RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 SMC4Q9NTJ3 1288 aa38.32■■■■□ 3.72
CTDNEP1-206ENST00000571409 PCNTO95613 3336 aa38.31■■■■□ 3.72
CTDNEP1-206ENST00000571409 KLRK1P26718 216 aa38.31■■■■□ 3.72
CTDNEP1-206ENST00000571409 TAF7LQ5H9L4 462 aa38.31■■■■□ 3.72
CTDNEP1-206ENST00000571409 ZNF594Q96JF6 807 aaPredicted RBP38.31■■■■□ 3.72
CTDNEP1-206ENST00000571409 UTYO14607 1347 aa38.31■■■■□ 3.72
CTDNEP1-206ENST00000571409 HELBQ8NG08 1087 aaPredicted RBP38.3■■■■□ 3.72
CTDNEP1-206ENST00000571409 TAF5LO75529 589 aa38.29■■■■□ 3.72
CTDNEP1-206ENST00000571409 CELF2O95319 508 aaKnown RBP38.29■■■■□ 3.72
CTDNEP1-206ENST00000571409 KAZALD1Q96I82 304 aa38.29■■■■□ 3.72
CTDNEP1-206ENST00000571409 GMLQ99445 158 aa38.29■■■■□ 3.72
CTDNEP1-206ENST00000571409 CT47B1P0C2W7 299 aaPredicted RBP38.28■■■■□ 3.72
CTDNEP1-206ENST00000571409 FBXW7Q969H0 707 aa38.28■■■■□ 3.72
CTDNEP1-206ENST00000571409 ZNF646O15015 1829 aaPredicted RBP38.28■■■■□ 3.72
CTDNEP1-206ENST00000571409 ZNF280AP59817 542 aaPredicted RBP38.27■■■■□ 3.72
CTDNEP1-206ENST00000571409 LDHAL6AQ6ZMR3 332 aa38.27■■■■□ 3.72
CTDNEP1-206ENST00000571409 USP48Q86UV5 1035 aa38.27■■■■□ 3.72
CTDNEP1-206ENST00000571409 SNAP23O00161 211 aa38.26■■■■□ 3.72
CTDNEP1-206ENST00000571409 DIEXFQ68CQ4 756 aaKnown RBP38.26■■■■□ 3.72
CTDNEP1-206ENST00000571409 USP17L8P0C7I0 530 aa38.25■■■■□ 3.71
CTDNEP1-206ENST00000571409 DACT2Q5SW24 774 aa38.25■■■■□ 3.71
CTDNEP1-206ENST00000571409 DCPSQ96C86 337 aaKnown RBP38.25■■■■□ 3.71
CTDNEP1-206ENST00000571409 ZNF408Q9H9D4 720 aa38.25■■■■□ 3.71
CTDNEP1-206ENST00000571409 CNNM1Q9NRU3 951 aa38.25■■■■□ 3.71
CTDNEP1-206ENST00000571409 TLL2Q9Y6L7 1015 aa38.25■■■■□ 3.71
CTDNEP1-206ENST00000571409 MIER1Q8N108 512 aa38.24■■■■□ 3.71
CTDNEP1-206ENST00000571409 BICC1Q9H694 974 aaKnown RBP38.24■■■■□ 3.71
CTDNEP1-206ENST00000571409 STRIP1Q5VSL9 837 aa38.23■■■■□ 3.71
CTDNEP1-206ENST00000571409 KRT26Q7Z3Y9 468 aa38.23■■■■□ 3.71
CTDNEP1-206ENST00000571409 MXD3Q9BW11 206 aa38.23■■■■□ 3.71
CTDNEP1-206ENST00000571409 POLR2AP24928 1970 aaKnown RBP38.22■■■■□ 3.71
CTDNEP1-206ENST00000571409 WDR33Q9C0J8 1336 aaKnown RBP38.22■■■■□ 3.71
CTDNEP1-206ENST00000571409 IRS2Q9Y4H2 1338 aa38.22■■■■□ 3.71
CTDNEP1-206ENST00000571409 GGA3Q9NZ52 723 aa38.22■■■■□ 3.71
CTDNEP1-206ENST00000571409 PLIN1O60240 522 aa38.21■■■■□ 3.71
CTDNEP1-206ENST00000571409 DLK2Q6UY11 383 aa38.21■■■■□ 3.71
CTDNEP1-206ENST00000571409 PAXIP1Q6ZW49 1069 aaPredicted RBP38.21■■■■□ 3.71
CTDNEP1-206ENST00000571409 MYOZ2Q9NPC6 264 aa38.21■■■■□ 3.71
CTDNEP1-206ENST00000571409 MYO3BQ8WXR4 1341 aa38.2■■■■□ 3.71
CTDNEP1-206ENST00000571409 RABL6Q3YEC7 729 aaPredicted RBP38.2■■■■□ 3.71
CTDNEP1-206ENST00000571409 C15orf52Q6ZUT6 534 aaKnown RBP38.2■■■■□ 3.71
CTDNEP1-206ENST00000571409 USP44Q9H0E7 712 aa38.2■■■■□ 3.71
CTDNEP1-206ENST00000571409 ASTN2O75129 1339 aaPredicted RBP38.19■■■■□ 3.7
CTDNEP1-206ENST00000571409 ADM5C9JUS6 153 aa38.19■■■■□ 3.7
CTDNEP1-206ENST00000571409 TTLL5Q6EMB2 1281 aa38.19■■■■□ 3.7
CTDNEP1-206ENST00000571409 CD209Q9NNX6 404 aa38.19■■■■□ 3.7
CTDNEP1-206ENST00000571409 SCARF1Q14162 830 aa38.18■■■■□ 3.7
CTDNEP1-206ENST00000571409 SAPCD2Q86UD0 394 aa38.18■■■■□ 3.7
CTDNEP1-206ENST00000571409 ANKRD44Q8N8A2 993 aa38.18■■■■□ 3.7
CTDNEP1-206ENST00000571409 NOB1Q9ULX3 412 aaKnown RBP38.18■■■■□ 3.7
CTDNEP1-206ENST00000571409 GTF2IP78347 998 aa38.17■■■■□ 3.7
CTDNEP1-206ENST00000571409 CYP4F22Q6NT55 531 aa38.17■■■■□ 3.7
CTDNEP1-206ENST00000571409 CAPNS2Q96L46 248 aa38.17■■■■□ 3.7
CTDNEP1-206ENST00000571409 PUS3Q9BZE2 481 aaKnown RBP38.17■■■■□ 3.7
CTDNEP1-206ENST00000571409 ECE1P42892 770 aa38.16■■■■□ 3.7
CTDNEP1-206ENST00000571409 BRPF1P55201 1214 aaPredicted RBP38.15■■■■□ 3.7
CTDNEP1-206ENST00000571409 GRM1Q13255 1194 aa38.15■■■■□ 3.7
CTDNEP1-206ENST00000571409 ANGEL2Q5VTE6 544 aaKnown RBP38.15■■■■□ 3.7
CTDNEP1-206ENST00000571409 ZNF804AQ7Z570 1209 aa38.15■■■■□ 3.7
CTDNEP1-206ENST00000571409 SULF1Q8IWU6 871 aa38.15■■■■□ 3.7
CTDNEP1-206ENST00000571409 OGFOD1Q8N543 542 aa38.15■■■■□ 3.7
CTDNEP1-206ENST00000571409 COL13A1Q5TAT6 717 aaPredicted RBP38.14■■■■□ 3.7
CTDNEP1-206ENST00000571409 RARSP54136 660 aaKnown RBP38.13■■■■□ 3.69
CTDNEP1-206ENST00000571409 IFFO2Q5TF58 517 aa38.12■■■■□ 3.69
CTDNEP1-206ENST00000571409 THSD7BQ9C0I4 1608 aa38.12■■■■□ 3.69
CTDNEP1-206ENST00000571409 API5Q9BZZ5 524 aaKnown RBP38.11■■■■□ 3.69
CTDNEP1-206ENST00000571409 RIPOR2Q9Y4F9 1068 aa38.11■■■■□ 3.69
CTDNEP1-206ENST00000571409 FOXN1O15353 648 aa38.1■■■■□ 3.69
CTDNEP1-206ENST00000571409 IL1R1P14778 569 aa38.1■■■■□ 3.69
CTDNEP1-206ENST00000571409 KIAA0825Q8IV33 1275 aa38.1■■■■□ 3.69
CTDNEP1-206ENST00000571409 AIDAQ96BJ3 306 aa38.1■■■■□ 3.69
CTDNEP1-206ENST00000571409 HHIPL1Q96JK4 782 aa38.1■■■■□ 3.69
CTDNEP1-206ENST00000571409 WBP1LQ9NX94 342 aa38.1■■■■□ 3.69
CTDNEP1-206ENST00000571409 UBE4AQ14139 1066 aa38.09■■■■□ 3.69
CTDNEP1-206ENST00000571409 MROH5Q6ZUA9 1318 aa38.09■■■■□ 3.69
CTDNEP1-206ENST00000571409 NBPF9Q3BBW0 867 aa38.08■■■■□ 3.69
CTDNEP1-206ENST00000571409 GBA2Q9HCG7 927 aaPredicted RBP38.08■■■■□ 3.69
CTDNEP1-206ENST00000571409 PITPNM2Q9BZ72 1349 aa38.08■■■■□ 3.69
CTDNEP1-206ENST00000571409 MMP14P50281 582 aa38.07■■■■□ 3.68
CTDNEP1-206ENST00000571409 LRRC24Q50LG9 513 aa38.07■■■■□ 3.68
CTDNEP1-206ENST00000571409 HDAC9Q9UKV0 1011 aa38.07■■■■□ 3.68
CTDNEP1-206ENST00000571409 MAP2K1Q02750 393 aaPredicted RBP38.06■■■■□ 3.68
CTDNEP1-206ENST00000571409 KIF16BQ96L93 1317 aa38.06■■■■□ 3.68
CTDNEP1-206ENST00000571409 WNT10BO00744 389 aa38.05■■■■□ 3.68
CTDNEP1-206ENST00000571409 HUNKP57058 714 aa38.05■■■■□ 3.68
CTDNEP1-206ENST00000571409 HNRNPUQ00839 825 aaKnown RBP eCLIP38.05■■■■□ 3.68
CTDNEP1-206ENST00000571409 C2orf69Q8N8R5 385 aa38.05■■■■□ 3.68
CTDNEP1-206ENST00000571409 KLHDC4Q8TBB5 520 aa38.05■■■■□ 3.68
CTDNEP1-206ENST00000571409 CDCA5Q96FF9 252 aa38.05■■■■□ 3.68
CTDNEP1-206ENST00000571409 CERS5Q8N5B7 392 aa38.04■■■■□ 3.68
CTDNEP1-206ENST00000571409 AOC2O75106 756 aa38.03■■■■□ 3.68
CTDNEP1-206ENST00000571409 UBTFL1P0CB47 393 aaPredicted RBP38.03■■■■□ 3.68
CTDNEP1-206ENST00000571409 METTL24Q5JXM2 366 aa38.03■■■■□ 3.68
CTDNEP1-206ENST00000571409 SCAF8Q9UPN6 1271 aaKnown RBP38.03■■■■□ 3.68
CTDNEP1-206ENST00000571409 SASH1O94885 1247 aa38.02■■■■□ 3.68
CTDNEP1-206ENST00000571409 GYG1P46976 350 aa38.02■■■■□ 3.68
CTDNEP1-206ENST00000571409 JAG2Q9Y219 1238 aa38.02■■■■□ 3.68
CTDNEP1-206ENST00000571409 HIBADHP31937 336 aaKnown RBP38■■■■□ 3.67
CTDNEP1-206ENST00000571409 MAP2K2P36507 400 aa38■■■■□ 3.67
CTDNEP1-206ENST00000571409 CTCFP49711 727 aaPredicted RBP38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms