RNA–Protein interactions for RNA: ENST00000597743.5

CALM3-209, Transcript of calmodulin 3, human

TSL 4 BASIC

Gene CALM3, Length 577 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALM3-209	ENST00000597743	RTL9	Q8NET4	1388 aa		32.64	■■■□□ 2.82
CALM3-209	ENST00000597743	CLUAP1	Q96AJ1	413 aa		32.64	■■■□□ 2.82
CALM3-209	ENST00000597743	THSD7B	Q9C0I4	1608 aa		32.64	■■■□□ 2.82
CALM3-209	ENST00000597743	UFL1	O94874	794 aa		32.63	■■■□□ 2.81
CALM3-209	ENST00000597743	SAMD7	Q7Z3H4	446 aa		32.63	■■■□□ 2.81
CALM3-209	ENST00000597743	GREM2	Q9H772	168 aa		32.63	■■■□□ 2.81
CALM3-209	ENST00000597743	GGA1	Q9UJY5	639 aa		32.63	■■■□□ 2.81
CALM3-209	ENST00000597743	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.62	■■■□□ 2.81
CALM3-209	ENST00000597743	EPHA10	Q5JZY3	1008 aa		32.62	■■■□□ 2.81
CALM3-209	ENST00000597743	USP48	Q86UV5	1035 aa		32.62	■■■□□ 2.81
CALM3-209	ENST00000597743	SUCLG2	Q96I99	432 aa		32.62	■■■□□ 2.81
CALM3-209	ENST00000597743	KAZALD1	Q96I82	304 aa		32.61	■■■□□ 2.81
CALM3-209	ENST00000597743	DCPS	Q96C86	337 aa	Known RBP	32.6	■■■□□ 2.81
CALM3-209	ENST00000597743	COL4A1	P02462	1669 aa		32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	AOC2	O75106	756 aa		32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	RBM26	Q5T8P6	1007 aa	Known RBP	32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	LMBR1L	Q6UX01	489 aa		32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	KRT26	Q7Z3Y9	468 aa		32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	ANKRD18A	Q8IVF6	992 aa		32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	CDC5L	Q99459	802 aa	Known RBP	32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	KCNQ5	Q9NR82	932 aa		32.59	■■■□□ 2.81
CALM3-209	ENST00000597743	CA12	O43570	354 aa		32.58	■■■□□ 2.81
CALM3-209	ENST00000597743	FAM161A	Q3B820	660 aa		32.58	■■■□□ 2.81
CALM3-209	ENST00000597743	FTSJ3	Q8IY81	847 aa	Known RBP	32.58	■■■□□ 2.81
CALM3-209	ENST00000597743	DZIP1L	Q8IYY4	767 aa	Known RBP	32.58	■■■□□ 2.81
CALM3-209	ENST00000597743	MYH3	P11055	1940 aa		32.57	■■■□□ 2.81
CALM3-209	ENST00000597743	VIL1	P09327	827 aa	Known RBP	32.57	■■■□□ 2.8
CALM3-209	ENST00000597743	TMEM57	Q8N5G2	664 aa		32.57	■■■□□ 2.8
CALM3-209	ENST00000597743	ITGA6	P23229	1130 aa		32.56	■■■□□ 2.8
CALM3-209	ENST00000597743	POLR2A	P24928	1970 aa	Known RBP	32.56	■■■□□ 2.8
CALM3-209	ENST00000597743	XDH	P47989	1333 aa		32.55	■■■□□ 2.8
CALM3-209	ENST00000597743	UBTFL1	P0CB47	393 aa	Predicted RBP	32.55	■■■□□ 2.8
CALM3-209	ENST00000597743	HUNK	P57058	714 aa		32.55	■■■□□ 2.8
CALM3-209	ENST00000597743	BICC1	Q9H694	974 aa	Known RBP	32.55	■■■□□ 2.8
CALM3-209	ENST00000597743	RLBP1	P12271	317 aa		32.54	■■■□□ 2.8
CALM3-209	ENST00000597743	KIF4B	Q2VIQ3	1234 aa		32.54	■■■□□ 2.8
CALM3-209	ENST00000597743	RABL6	Q3YEC7	729 aa	Predicted RBP	32.54	■■■□□ 2.8
CALM3-209	ENST00000597743	MEIS3	Q99687	375 aa		32.54	■■■□□ 2.8
CALM3-209	ENST00000597743	CHMP3	Q9Y3E7	222 aa		32.54	■■■□□ 2.8
CALM3-209	ENST00000597743	EGFR	P00533	1210 aa		32.53	■■■□□ 2.8
CALM3-209	ENST00000597743	NOG	Q13253	232 aa		32.53	■■■□□ 2.8
CALM3-209	ENST00000597743	IFIT5	Q13325	482 aa	Known RBP	32.53	■■■□□ 2.8
CALM3-209	ENST00000597743	C2orf69	Q8N8R5	385 aa		32.53	■■■□□ 2.8
CALM3-209	ENST00000597743	HDAC5	Q9UQL6	1122 aa		32.53	■■■□□ 2.8
CALM3-209	ENST00000597743	ANKRD18B	A2A2Z9	1011 aa		32.52	■■■□□ 2.8
CALM3-209	ENST00000597743	MS4A1	P11836	297 aa		32.52	■■■□□ 2.8
CALM3-209	ENST00000597743	ATP2B4	P23634	1241 aa		32.52	■■■□□ 2.8
CALM3-209	ENST00000597743	ANKRD44	Q8N8A2	993 aa		32.52	■■■□□ 2.8
CALM3-209	ENST00000597743	SCN9A	Q15858	1988 aa		32.51	■■■□□ 2.8
CALM3-209	ENST00000597743	GNAI3	P08754	354 aa		32.51	■■■□□ 2.79
CALM3-209	ENST00000597743	SULF1	Q8IWU6	871 aa		32.51	■■■□□ 2.79
CALM3-209	ENST00000597743	AGBL3	Q8NEM8	1001 aa		32.51	■■■□□ 2.79
CALM3-209	ENST00000597743	ABHD8	Q96I13	439 aa		32.51	■■■□□ 2.79
CALM3-209	ENST00000597743	BSDC1	Q9NW68	430 aa	Predicted RBP	32.51	■■■□□ 2.79
CALM3-209	ENST00000597743	IGHMBP2	P38935	993 aa	Known RBP	32.5	■■■□□ 2.79
CALM3-209	ENST00000597743	CCDC57	Q2TAC2	916 aa		32.5	■■■□□ 2.79
CALM3-209	ENST00000597743	GBA2	Q9HCG7	927 aa	Predicted RBP	32.5	■■■□□ 2.79
CALM3-209	ENST00000597743	PLIN1	O60240	522 aa		32.49	■■■□□ 2.79
CALM3-209	ENST00000597743	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.49	■■■□□ 2.79
CALM3-209	ENST00000597743	TSKS	Q9UJT2	592 aa		32.49	■■■□□ 2.79
CALM3-209	ENST00000597743	PODN	Q7Z5L7	613 aa		32.48	■■■□□ 2.79
CALM3-209	ENST00000597743	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.48	■■■□□ 2.79
CALM3-209	ENST00000597743	PANK1	Q8TE04	598 aa		32.48	■■■□□ 2.79
CALM3-209	ENST00000597743	ADM5	C9JUS6	153 aa		32.47	■■■□□ 2.79
CALM3-209	ENST00000597743	DLK2	Q6UY11	383 aa		32.47	■■■□□ 2.79
CALM3-209	ENST00000597743	ITPRIP	Q8IWB1	547 aa		32.47	■■■□□ 2.79
CALM3-209	ENST00000597743	GGA3	Q9NZ52	723 aa		32.47	■■■□□ 2.79
CALM3-209	ENST00000597743	LRRFIP2	Q9Y608	721 aa	Known RBP	32.47	■■■□□ 2.79
CALM3-209	ENST00000597743	ZNF280A	P59817	542 aa	Predicted RBP	32.46	■■■□□ 2.79
CALM3-209	ENST00000597743	RGMB	Q6NW40	437 aa		32.46	■■■□□ 2.79
CALM3-209	ENST00000597743	MPHOSPH8	Q99549	860 aa		32.46	■■■□□ 2.79
CALM3-209	ENST00000597743	USP17L3	A6NCW0	530 aa		32.45	■■■□□ 2.79
CALM3-209	ENST00000597743	USP17L4	A6NCW7	530 aa		32.45	■■■□□ 2.79
CALM3-209	ENST00000597743	USP17L1	Q7RTZ2	530 aa		32.45	■■■□□ 2.79
CALM3-209	ENST00000597743	CCDC102A	Q96A19	550 aa		32.45	■■■□□ 2.79
CALM3-209	ENST00000597743	ZNF609	O15014	1411 aa		32.44	■■■□□ 2.78
CALM3-209	ENST00000597743	USP17L8	P0C7I0	530 aa		32.44	■■■□□ 2.78
CALM3-209	ENST00000597743	TAF7L	Q5H9L4	462 aa		32.44	■■■□□ 2.78
CALM3-209	ENST00000597743	MINPP1	Q9UNW1	487 aa		32.44	■■■□□ 2.78
CALM3-209	ENST00000597743	ZNF157	P51786	506 aa	Predicted RBP	32.42	■■■□□ 2.78
CALM3-209	ENST00000597743	SCARF1	Q14162	830 aa		32.42	■■■□□ 2.78
CALM3-209	ENST00000597743	ZNF594	Q96JF6	807 aa	Predicted RBP	32.42	■■■□□ 2.78
CALM3-209	ENST00000597743	PSME4	Q14997	1843 aa		32.42	■■■□□ 2.78
CALM3-209	ENST00000597743	ZBTB7B	O15156	539 aa	Predicted RBP	32.41	■■■□□ 2.78
CALM3-209	ENST00000597743	GNAI2	P04899	355 aa		32.41	■■■□□ 2.78
CALM3-209	ENST00000597743	MED23	Q9ULK4	1368 aa		32.41	■■■□□ 2.78
CALM3-209	ENST00000597743	PDE3A	Q14432	1141 aa		32.4	■■■□□ 2.78
CALM3-209	ENST00000597743	GML	Q99445	158 aa		32.4	■■■□□ 2.78
CALM3-209	ENST00000597743	MYOZ2	Q9NPC6	264 aa		32.4	■■■□□ 2.78
CALM3-209	ENST00000597743	ANGEL2	Q5VTE6	544 aa	Known RBP	32.39	■■■□□ 2.78
CALM3-209	ENST00000597743	LDHAL6A	Q6ZMR3	332 aa		32.39	■■■□□ 2.78
CALM3-209	ENST00000597743	CDCA5	Q96FF9	252 aa		32.39	■■■□□ 2.78
CALM3-209	ENST00000597743	CASP8AP2	Q9UKL3	1982 aa		32.38	■■■□□ 2.77
CALM3-209	ENST00000597743	ASTN2	O75129	1339 aa	Predicted RBP	32.38	■■■□□ 2.77
CALM3-209	ENST00000597743	ZIC5	Q96T25	663 aa		32.38	■■■□□ 2.77
CALM3-209	ENST00000597743	FAM155A	B1AL88	458 aa	Predicted RBP	32.37	■■■□□ 2.77
CALM3-209	ENST00000597743	MVP	Q14764	893 aa	Known RBP	32.37	■■■□□ 2.77
CALM3-209	ENST00000597743	OGFOD1	Q8N543	542 aa		32.37	■■■□□ 2.77
CALM3-209	ENST00000597743	ANKRD2	Q9GZV1	360 aa		32.37	■■■□□ 2.77
CALM3-209	ENST00000597743	LEMD3	Q9Y2U8	911 aa		32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms