RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 UBE4AQ14139 1066 aa28.14■■■□□ 2.1
IRF3-227ENST00000600911 TBC1D16Q8TBP0 767 aa28.14■■■□□ 2.1
IRF3-227ENST00000600911 STAP2Q9UGK3 403 aa28.14■■■□□ 2.1
IRF3-227ENST00000600911 UFL1O94874 794 aa28.14■■■□□ 2.09
IRF3-227ENST00000600911 FER1L6Q2WGJ9 1857 aa28.13■■■□□ 2.09
IRF3-227ENST00000600911 SLC5A1P13866 664 aa28.13■■■□□ 2.09
IRF3-227ENST00000600911 PHKA1P46020 1223 aa28.13■■■□□ 2.09
IRF3-227ENST00000600911 OSBPL3Q9H4L5 887 aa28.13■■■□□ 2.09
IRF3-227ENST00000600911 GSPT1P15170 499 aaKnown RBP28.12■■■□□ 2.09
IRF3-227ENST00000600911 GYG1P46976 350 aa28.12■■■□□ 2.09
IRF3-227ENST00000600911 BCAMP50895 628 aa28.12■■■□□ 2.09
IRF3-227ENST00000600911 DALRD3Q5D0E6 543 aaKnown RBP28.12■■■□□ 2.09
IRF3-227ENST00000600911 MPNDQ8N594 471 aa28.12■■■□□ 2.09
IRF3-227ENST00000600911 NDUFB9Q9Y6M9 179 aa28.12■■■□□ 2.09
IRF3-227ENST00000600911 UTRNP46939 3433 aa28.12■■■□□ 2.09
IRF3-227ENST00000600911 SCARF1Q14162 830 aa28.11■■■□□ 2.09
IRF3-227ENST00000600911 GGA1Q9UJY5 639 aa28.11■■■□□ 2.09
IRF3-227ENST00000600911 LEMD3Q9Y2U8 911 aa28.11■■■□□ 2.09
IRF3-227ENST00000600911 CHD4Q14839 1912 aa28.11■■■□□ 2.09
IRF3-227ENST00000600911 IFIT1P09914 478 aaKnown RBP28.1■■■□□ 2.09
IRF3-227ENST00000600911 KCNJ4P48050 445 aa28.1■■■□□ 2.09
IRF3-227ENST00000600911 ECHDC1Q9NTX5 307 aa28.1■■■□□ 2.09
IRF3-227ENST00000600911 BCS1LQ9Y276 419 aa28.1■■■□□ 2.09
IRF3-227ENST00000600911 ATP2B4P23634 1241 aa28.1■■■□□ 2.09
IRF3-227ENST00000600911 CCDC102BQ68D86 513 aa28.1■■■□□ 2.09
IRF3-227ENST00000600911 DPP8Q6V1X1 898 aaPredicted RBP28.1■■■□□ 2.09
IRF3-227ENST00000600911 FAM84BQ96KN1 310 aaPredicted RBP28.1■■■□□ 2.09
IRF3-227ENST00000600911 MYO5AQ9Y4I1 1855 aaKnown RBP28.1■■■□□ 2.09
IRF3-227ENST00000600911 MYH13Q9UKX3 1938 aa28.09■■■□□ 2.09
IRF3-227ENST00000600911 COL1A1P02452 1464 aaPredicted RBP28.09■■■□□ 2.09
IRF3-227ENST00000600911 MAP4K4O95819 1239 aaPredicted RBP28.08■■■□□ 2.09
IRF3-227ENST00000600911 TTC22Q5TAA0 569 aa28.08■■■□□ 2.09
IRF3-227ENST00000600911 PI16Q6UXB8 463 aa28.08■■■□□ 2.09
IRF3-227ENST00000600911 TTC41PQ6P2S7 1318 aa28.08■■■□□ 2.09
IRF3-227ENST00000600911 C6orf229H3BNL8 230 aa28.07■■■□□ 2.08
IRF3-227ENST00000600911 BOLA2Q9H3K6 86 aa28.07■■■□□ 2.08
IRF3-227ENST00000600911 EDC3Q96F86 508 aaKnown RBP28.07■■■□□ 2.08
IRF3-227ENST00000600911 IQSEC3Q9UPP2 1182 aaPredicted RBP28.07■■■□□ 2.08
IRF3-227ENST00000600911 COL4A5P29400 1685 aa28.06■■■□□ 2.08
IRF3-227ENST00000600911 AK9Q5TCS8 1911 aa28.06■■■□□ 2.08
IRF3-227ENST00000600911 RIMBP2O15034 1052 aa28.06■■■□□ 2.08
IRF3-227ENST00000600911 CCDC93Q567U6 631 aa28.06■■■□□ 2.08
IRF3-227ENST00000600911 FBXO33Q7Z6M2 555 aa28.06■■■□□ 2.08
IRF3-227ENST00000600911 ATP5JP18859 108 aa28.05■■■□□ 2.08
IRF3-227ENST00000600911 MCAMP43121 646 aa28.05■■■□□ 2.08
IRF3-227ENST00000600911 GORABQ5T7V8 394 aa28.05■■■□□ 2.08
IRF3-227ENST00000600911 RTFDC1Q9BY42 306 aaPredicted RBP28.05■■■□□ 2.08
IRF3-227ENST00000600911 AOX1Q06278 1338 aa28.05■■■□□ 2.08
IRF3-227ENST00000600911 MED23Q9ULK4 1368 aa28.05■■■□□ 2.08
IRF3-227ENST00000600911 TTC39AQ5SRH9 613 aa28.04■■■□□ 2.08
IRF3-227ENST00000600911 C15orf52Q6ZUT6 534 aaKnown RBP28.04■■■□□ 2.08
IRF3-227ENST00000600911 SNRKQ9NRH2 765 aa28.04■■■□□ 2.08
IRF3-227ENST00000600911 ARID4AP29374 1257 aaPredicted RBP28.03■■■□□ 2.08
IRF3-227ENST00000600911 CCDC158Q5M9N0 1113 aa28.03■■■□□ 2.08
IRF3-227ENST00000600911 ZNF646O15015 1829 aaPredicted RBP28.02■■■□□ 2.08
IRF3-227ENST00000600911 CCDC88AQ3V6T2 1871 aa28.02■■■□□ 2.08
IRF3-227ENST00000600911 SCN9AQ15858 1988 aa28.02■■■□□ 2.08
IRF3-227ENST00000600911 NFKBIEO00221 500 aa28.02■■■□□ 2.08
IRF3-227ENST00000600911 RASGRF1Q13972 1273 aa28.02■■■□□ 2.08
IRF3-227ENST00000600911 CC2D2BQ6DHV5 1058 aa28.02■■■□□ 2.08
IRF3-227ENST00000600911 GLRX3O76003 335 aaKnown RBP28.01■■■□□ 2.07
IRF3-227ENST00000600911 GPATCH3Q96I76 525 aa28.01■■■□□ 2.07
IRF3-227ENST00000600911 TMX4Q9H1E5 349 aaPredicted RBP28.01■■■□□ 2.07
IRF3-227ENST00000600911 YBX3P16989 372 aaKnown RBP eCLIP28■■■□□ 2.07
IRF3-227ENST00000600911 HIBADHP31937 336 aaKnown RBP28■■■□□ 2.07
IRF3-227ENST00000600911 PRELPP51888 382 aa28■■■□□ 2.07
IRF3-227ENST00000600911 ANTXR1Q9H6X2 564 aa28■■■□□ 2.07
IRF3-227ENST00000600911 HMG20BQ9P0W2 317 aa28■■■□□ 2.07
IRF3-227ENST00000600911 SDSP20132 328 aa28■■■□□ 2.07
IRF3-227ENST00000600911 ZAP70P43403 619 aa28■■■□□ 2.07
IRF3-227ENST00000600911 AOC3Q16853 763 aa28■■■□□ 2.07
IRF3-227ENST00000600911 DNAJC2Q99543 621 aaKnown RBP28■■■□□ 2.07
IRF3-227ENST00000600911 HAUS7Q99871 368 aa28■■■□□ 2.07
IRF3-227ENST00000600911 RASSF7Q02833 373 aa27.99■■■□□ 2.07
IRF3-227ENST00000600911 DOK7Q18PE1 504 aa27.99■■■□□ 2.07
IRF3-227ENST00000600911 WASHC4Q2M389 1173 aa27.99■■■□□ 2.07
IRF3-227ENST00000600911 CAVIN4Q5BKX8 364 aa27.99■■■□□ 2.07
IRF3-227ENST00000600911 RTKN2Q8IZC4 609 aa27.99■■■□□ 2.07
IRF3-227ENST00000600911 ZNF512BQ96KM6 892 aaPredicted RBP27.99■■■□□ 2.07
IRF3-227ENST00000600911 ZNF277Q9NRM2 450 aaPredicted RBP27.99■■■□□ 2.07
IRF3-227ENST00000600911 ERC2O15083 957 aa27.98■■■□□ 2.07
IRF3-227ENST00000600911 PSMD1Q99460 953 aa27.98■■■□□ 2.07
IRF3-227ENST00000600911 CD209Q9NNX6 404 aa27.98■■■□□ 2.07
IRF3-227ENST00000600911 JAG2Q9Y219 1238 aa27.98■■■□□ 2.07
IRF3-227ENST00000600911 DOCK2Q92608 1830 aa27.97■■■□□ 2.07
IRF3-227ENST00000600911 FKBP4Q02790 459 aaKnown RBP eCLIP27.97■■■□□ 2.07
IRF3-227ENST00000600911 BMP2KLQ5H9B9 411 aa27.97■■■□□ 2.07
IRF3-227ENST00000600911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.97■■■□□ 2.07
IRF3-227ENST00000600911 CHGBP05060 677 aa27.96■■■□□ 2.07
IRF3-227ENST00000600911 VPS37DQ86XT2 251 aa27.96■■■□□ 2.07
IRF3-227ENST00000600911 TDRD7Q8NHU6 1098 aaKnown RBP27.96■■■□□ 2.07
IRF3-227ENST00000600911 DBNDD1Q9H9R9 158 aa27.96■■■□□ 2.07
IRF3-227ENST00000600911 CYP2E1P05181 493 aaPredicted RBP27.95■■■□□ 2.06
IRF3-227ENST00000600911 UQCRFS1P1P0C7P4 283 aa27.95■■■□□ 2.06
IRF3-227ENST00000600911 KIAA2012Q0VF49 1180 aa27.95■■■□□ 2.06
IRF3-227ENST00000600911 SOGA3Q5TF21 947 aa27.95■■■□□ 2.06
IRF3-227ENST00000600911 ZC3H12CQ9C0D7 883 aaKnown RBP27.95■■■□□ 2.06
IRF3-227ENST00000600911 KCNQ5Q9NR82 932 aa27.95■■■□□ 2.06
IRF3-227ENST00000600911 SBF1O95248 1867 aa27.95■■■□□ 2.06
IRF3-227ENST00000600911 TRIM6-TRIM34B2RNG4 842 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms