RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
COMMD4-214ENST00000566230 CTSWP56202 376 aa17.27■□□□□ 0.36
COMMD4-214ENST00000566230 GNAI1P63096 354 aa17.27■□□□□ 0.36
COMMD4-214ENST00000566230 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
COMMD4-214ENST00000566230 MINPP1Q9UNW1 487 aa17.27■□□□□ 0.36
COMMD4-214ENST00000566230 MED23Q9ULK4 1368 aa17.27■□□□□ 0.35
COMMD4-214ENST00000566230 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
COMMD4-214ENST00000566230 TM4SF4P48230 202 aa17.26■□□□□ 0.35
COMMD4-214ENST00000566230 BSDC1Q9NW68 430 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-214ENST00000566230 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
COMMD4-214ENST00000566230 WNT10BO00744 389 aa17.25■□□□□ 0.35
COMMD4-214ENST00000566230 APAF1O14727 1248 aa17.25■□□□□ 0.35
COMMD4-214ENST00000566230 ANP32CO43423 234 aa17.25■□□□□ 0.35
COMMD4-214ENST00000566230 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
COMMD4-214ENST00000566230 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
COMMD4-214ENST00000566230 GREM2Q9H772 168 aa17.25■□□□□ 0.35
COMMD4-214ENST00000566230 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
COMMD4-214ENST00000566230 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-214ENST00000566230 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
COMMD4-214ENST00000566230 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
COMMD4-214ENST00000566230 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
COMMD4-214ENST00000566230 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 GPR25O00155 361 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 SASH1O94885 1247 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 DDX58O95786 925 aaKnown RBP17.23■□□□□ 0.35
COMMD4-214ENST00000566230 PTPN12Q05209 780 aaKnown RBP17.23■□□□□ 0.35
COMMD4-214ENST00000566230 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
COMMD4-214ENST00000566230 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 PRPF38BQ5VTL8 546 aaKnown RBP17.23■□□□□ 0.35
COMMD4-214ENST00000566230 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 R3HDMLQ9H3Y0 253 aa17.23■□□□□ 0.35
COMMD4-214ENST00000566230 NOM1Q5C9Z4 860 aaKnown RBP17.22■□□□□ 0.35
COMMD4-214ENST00000566230 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
COMMD4-214ENST00000566230 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
COMMD4-214ENST00000566230 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
COMMD4-214ENST00000566230 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.35
COMMD4-214ENST00000566230 KLRK1P26718 216 aa17.21■□□□□ 0.35
COMMD4-214ENST00000566230 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.35
COMMD4-214ENST00000566230 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
COMMD4-214ENST00000566230 ZBED3Q96IU2 234 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-214ENST00000566230 H7C1W4 665 aa17.2■□□□□ 0.34
COMMD4-214ENST00000566230 NF2P35240 595 aa17.2■□□□□ 0.34
COMMD4-214ENST00000566230 PRKG1Q13976 671 aa17.2■□□□□ 0.34
COMMD4-214ENST00000566230 LDLRAD1Q5T700 205 aa17.2■□□□□ 0.34
COMMD4-214ENST00000566230 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-214ENST00000566230 CFHR5Q9BXR6 569 aa17.2■□□□□ 0.34
COMMD4-214ENST00000566230 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
COMMD4-214ENST00000566230 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
COMMD4-214ENST00000566230 MMP14P50281 582 aa17.19■□□□□ 0.34
COMMD4-214ENST00000566230 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
COMMD4-214ENST00000566230 G2E3Q7L622 706 aa17.19■□□□□ 0.34
COMMD4-214ENST00000566230 KIAA0825Q8IV33 1275 aa17.19■□□□□ 0.34
COMMD4-214ENST00000566230 FZD1Q9UP38 647 aa17.19■□□□□ 0.34
COMMD4-214ENST00000566230 FKTNO75072 461 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 SREBF2Q12772 1141 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 SPRYD7Q5W111 196 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 ARMC9Q7Z3E5 817 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 UBE3BQ7Z3V4 1068 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 CHMP4AQ9BY43 222 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 ZNF804BA4D1E1 1349 aa17.18■□□□□ 0.34
COMMD4-214ENST00000566230 GTF2IP78347 998 aa17.17■□□□□ 0.34
COMMD4-214ENST00000566230 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
COMMD4-214ENST00000566230 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
COMMD4-214ENST00000566230 ANGEL1Q9UNK9 670 aaKnown RBP17.17■□□□□ 0.34
COMMD4-214ENST00000566230 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
COMMD4-214ENST00000566230 LAMB1P07942 1786 aa17.16■□□□□ 0.34
COMMD4-214ENST00000566230 ITGA6P23229 1130 aa17.16■□□□□ 0.34
COMMD4-214ENST00000566230 IGHMBP2P38935 993 aaKnown RBP17.16■□□□□ 0.34
COMMD4-214ENST00000566230 CASP7P55210 303 aa17.16■□□□□ 0.34
COMMD4-214ENST00000566230 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
COMMD4-214ENST00000566230 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
COMMD4-214ENST00000566230 ANKRD2Q9GZV1 360 aa17.16■□□□□ 0.34
COMMD4-214ENST00000566230 HTTP42858 3142 aa17.16■□□□□ 0.34
COMMD4-214ENST00000566230 KIAA0100Q14667 2235 aaKnown RBP17.15■□□□□ 0.34
COMMD4-214ENST00000566230 CSF1RP07333 972 aa17.15■□□□□ 0.34
COMMD4-214ENST00000566230 CERS5Q8N5B7 392 aa17.15■□□□□ 0.34
COMMD4-214ENST00000566230 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
COMMD4-214ENST00000566230 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
COMMD4-214ENST00000566230 SNAP23O00161 211 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 CHRNDQ07001 517 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 GCKRQ14397 625 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 SLC10A4Q96EP9 437 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 DEFB129Q9H1M3 183 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 PCDHAC2Q9Y5I4 1007 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 SSC5DA1L4H1 1573 aa17.14■□□□□ 0.33
COMMD4-214ENST00000566230 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
COMMD4-214ENST00000566230 MAP3K11Q16584 847 aa17.13■□□□□ 0.33
COMMD4-214ENST00000566230 IFNL1Q8IU54 200 aa17.13■□□□□ 0.33
COMMD4-214ENST00000566230 CLMNQ96JQ2 1002 aa17.13■□□□□ 0.33
COMMD4-214ENST00000566230 MPHOSPH8Q99549 860 aa17.13■□□□□ 0.33
COMMD4-214ENST00000566230 CACNA1FO60840 1977 aa17.13■□□□□ 0.33
COMMD4-214ENST00000566230 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-214ENST00000566230 MANSC4A6NHS7 340 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-214ENST00000566230 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
COMMD4-214ENST00000566230 DLGAP5Q15398 846 aa17.12■□□□□ 0.33
COMMD4-214ENST00000566230 MTMR14Q8NCE2 650 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms