RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 USP17L17D6RBQ6 530 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 USP17L19D6RCP7 530 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 USP17L20D6RJB6 530 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 RAB11FIP3O75154 756 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 TAGLNQ01995 201 aaKnown RBP6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 USP17L24Q0WX57 530 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 MRPL58Q14197 206 aaKnown RBP6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 SWI5Q1ZZU3 235 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 IFFO2Q5TF58 517 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 EGFLAMQ63HQ2 1017 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 BICDL1Q6ZP65 573 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 C2CD5Q86YS7 1000 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 ZSCAN29Q8IWY8 852 aaPredicted RBP6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 TTC5Q8N0Z6 440 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 HELBQ8NG08 1087 aaPredicted RBP6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 FAM200AQ8TCP9 573 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 PTCD2Q8WV60 388 aaKnown RBP6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 BACH2Q9BYV9 841 aa6.34□□□□□ -1.39
GAPLINC-202ENST00000579007 SPEF2Q9C093 1822 aa6.34□□□□□ -1.4
GAPLINC-202ENST00000579007 RIC1Q4ADV7 1423 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 DUOX1Q9NRD9 1551 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 A1BGP04217 495 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 PPP2R1AP30153 589 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 IL6STP40189 918 aaPredicted RBP6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 APLP1P51693 650 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 TEFQ10587 303 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 SDE2Q6IQ49 451 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 USP17L2Q6R6M4 530 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 MCM10Q7L590 875 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 RNF135Q8IUD6 432 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 LARGE2Q8N3Y3 721 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 FMNL2Q96PY5 1086 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 SUGT1Q9Y2Z0 365 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 PSME4Q14997 1843 aa6.33□□□□□ -1.4
GAPLINC-202ENST00000579007 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 A0A1B0GUL6 1792 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 POTECB2RU33 542 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 NBPF26B4DH59 902 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 STARD3NLO95772 234 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 LMNB1P20700 586 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 TIE1P35590 1138 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 USP46P62068 366 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 IGBP1P78318 339 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 RAD51AP2Q09MP3 1159 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 EAPPQ56P03 285 aaPredicted RBP6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 NBPF10Q6P3W6 841 aaKnown RBP6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 NBPF15Q8N660 670 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 TTLL6Q8N841 843 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 DNAJC2Q99543 621 aaKnown RBP6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 BRINP2Q9C0B6 783 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 RRAGCQ9HB90 399 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 DCTN4Q9UJW0 460 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 PCDHGA10Q9Y5H3 936 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 USP16Q9Y5T5 823 aa6.32□□□□□ -1.4
GAPLINC-202ENST00000579007 LTBP3Q9NS15 1303 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 A0A087WZG4 1122 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 GLTPD2A6NH11 291 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 BTBD11A6QL63 1104 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 C21orf2O43822 256 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 ATP2B1P20020 1258 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 MAPK1P28482 360 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 FSTL1Q12841 308 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 PTK7Q13308 1070 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 PRPF40BQ6NWY9 871 aaKnown RBP6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 DZIP3Q86Y13 1208 aaKnown RBP6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 JMYQ8N9B5 988 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 CNBD1Q8NA66 436 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 LRRN4Q8WUT4 740 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 KLRG1Q96E93 195 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 TINF2Q9BSI4 451 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 BOLA1Q9Y3E2 137 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 MYH3P11055 1940 aa6.31□□□□□ -1.4
GAPLINC-202ENST00000579007 ZNF541Q9H0D2 1346 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 SCN9AQ15858 1988 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 USP17L5A8MUK1 530 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 H0YIN7 160 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 TPD52L2O43399 206 aaKnown RBP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 ICMTO60725 284 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 POTEIP0CG38 1075 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 POTEJP0CG39 1038 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 U2AF1L5P0DN76 240 aaPredicted RBP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 SRGNP10124 158 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 PRKAR2AP13861 404 aaKnown RBP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 FXR2P51116 673 aaKnown RBP eCLIP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 PTPROQ16827 1216 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 CCDC144BQ3MJ40 725 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 CRTC2Q53ET0 693 aaPredicted RBP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 GORABQ5T7V8 394 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 OLFM4Q6UX06 510 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 SLF2Q8IX21 1173 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 KCNB2Q92953 911 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 BRIP1Q9BX63 1249 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms