 0.84
NEK3-206ENST00000611833 PIBF1Q8WXW3 757 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 OSBP2Q969R2 916 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 PGBD1Q96JS3 809 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 AGXT2Q9BYV1 514 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 FBXO3Q9UK99 471 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 NHSL1Q5SYE7 1610 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 UQCRHLA0A096LP55 91 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 CSF1RP07333 972 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 UQCRHP07919 91 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 FOSBP53539 338 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 CCT2P78371 535 aaKnown RBP20.28■□□□□ 0.84
NEK3-206ENST00000611833 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
NEK3-206ENST00000611833 CLSTN2Q9H4D0 955 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 AKAP2Q9Y2D5 859 aa20.28■□□□□ 0.84
NEK3-206ENST00000611833 PTPDC1A2A3K4 754 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 NR1I2O75469 434 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 SYNE4Q8N205 404 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 ITGB4P16144 1822 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 CEBPZQ03701 1054 aaKnown RBP20.27■□□□□ 0.84
NEK3-206ENST00000611833 SCARF1Q14162 830 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 SASS6Q6UVJ0 657 aa20.27■□□□□ 0.84
NEK3-206ENST00000611833 MAP3K15Q6ZN16 1313 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 CTDNEP1O95476 244 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 STARD3NLO95772 234 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
NEK3-206ENST00000611833 NOLC1Q14978 699 aaKnown RBP eCLIP20.26■□□□□ 0.83
NEK3-206ENST00000611833 TTLL5Q6EMB2 1281 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 NAA16Q6N069 864 aaPredicted RBP20.26■□□□□ 0.83
NEK3-206ENST00000611833 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
NEK3-206ENST00000611833 BTG4Q9NY30 223 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.26■□□□□ 0.83
NEK3-206ENST00000611833 HLFQ16534 295 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 ANO6Q4KMQ2 910 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
NEK3-206ENST00000611833 GOLGA6L6A8MZA4 724 aa20.25■□□□□ 0.83
NEK3-206ENST00000611833 FOXP2O15409 715 aa20.25■□□□□ 0.83
NEK3-206ENST00000611833 LUZP1Q86V48 1076 aa20.25■□□□□ 0.83
NEK3-206ENST00000611833 SPC24Q8NBT2 197 aa20.25■□□□□ 0.83
NEK3-206ENST00000611833 NCOA5Q9HCD5 579 aaKnown RBP20.25■□□□□ 0.83
NEK3-206ENST00000611833 TPM3P06753 285 aa20.25■□□□□ 0.83
NEK3-206ENST00000611833 GPTP24298 496 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 RBM43Q6ZSC3 357 aaKnown RBP20.24■□□□□ 0.83
NEK3-206ENST00000611833 CHMP4CQ96CF2 233 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 ZNF274Q96GC6 653 aaPredicted RBP20.24■□□□□ 0.83
NEK3-206ENST00000611833 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 RIC1Q4ADV7 1423 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 NWD2Q9ULI1 1742 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 PDIA3P30101 505 aaKnown RBP20.24■□□□□ 0.83
NEK3-206ENST00000611833 ZAP70P43403 619 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 CBX8Q9HC52 389 aa20.24■□□□□ 0.83
NEK3-206ENST00000611833 ZFYP08048 801 aaPredicted RBP20.23■□□□□ 0.83
NEK3-206ENST00000611833 PI16Q6UXB8 463 aa20.23■□□□□ 0.83
NEK3-206ENST00000611833 NLRP10Q86W26 655 aa20.23■□□□□ 0.83
NEK3-206ENST00000611833 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
NEK3-206ENST00000611833 PPFIA3O75145 1194 aa20.22■□□□□ 0.83
NEK3-206ENST00000611833 C17orf53Q8N3J3 647 aaPredicted RBP20.22■□□□□ 0.83
NEK3-206ENST00000611833 TTLL11Q8NHH1 800 aa20.22■□□□□ 0.83
NEK3-206ENST00000611833 RIPOR2Q9Y4F9 1068 aa20.22■□□□□ 0.83
NEK3-206ENST00000611833 IMMTQ16891 758 aaKnown RBP20.22■□□□□ 0.83
NEK3-206ENST00000611833 GREM2Q9H772 168 aa20.22■□□□□ 0.83
NEK3-206ENST00000611833 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
NEK3-206ENST00000611833 BCL9O00512 1426 aa20.22■□□□□ 0.83
NEK3-206ENST00000611833 ITGA6P23229 1130 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 ADD1P35611 737 aaKnown RBP20.21■□□□□ 0.83
NEK3-206ENST00000611833 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
NEK3-206ENST00000611833 DISP2A7MBM2 1401 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 LRP6O75581 1613 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 CYP19A1P11511 503 aaPredicted RBP20.21■□□□□ 0.83
NEK3-206ENST00000611833 HAND2P61296 217 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 RBM10P98175 930 aaKnown RBP20.21■□□□□ 0.83
NEK3-206ENST00000611833 ATP2B3Q16720 1220 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 HSP90AB3PQ58FF7 597 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 PUS7LQ9H0K6 701 aaKnown RBP20.21■□□□□ 0.83
NEK3-206ENST00000611833 RCOR1Q9UKL0 485 aa20.21■□□□□ 0.83
NEK3-206ENST00000611833 GUCY1B3Q02153 619 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 METTL24Q5JXM2 366 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 LDHAL6AQ6ZMR3 332 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 MYH15Q9Y2K3 1946 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 ZNF165P49910 485 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
NEK3-206ENST00000611833 APPBP2Q92624 585 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 FTOQ9C0B1 505 aaKnown RBP eCLIP20.2■□□□□ 0.82
NEK3-206ENST00000611833 ZBTB1Q9Y2K1 713 aa20.2■□□□□ 0.82
NEK3-206ENST00000611833 ABCC12Q96J65 1359 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms