RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 GPR25O00155 361 aa12.92□□□□□ -0.34
CALCOCO2-227ENST00000575560 WNT10BO00744 389 aa12.92□□□□□ -0.34
CALCOCO2-227ENST00000575560 DACT2Q5SW24 774 aa12.92□□□□□ -0.34
CALCOCO2-227ENST00000575560 CCDC85AQ96PX6 553 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO2-227ENST00000575560 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
CALCOCO2-227ENST00000575560 CWC25Q9NXE8 425 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO2-227ENST00000575560 CENPFP49454 3210 aa12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 PSME4Q14997 1843 aa12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
CALCOCO2-227ENST00000575560 MMP14P50281 582 aa12.9□□□□□ -0.34
CALCOCO2-227ENST00000575560 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
CALCOCO2-227ENST00000575560 TTLL11Q8NHH1 800 aa12.9□□□□□ -0.34
CALCOCO2-227ENST00000575560 R3HDMLQ9H3Y0 253 aa12.9□□□□□ -0.34
CALCOCO2-227ENST00000575560 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
CALCOCO2-227ENST00000575560 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 CTSWP56202 376 aa12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 LDLRAD1Q5T700 205 aa12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 CDC5LQ99459 802 aaKnown RBP12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 IFT57Q9NWB7 429 aa12.89□□□□□ -0.35
CALCOCO2-227ENST00000575560 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 FKTNO75072 461 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 NF2P35240 595 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 ZBED3Q96IU2 234 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
CALCOCO2-227ENST00000575560 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 GNAI1P63096 354 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 ARMC9Q7Z3E5 817 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 GREM2Q9H772 168 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 MAP3K2Q9Y2U5 619 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
CALCOCO2-227ENST00000575560 BRCA2P51587 3418 aa12.86□□□□□ -0.35
CALCOCO2-227ENST00000575560 SASH1O94885 1247 aa12.86□□□□□ -0.35
CALCOCO2-227ENST00000575560 INHBEP58166 350 aa12.86□□□□□ -0.35
CALCOCO2-227ENST00000575560 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
CALCOCO2-227ENST00000575560 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
CALCOCO2-227ENST00000575560 APOBEC3FQ8IUX4 373 aaKnown RBP12.86□□□□□ -0.35
CALCOCO2-227ENST00000575560 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 CALD1Q05682 793 aaKnown RBP12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 PRKG1Q13976 671 aa12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 FBXW7Q969H0 707 aa12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 CHMP4AQ9BY43 222 aa12.85□□□□□ -0.35
CALCOCO2-227ENST00000575560 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 H7C1W4 665 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 APAF1O14727 1248 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 KLRK1P26718 216 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 MAP3K11Q16584 847 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 KIAA0825Q8IV33 1275 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 ANGEL1Q9UNK9 670 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
CALCOCO2-227ENST00000575560 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 NEURL1BA8MQ27 555 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 GTF2IP78347 998 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 CWF19L2Q2TBE0 894 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 INTS3Q68E01 1043 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 MTMR14Q8NCE2 650 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 ANKRD2Q9GZV1 360 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 DEFB129Q9H1M3 183 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
CALCOCO2-227ENST00000575560 UNCXA6NJT0 531 aa12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 CSF1RP07333 972 aa12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 ZBTB48P10074 688 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 PLA2G12BQ9BX93 195 aa12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
CALCOCO2-227ENST00000575560 COL1A1P02452 1464 aaPredicted RBP12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 ITGA6P23229 1130 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 NEXNQ0ZGT2 675 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 DLGAP5Q15398 846 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 UBE3BQ7Z3V4 1068 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 CERS5Q8N5B7 392 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 CD209Q9NNX6 404 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
CALCOCO2-227ENST00000575560 IRS2Q9Y4H2 1338 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms