RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
BRCA1-225ENST00000586385 KLRK1P26718 216 aa15.35■□□□□ 0.05
BRCA1-225ENST00000586385 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
BRCA1-225ENST00000586385 BSDC1Q9NW68 430 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-225ENST00000586385 WNT10BO00744 389 aa15.34■□□□□ 0.05
BRCA1-225ENST00000586385 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
BRCA1-225ENST00000586385 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
BRCA1-225ENST00000586385 KSR2Q6VAB6 950 aa15.34■□□□□ 0.05
BRCA1-225ENST00000586385 G2E3Q7L622 706 aa15.34■□□□□ 0.05
BRCA1-225ENST00000586385 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
BRCA1-225ENST00000586385 NEURL1BA8MQ27 555 aa15.33■□□□□ 0.04
BRCA1-225ENST00000586385 H7C1W4 665 aa15.33■□□□□ 0.04
BRCA1-225ENST00000586385 CCT4P50991 539 aaKnown RBP15.33■□□□□ 0.04
BRCA1-225ENST00000586385 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
BRCA1-225ENST00000586385 CDC5LQ99459 802 aaKnown RBP15.33■□□□□ 0.04
BRCA1-225ENST00000586385 DDX58O95786 925 aaKnown RBP15.32■□□□□ 0.04
BRCA1-225ENST00000586385 CASP7P55210 303 aa15.32■□□□□ 0.04
BRCA1-225ENST00000586385 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
BRCA1-225ENST00000586385 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-225ENST00000586385 ZBED3Q96IU2 234 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-225ENST00000586385 SASH1O94885 1247 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 UBE3BQ7Z3V4 1068 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 ZNF296Q8WUU4 475 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-225ENST00000586385 R3HDMLQ9H3Y0 253 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 IRS2Q9Y4H2 1338 aa15.31■□□□□ 0.04
BRCA1-225ENST00000586385 TM4SF4P48230 202 aa15.3■□□□□ 0.04
BRCA1-225ENST00000586385 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
BRCA1-225ENST00000586385 PDE4DIPQ5VU43 2346 aa15.3■□□□□ 0.04
BRCA1-225ENST00000586385 COA1Q9GZY4 146 aa15.3■□□□□ 0.04
BRCA1-225ENST00000586385 SNAP23O00161 211 aa15.29■□□□□ 0.04
BRCA1-225ENST00000586385 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
BRCA1-225ENST00000586385 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
BRCA1-225ENST00000586385 PLA2G12BQ9BX93 195 aa15.29■□□□□ 0.04
BRCA1-225ENST00000586385 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
BRCA1-225ENST00000586385 ZNF804BA4D1E1 1349 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 CSF1RP07333 972 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 ITGA6P23229 1130 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 GCKRQ14397 625 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 LDLRAD1Q5T700 205 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 CERS5Q8N5B7 392 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 FBXW7Q969H0 707 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 FZD1Q9UP38 647 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 LEMD3Q9Y2U8 911 aa15.28■□□□□ 0.04
BRCA1-225ENST00000586385 MYO3BQ8WXR4 1341 aa15.27■□□□□ 0.04
BRCA1-225ENST00000586385 GPR25O00155 361 aa15.27■□□□□ 0.04
BRCA1-225ENST00000586385 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
BRCA1-225ENST00000586385 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.04
BRCA1-225ENST00000586385 KIAA0825Q8IV33 1275 aa15.27■□□□□ 0.04
BRCA1-225ENST00000586385 OGFOD1Q8N543 542 aa15.27■□□□□ 0.04
BRCA1-225ENST00000586385 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.04
BRCA1-225ENST00000586385 SSC5DA1L4H1 1573 aa15.27■□□□□ 0.03
BRCA1-225ENST00000586385 SPEF2Q9C093 1822 aa15.27■□□□□ 0.03
BRCA1-225ENST00000586385 AOX1Q06278 1338 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 GTF2IP78347 998 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 NEXNQ0ZGT2 675 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 PRKG1Q13976 671 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 TTLL12Q14166 644 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-225ENST00000586385 TWISTNBQ3B726 338 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-225ENST00000586385 WWC1Q8IX03 1113 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 CFHR5Q9BXR6 569 aa15.26■□□□□ 0.03
BRCA1-225ENST00000586385 IGHMBP2P38935 993 aaKnown RBP15.25■□□□□ 0.03
BRCA1-225ENST00000586385 CHRNDQ07001 517 aa15.25■□□□□ 0.03
BRCA1-225ENST00000586385 FLIIQ13045 1269 aa15.25■□□□□ 0.03
BRCA1-225ENST00000586385 SPRYD7Q5W111 196 aa15.25■□□□□ 0.03
BRCA1-225ENST00000586385 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
BRCA1-225ENST00000586385 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
BRCA1-225ENST00000586385 PKN2Q16513 984 aaKnown RBP15.24■□□□□ 0.03
BRCA1-225ENST00000586385 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
BRCA1-225ENST00000586385 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
BRCA1-225ENST00000586385 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
BRCA1-225ENST00000586385 ANKRD2Q9GZV1 360 aa15.24■□□□□ 0.03
BRCA1-225ENST00000586385 MYH3P11055 1940 aa15.23■□□□□ 0.03
BRCA1-225ENST00000586385 NF2P35240 595 aa15.23■□□□□ 0.03
BRCA1-225ENST00000586385 MMP14P50281 582 aa15.23■□□□□ 0.03
BRCA1-225ENST00000586385 C15orf52Q6ZUT6 534 aaKnown RBP15.23■□□□□ 0.03
BRCA1-225ENST00000586385 HELBQ8NG08 1087 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-225ENST00000586385 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
BRCA1-225ENST00000586385 DEFB129Q9H1M3 183 aa15.23■□□□□ 0.03
BRCA1-225ENST00000586385 HDAC9Q9UKV0 1011 aa15.23■□□□□ 0.03
BRCA1-225ENST00000586385 TAF5LO75529 589 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 FOXO4P98177 505 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 PRPF38BQ5VTL8 546 aaKnown RBP15.22■□□□□ 0.03
BRCA1-225ENST00000586385 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-225ENST00000586385 ARMC9Q7Z3E5 817 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 MTMR14Q8NCE2 650 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
BRCA1-225ENST00000586385 ANGEL1Q9UNK9 670 aaKnown RBP15.22■□□□□ 0.03
BRCA1-225ENST00000586385 FKTNO75072 461 aa15.21■□□□□ 0.03
BRCA1-225ENST00000586385 SREBF2Q12772 1141 aa15.21■□□□□ 0.03
BRCA1-225ENST00000586385 EPHA10Q5JZY3 1008 aa15.21■□□□□ 0.03
BRCA1-225ENST00000586385 MPHOSPH8Q99549 860 aa15.21■□□□□ 0.03
BRCA1-225ENST00000586385 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-225ENST00000586385 IL16Q14005 1332 aa15.2■□□□□ 0.02
BRCA1-225ENST00000586385 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms