RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
RPA1-206ENST00000573994 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
RPA1-206ENST00000573994 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
RPA1-206ENST00000573994 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 XDHP47989 1333 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 CCER2I3L3R5 266 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 PSMD14O00487 310 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 TNIP1Q15025 636 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 SLC4A10Q6U841 1118 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 KCNQ5Q9NR82 932 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
RPA1-206ENST00000573994 WTIPA6NIX2 430 aaPredicted RBP12.68□□□□□ -0.38
RPA1-206ENST00000573994 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
RPA1-206ENST00000573994 ITGA6P23229 1130 aa12.68□□□□□ -0.38
RPA1-206ENST00000573994 SLFN5Q08AF3 891 aa12.68□□□□□ -0.38
RPA1-206ENST00000573994 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
RPA1-206ENST00000573994 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
RPA1-206ENST00000573994 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
RPA1-206ENST00000573994 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
RPA1-206ENST00000573994 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
RPA1-206ENST00000573994 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
RPA1-206ENST00000573994 G3V3G9 751 aa12.67□□□□□ -0.38
RPA1-206ENST00000573994 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
RPA1-206ENST00000573994 FMR1Q06787 632 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPA1-206ENST00000573994 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
RPA1-206ENST00000573994 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
RPA1-206ENST00000573994 MRPL50Q8N5N7 158 aaKnown RBP12.67□□□□□ -0.38
RPA1-206ENST00000573994 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
RPA1-206ENST00000573994 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
RPA1-206ENST00000573994 GRM8O00222 908 aa12.66□□□□□ -0.38
RPA1-206ENST00000573994 TRAF5O00463 557 aa12.66□□□□□ -0.38
RPA1-206ENST00000573994 ATP2B4P23634 1241 aa12.66□□□□□ -0.38
RPA1-206ENST00000573994 EPHA10Q5JZY3 1008 aa12.66□□□□□ -0.38
RPA1-206ENST00000573994 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
RPA1-206ENST00000573994 SPEF2Q9C093 1822 aa12.66□□□□□ -0.38
RPA1-206ENST00000573994 TMEM88BA6NKF7 163 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 CSF1RP07333 972 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 KLRK1P26718 216 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
RPA1-206ENST00000573994 FOXO4P98177 505 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 SRCIN1Q9C0H9 1055 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 C9orf78Q9NZ63 289 aaPredicted RBP12.65□□□□□ -0.38
RPA1-206ENST00000573994 CNOT7Q9UIV1 285 aaKnown RBP12.65□□□□□ -0.38
RPA1-206ENST00000573994 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
RPA1-206ENST00000573994 ANKRD18BA2A2Z9 1011 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 H7C1D1 291 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 ALDH1L1O75891 902 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 EGFRP00533 1210 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
RPA1-206ENST00000573994 TBC1D10BQ4KMP7 808 aaPredicted RBP12.64□□□□□ -0.39
RPA1-206ENST00000573994 LMBR1LQ6UX01 489 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
RPA1-206ENST00000573994 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 MYH3P11055 1940 aa12.64□□□□□ -0.39
RPA1-206ENST00000573994 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
RPA1-206ENST00000573994 RBM26Q5T8P6 1007 aaKnown RBP12.63□□□□□ -0.39
RPA1-206ENST00000573994 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
RPA1-206ENST00000573994 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
RPA1-206ENST00000573994 ZNF594Q96JF6 807 aaPredicted RBP12.63□□□□□ -0.39
RPA1-206ENST00000573994 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
RPA1-206ENST00000573994 PTPRCP08575 1304 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 SCN9AQ15858 1988 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 SNAP23O00161 211 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
RPA1-206ENST00000573994 RPS12P25398 132 aaKnown RBP12.62□□□□□ -0.39
RPA1-206ENST00000573994 KCNJ4P48050 445 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 CHRNDQ07001 517 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 TAF7LQ5H9L4 462 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 TXNRD3Q86VQ6 643 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
RPA1-206ENST00000573994 DPF2Q92785 391 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 MXD3Q9BW11 206 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
RPA1-206ENST00000573994 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 TAF5LO75529 589 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 HSPA1AP0DMV8 641 aaKnown RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 HSPA1BP0DMV9 641 aaKnown RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 KIF4BQ2VIQ3 1234 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 DIEXFQ68CQ4 756 aaKnown RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 ZNF408Q9H9D4 720 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
RPA1-206ENST00000573994 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
RPA1-206ENST00000573994 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
RPA1-206ENST00000573994 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
RPA1-206ENST00000573994 VEGFBP49765 207 aa12.6□□□□□ -0.39
RPA1-206ENST00000573994 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
RPA1-206ENST00000573994 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
RPA1-206ENST00000573994 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms