RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 GPAA1O43292 621 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 ISM2Q6H9L7 571 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 LPIN2Q92539 896 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 ARMT1Q9H993 441 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-218ENST00000610726 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 KIDINS220Q9ULH0 1771 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 SLC27A2O14975 620 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 UFL1O94874 794 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 HIBADHP31937 336 aaKnown RBP8.44□□□□□ -1.06
CSDE1-218ENST00000610726 UBE2HP62256 183 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 GIMAP6Q6P9H5 292 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 USP48Q86UV5 1035 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 PIGBQ92521 554 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 PUS3Q9BZE2 481 aaKnown RBP8.44□□□□□ -1.06
CSDE1-218ENST00000610726 USP25Q9UHP3 1055 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 B4E1Z4 1266 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 PRDM1O75626 825 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 CNNM3Q8NE01 707 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 APPBP2Q92624 585 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 SEC62Q99442 399 aaKnown RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 FEZ1Q99689 392 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 HELLSQ9NRZ9 838 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 A0A0U1RQG5 324 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 F13A1P00488 732 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 CRKLP46109 303 aaKnown RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 CTSWP56202 376 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 CFAP100Q494V2 611 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 TMTC2Q8N394 836 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 ZBTB38Q8NAP3 1195 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 AOX1Q06278 1338 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 TULP4Q9NRJ4 1543 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 APBA3O96018 575 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 ATP5JP18859 108 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 SYT1P21579 422 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 TRMT1LQ7Z2T5 733 aaKnown RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 UNC5CLQ8IV45 518 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 TANGO6Q9C0B7 1094 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 ZSCAN16Q9H4T2 348 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 PTPDC1A2A3K4 754 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 GNAT2P19087 354 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 RPS8P62241 208 aaKnown RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 GIGYF2Q6Y7W6 1299 aaKnown RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 GREM2Q9H772 168 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 DDX19AQ9NUU7 478 aaKnown RBP8.43□□□□□ -1.06
CSDE1-218ENST00000610726 MAP3K15Q6ZN16 1313 aa8.43□□□□□ -1.06
CSDE1-218ENST00000610726 IBTKQ9P2D0 1353 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 ESPNB1AK53 854 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 PCCAP05165 728 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 MARCKSP29966 332 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 RAB3GAP1Q15042 981 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 NCOA5Q9HCD5 579 aaKnown RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 ANO10Q9NW15 660 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 DENND2AQ9ULE3 1009 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 CAMSAP1Q5T5Y3 1602 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 A0A0D9SFI3 127 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 PPFIBP1Q86W92 1011 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 PNPLA6Q8IY17 1366 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 MNS1Q8NEH6 495 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 ARHGEF40Q8TER5 1519 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 CLTCQ00610 1675 aaKnown RBP8.42□□□□□ -1.06
CSDE1-218ENST00000610726 TMEM132AQ24JP5 1023 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 FAM173BQ6P4H8 233 aa8.42□□□□□ -1.06
CSDE1-218ENST00000610726 RPS6KB1P23443 525 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 INTS4Q96HW7 963 aaKnown RBP8.41□□□□□ -1.06
CSDE1-218ENST00000610726 QTRT2Q9H974 415 aaKnown RBP8.41□□□□□ -1.06
CSDE1-218ENST00000610726 COPRSQ9NQ92 184 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 PTPRMP28827 1452 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 ZNF532Q9HCE3 1301 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 DCAF8L1A6NGE4 600 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 PTH1RQ03431 593 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 RBM26Q5T8P6 1007 aaKnown RBP8.41□□□□□ -1.06
CSDE1-218ENST00000610726 SPATA5Q8NB90 893 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 DACT1Q9NYF0 836 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 DBNLQ9UJU6 430 aaKnown RBP8.41□□□□□ -1.06
CSDE1-218ENST00000610726 SMTNL1A8MU46 457 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 ZNF165P49910 485 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 SMARCE1Q969G3 411 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 RBM17Q96I25 401 aaKnown RBP8.41□□□□□ -1.06
CSDE1-218ENST00000610726 VEZTQ9HBM0 779 aa8.41□□□□□ -1.06
CSDE1-218ENST00000610726 CPSF1Q10570 1443 aaKnown RBP8.41□□□□□ -1.06
CSDE1-218ENST00000610726 HSPA4P34932 840 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 UBA7P41226 1012 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 GYG1P46976 350 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 WDR78Q5VTH9 848 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 AATFQ9NY61 560 aaKnown RBP eCLIP8.4□□□□□ -1.06
CSDE1-218ENST00000610726 SAP30BPQ9UHR5 308 aaKnown RBP8.4□□□□□ -1.06
CSDE1-218ENST00000610726 ADAMTS13Q76LX8 1427 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 IL6STP40189 918 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-218ENST00000610726 BCAMP50895 628 aa8.4□□□□□ -1.06
CSDE1-218ENST00000610726 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-218ENST00000610726 MSL1Q68DK7 614 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms