RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HSPA4P34932 840 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 TIMM10P62072 90 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 METTL24Q5JXM2 366 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
SMAD4-206ENST00000588860 FAM227BQ96M60 508 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 CNNM1Q9NRU3 951 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 AKAP2Q9Y2D5 859 aa10.58□□□□□ -0.72
SMAD4-206ENST00000588860 DOCK2Q92608 1830 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 NTSR2O95665 410 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 GORABQ5T7V8 394 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
SMAD4-206ENST00000588860 CHMP5Q9NZZ3 219 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 NDUFB9Q9Y6M9 179 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 CCDC171Q6TFL3 1326 aa10.57□□□□□ -0.72
SMAD4-206ENST00000588860 MED23Q9ULK4 1368 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 A0A0D9SFI3 127 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 GNPATO15228 680 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 IFIT1P09914 478 aaKnown RBP10.56□□□□□ -0.72
SMAD4-206ENST00000588860 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
SMAD4-206ENST00000588860 ADORA1P30542 326 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 NEK4P51957 841 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 PTH1RQ03431 593 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 ATP2B3Q16720 1220 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 TTC39AQ5SRH9 613 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 LDHAL6AQ6ZMR3 332 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 DDX46Q7L014 1031 aaKnown RBP10.56□□□□□ -0.72
SMAD4-206ENST00000588860 CDAN1Q8IWY9 1227 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 IL17RAQ96F46 866 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
SMAD4-206ENST00000588860 COL4A1P02462 1669 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 GOLIM4O00461 696 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 RPS6KA4O75676 772 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 CCDC152Q4G0S7 254 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 CCDC158Q5M9N0 1113 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 SMIM5Q71RC9 77 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMAD4-206ENST00000588860 FHDC1Q9C0D6 1143 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-206ENST00000588860 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 PAG1Q9NWQ8 432 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
SMAD4-206ENST00000588860 RTL9Q8NET4 1388 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 ABCC12Q96J65 1359 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 RGL2O15211 777 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 FRAT2O75474 233 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 DDIT3P35638 169 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 PTGER2P43116 358 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 KCNJ4P48050 445 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 USPL1Q5W0Q7 1092 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 PRPF40BQ6NWY9 871 aaKnown RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 BICDL1Q6ZP65 573 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 SRP68Q9UHB9 627 aaKnown RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 NARFQ9UHQ1 456 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 RBM8AQ9Y5S9 174 aaKnown RBP10.54□□□□□ -0.72
SMAD4-206ENST00000588860 MROH5Q6ZUA9 1318 aa10.54□□□□□ -0.72
SMAD4-206ENST00000588860 ZPR1O75312 459 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 ZBTB7AO95365 584 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 MCM2P49736 904 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 MPHOSPH8Q99549 860 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 UPF3BQ9BZI7 483 aaKnown RBP10.53□□□□□ -0.72
SMAD4-206ENST00000588860 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 SEC31BQ9NQW1 1179 aa10.53□□□□□ -0.72
SMAD4-206ENST00000588860 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
SMAD4-206ENST00000588860 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 IGHMBP2P38935 993 aaKnown RBP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 MCMDC2Q4G0Z9 681 aa10.52□□□□□ -0.73
SMAD4-206ENST00000588860 CREB3L3Q68CJ9 461 aa10.52□□□□□ -0.73
SMAD4-206ENST00000588860 CCDC129Q6ZRS4 1044 aa10.52□□□□□ -0.73
SMAD4-206ENST00000588860 NOL8Q76FK4 1167 aaKnown RBP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 ZNF589Q86UQ0 364 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 KCNB2Q92953 911 aa10.52□□□□□ -0.73
SMAD4-206ENST00000588860 PDGFDQ9GZP0 370 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-206ENST00000588860 RNF113AO15541 343 aaKnown RBP10.51□□□□□ -0.73
SMAD4-206ENST00000588860 PHF14O94880 888 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 PDE8BO95263 885 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 CHGBP05060 677 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 SLC5A1P13866 664 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-206ENST00000588860 HSPA6P17066 643 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 SCARF1Q14162 830 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 IL27Q8NEV9 243 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 HELBQ8NG08 1087 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-206ENST00000588860 MAP4K1Q92918 833 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 JAKMIP1Q96N16 626 aaKnown RBP10.51□□□□□ -0.73
SMAD4-206ENST00000588860 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms