RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 ECM29Q5VYK3 1845 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 PI4KAP2A4QPH2 592 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 USP17L3A6NCW0 530 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 USP17L4A6NCW7 530 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 SNAP23O00161 211 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 DDX58O95786 925 aaKnown RBP4.95□□□□□ -1.62
NUP85-209ENST00000578987 IGKV5-2P06315 115 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
NUP85-209ENST00000578987 MKRN3Q13064 507 aaKnown RBP4.95□□□□□ -1.62
NUP85-209ENST00000578987 CWF19L2Q2TBE0 894 aaKnown RBP4.95□□□□□ -1.62
NUP85-209ENST00000578987 NBPF9Q3BBW0 867 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 ANGEL2Q5VTE6 544 aaKnown RBP4.95□□□□□ -1.62
NUP85-209ENST00000578987 CCDC30Q5VVM6 783 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 RSBN1LQ6PCB5 846 aaPredicted RBP4.95□□□□□ -1.62
NUP85-209ENST00000578987 USP17L1Q7RTZ2 530 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 TXNRD3Q86VQ6 643 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 SULF1Q8IWU6 871 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 PI4KAP1Q8N8J0 262 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 TTLL11Q8NHH1 800 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 CDCA5Q96FF9 252 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 HHIPL1Q96JK4 782 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 CSRNP1Q96S65 589 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 GREM2Q9H772 168 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 MYOZ2Q9NPC6 264 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 IFT57Q9NWB7 429 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 RNF186Q9NXI6 227 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 GGA3Q9NZ52 723 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 PODXL2Q9NZ53 605 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 MINPP1Q9UNW1 487 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 A0A1B0GUL6 1792 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 AK9Q5TCS8 1911 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 CDHR2Q9BYE9 1310 aa4.95□□□□□ -1.62
NUP85-209ENST00000578987 TBC1D8O95759 1140 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 USP17L8P0C7I0 530 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 ATP2B4P23634 1241 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 RPS12P25398 132 aaKnown RBP4.94□□□□□ -1.62
NUP85-209ENST00000578987 CCT4P50991 539 aaKnown RBP4.94□□□□□ -1.62
NUP85-209ENST00000578987 CTSWP56202 376 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 MLLT1Q03111 559 aaPredicted RBP4.94□□□□□ -1.62
NUP85-209ENST00000578987 NOGQ13253 232 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 TWISTNBQ3B726 338 aaPredicted RBP4.94□□□□□ -1.62
NUP85-209ENST00000578987 KSR2Q6VAB6 950 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 HELBQ8NG08 1087 aaPredicted RBP4.94□□□□□ -1.62
NUP85-209ENST00000578987 CCDC102AQ96A19 550 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 GMLQ99445 158 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 FZD1Q9UP38 647 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 PCDHAC2Q9Y5I4 1007 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 XDHP47989 1333 aa4.94□□□□□ -1.62
NUP85-209ENST00000578987 NEURL1BA8MQ27 555 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 F6X3S4 739 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 H7C1W4 665 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 CA12O43570 354 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 PLIN1O60240 522 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 TAF5LO75529 589 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 SLC10A3P09131 477 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 KLRK1P26718 216 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 RGS19P49795 217 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 SOX10P56693 466 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 ZNF280AP59817 542 aaPredicted RBP4.93□□□□□ -1.62
NUP85-209ENST00000578987 CALD1Q05682 793 aaKnown RBP4.93□□□□□ -1.62
NUP85-209ENST00000578987 NEXNQ0ZGT2 675 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 TTLL12Q14166 644 aaPredicted RBP4.93□□□□□ -1.62
NUP85-209ENST00000578987 TTLL5Q6EMB2 1281 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 UBE3BQ7Z3V4 1068 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 RASAL3Q86YV0 1011 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 KIAA0825Q8IV33 1275 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 WWC1Q8IX03 1113 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 AGBL3Q8NEM8 1001 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 CDC5LQ99459 802 aaKnown RBP4.93□□□□□ -1.62
NUP85-209ENST00000578987 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
NUP85-209ENST00000578987 BSDC1Q9NW68 430 aaPredicted RBP4.93□□□□□ -1.62
NUP85-209ENST00000578987 ZNF316A6NFI3 1004 aaPredicted RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 F8W031 263 aaPredicted RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 WNT10BO00744 389 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 VAMP4O75379 141 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 SASH1O94885 1247 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 HSP90B1P14625 803 aaKnown RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 ITGA6P23229 1130 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 IGHMBP2P38935 993 aaKnown RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 GTF2IP78347 998 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 PTPN12Q05209 780 aaKnown RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 EXOSC9Q06265 439 aaKnown RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 GCKRQ14397 625 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 DACT2Q5SW24 774 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 PODNQ7Z5L7 613 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 ZNF594Q96JF6 807 aaPredicted RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 R3HDMLQ9H3Y0 253 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 SPINK5Q9NQ38 1064 aaPredicted RBP4.92□□□□□ -1.62
NUP85-209ENST00000578987 JAG2Q9Y219 1238 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 CHMP3Q9Y3E7 222 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 ZNF804BA4D1E1 1349 aa4.92□□□□□ -1.62
NUP85-209ENST00000578987 PAPPA2Q9BXP8 1791 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 SPDYE4A6NLX3 237 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 CSF1RP07333 972 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 CASP7P55210 303 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 FOXO4P98177 505 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 CHRNDQ07001 517 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 FLIIQ13045 1269 aa4.91□□□□□ -1.62
NUP85-209ENST00000578987 FKBP5Q13451 457 aaPredicted RBP4.91□□□□□ -1.62
NUP85-209ENST00000578987 EPHA10Q5JZY3 1008 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 362.8 ms