RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 MAP3K2Q9Y2U5 619 aa22.42■■□□□ 1.18
MUC1-224ENST00000611577 PI4KAP2A4QPH2 592 aa22.41■■□□□ 1.18
MUC1-224ENST00000611577 PDE8AO60658 829 aa22.41■■□□□ 1.18
MUC1-224ENST00000611577 PCCAP05165 728 aaPredicted RBP22.41■■□□□ 1.18
MUC1-224ENST00000611577 NEXNQ0ZGT2 675 aa22.41■■□□□ 1.18
MUC1-224ENST00000611577 PI4KAP1Q8N8J0 262 aa22.41■■□□□ 1.18
MUC1-224ENST00000611577 CCDC191Q8NCU4 936 aa22.41■■□□□ 1.18
MUC1-224ENST00000611577 JARID2Q92833 1246 aaPredicted RBP22.41■■□□□ 1.18
MUC1-224ENST00000611577 YTHDC1Q96MU7 727 aaKnown RBP22.41■■□□□ 1.18
MUC1-224ENST00000611577 SMC4Q9NTJ3 1288 aa22.41■■□□□ 1.18
MUC1-224ENST00000611577 CWC25Q9NXE8 425 aaPredicted RBP22.41■■□□□ 1.18
MUC1-224ENST00000611577 XDHP47989 1333 aa22.4■■□□□ 1.18
MUC1-224ENST00000611577 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
MUC1-224ENST00000611577 RASAL3Q86YV0 1011 aa22.39■■□□□ 1.17
MUC1-224ENST00000611577 ANKRD18AQ8IVF6 992 aa22.39■■□□□ 1.17
MUC1-224ENST00000611577 CSRNP1Q96S65 589 aa22.39■■□□□ 1.17
MUC1-224ENST00000611577 USP17L8P0C7I0 530 aa22.38■■□□□ 1.17
MUC1-224ENST00000611577 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
MUC1-224ENST00000611577 MYOZ2Q9NPC6 264 aa22.38■■□□□ 1.17
MUC1-224ENST00000611577 PSME4Q14997 1843 aa22.37■■□□□ 1.17
MUC1-224ENST00000611577 ATP2B4P23634 1241 aa22.37■■□□□ 1.17
MUC1-224ENST00000611577 SSH1Q8WYL5 1049 aa22.37■■□□□ 1.17
MUC1-224ENST00000611577 GMLQ99445 158 aa22.37■■□□□ 1.17
MUC1-224ENST00000611577 PAPPA2Q9BXP8 1791 aa22.37■■□□□ 1.17
MUC1-224ENST00000611577 AKAP11Q9UKA4 1901 aa22.37■■□□□ 1.17
MUC1-224ENST00000611577 USP17L3A6NCW0 530 aa22.36■■□□□ 1.17
MUC1-224ENST00000611577 USP17L4A6NCW7 530 aa22.36■■□□□ 1.17
MUC1-224ENST00000611577 SOX10P56693 466 aa22.36■■□□□ 1.17
MUC1-224ENST00000611577 FKBP1BP68106 108 aa22.36■■□□□ 1.17
MUC1-224ENST00000611577 USP17L1Q7RTZ2 530 aa22.36■■□□□ 1.17
MUC1-224ENST00000611577 MRPL50Q8N5N7 158 aaKnown RBP22.36■■□□□ 1.17
MUC1-224ENST00000611577 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
MUC1-224ENST00000611577 TNRC18O15417 2968 aaPredicted RBP22.35■■□□□ 1.17
MUC1-224ENST00000611577 PITPNM2Q9BZ72 1349 aa22.35■■□□□ 1.17
MUC1-224ENST00000611577 PODNQ7Z5L7 613 aa22.35■■□□□ 1.17
MUC1-224ENST00000611577 REM2Q8IYK8 340 aaPredicted RBP22.35■■□□□ 1.17
MUC1-224ENST00000611577 SCAF8Q9UPN6 1271 aaKnown RBP22.35■■□□□ 1.17
MUC1-224ENST00000611577 CTU1Q7Z7A3 348 aaKnown RBP22.34■■□□□ 1.17
MUC1-224ENST00000611577 CDC5LQ99459 802 aaKnown RBP22.34■■□□□ 1.17
MUC1-224ENST00000611577 PDE4DIPQ5VU43 2346 aa22.34■■□□□ 1.17
MUC1-224ENST00000611577 CTSWP56202 376 aa22.33■■□□□ 1.17
MUC1-224ENST00000611577 MOB2Q70IA6 237 aa22.33■■□□□ 1.17
MUC1-224ENST00000611577 MED23Q9ULK4 1368 aa22.33■■□□□ 1.17
MUC1-224ENST00000611577 PTPRCP08575 1304 aa22.32■■□□□ 1.16
MUC1-224ENST00000611577 F6X3S4 739 aa22.32■■□□□ 1.16
MUC1-224ENST00000611577 SLC4A10Q6U841 1118 aa22.32■■□□□ 1.16
MUC1-224ENST00000611577 FBXW7Q969H0 707 aa22.32■■□□□ 1.16
MUC1-224ENST00000611577 WTIPA6NIX2 430 aaPredicted RBP22.31■■□□□ 1.16
MUC1-224ENST00000611577 RARSP54136 660 aaKnown RBP22.31■■□□□ 1.16
MUC1-224ENST00000611577 UBE2Q2LH0YL09 131 aa22.3■■□□□ 1.16
MUC1-224ENST00000611577 TTLL12Q14166 644 aaPredicted RBP22.3■■□□□ 1.16
MUC1-224ENST00000611577 NBPF9Q3BBW0 867 aa22.3■■□□□ 1.16
MUC1-224ENST00000611577 PRAMEF18Q5VWM3 479 aa22.3■■□□□ 1.16
MUC1-224ENST00000611577 MXD3Q9BW11 206 aa22.3■■□□□ 1.16
MUC1-224ENST00000611577 GREM2Q9H772 168 aa22.3■■□□□ 1.16
MUC1-224ENST00000611577 MINPP1Q9UNW1 487 aa22.3■■□□□ 1.16
MUC1-224ENST00000611577 IGKV5-2P06315 115 aa22.29■■□□□ 1.16
MUC1-224ENST00000611577 CWF19L2Q2TBE0 894 aaKnown RBP22.29■■□□□ 1.16
MUC1-224ENST00000611577 DACT2Q5SW24 774 aa22.29■■□□□ 1.16
MUC1-224ENST00000611577 TTLL11Q8NHH1 800 aa22.29■■□□□ 1.16
MUC1-224ENST00000611577 BSDC1Q9NW68 430 aaPredicted RBP22.29■■□□□ 1.16
MUC1-224ENST00000611577 SPEF2Q9C093 1822 aa22.29■■□□□ 1.16
MUC1-224ENST00000611577 KIF16BQ96L93 1317 aa22.29■■□□□ 1.16
MUC1-224ENST00000611577 NEURL1BA8MQ27 555 aa22.28■■□□□ 1.16
MUC1-224ENST00000611577 CCT4P50991 539 aaKnown RBP22.28■■□□□ 1.16
MUC1-224ENST00000611577 OGFOD1Q8N543 542 aa22.28■■□□□ 1.16
MUC1-224ENST00000611577 LINS1Q8NG48 757 aa22.28■■□□□ 1.16
MUC1-224ENST00000611577 HDAC9Q9UKV0 1011 aa22.27■■□□□ 1.16
MUC1-224ENST00000611577 NOB1Q9ULX3 412 aaKnown RBP22.27■■□□□ 1.16
MUC1-224ENST00000611577 MYO3BQ8WXR4 1341 aa22.27■■□□□ 1.16
MUC1-224ENST00000611577 SASH1O94885 1247 aa22.26■■□□□ 1.15
MUC1-224ENST00000611577 TBC1D8O95759 1140 aa22.26■■□□□ 1.15
MUC1-224ENST00000611577 STRIP1Q5VSL9 837 aa22.26■■□□□ 1.15
MUC1-224ENST00000611577 COA1Q9GZY4 146 aa22.26■■□□□ 1.15
MUC1-224ENST00000611577 HPS5Q9UPZ3 1129 aa22.26■■□□□ 1.15
MUC1-224ENST00000611577 WNT10BO00744 389 aa22.25■■□□□ 1.15
MUC1-224ENST00000611577 IPO8O15397 1037 aaKnown RBP22.25■■□□□ 1.15
MUC1-224ENST00000611577 NF2P35240 595 aa22.25■■□□□ 1.15
MUC1-224ENST00000611577 ZNF296Q8WUU4 475 aaPredicted RBP22.25■■□□□ 1.15
MUC1-224ENST00000611577 FRAT1Q92837 279 aaPredicted RBP22.25■■□□□ 1.15
MUC1-224ENST00000611577 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
MUC1-224ENST00000611577 SRCIN1Q9C0H9 1055 aa22.25■■□□□ 1.15
MUC1-224ENST00000611577 MYH3P11055 1940 aa22.25■■□□□ 1.15
MUC1-224ENST00000611577 ZNF646O15015 1829 aaPredicted RBP22.24■■□□□ 1.15
MUC1-224ENST00000611577 IGHMBP2P38935 993 aaKnown RBP22.24■■□□□ 1.15
MUC1-224ENST00000611577 MKRN3Q13064 507 aaKnown RBP22.24■■□□□ 1.15
MUC1-224ENST00000611577 BCAR3O75815 825 aa22.23■■□□□ 1.15
MUC1-224ENST00000611577 GCKRQ14397 625 aa22.23■■□□□ 1.15
MUC1-224ENST00000611577 BEND3Q5T5X7 828 aa22.23■■□□□ 1.15
MUC1-224ENST00000611577 UBE3BQ7Z3V4 1068 aa22.23■■□□□ 1.15
MUC1-224ENST00000611577 TXNRD3Q86VQ6 643 aa22.23■■□□□ 1.15
MUC1-224ENST00000611577 LEMD3Q9Y2U8 911 aa22.23■■□□□ 1.15
MUC1-224ENST00000611577 PKN2Q16513 984 aaKnown RBP22.22■■□□□ 1.15
MUC1-224ENST00000611577 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
MUC1-224ENST00000611577 KLRK1P26718 216 aa22.21■■□□□ 1.15
MUC1-224ENST00000611577 TM4SF4P48230 202 aa22.21■■□□□ 1.15
MUC1-224ENST00000611577 PRKG1Q13976 671 aa22.21■■□□□ 1.15
MUC1-224ENST00000611577 APOBEC3FQ8IUX4 373 aaKnown RBP22.21■■□□□ 1.15
MUC1-224ENST00000611577 KIAA0825Q8IV33 1275 aa22.21■■□□□ 1.15
MUC1-224ENST00000611577 C9orf78Q9NZ63 289 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms