RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TRPM4Q8TD43 1214 aa21.04■□□□□ 0.96
USB1-211ENST00000565662 GPR101Q96P66 508 aaPredicted RBP21.04■□□□□ 0.96
USB1-211ENST00000565662 RABL6Q3YEC7 729 aaPredicted RBP21.03■□□□□ 0.96
USB1-211ENST00000565662 MKRN1Q9UHC7 482 aaKnown RBP21.03■□□□□ 0.96
USB1-211ENST00000565662 HDAC9Q9UKV0 1011 aa21.03■□□□□ 0.96
USB1-211ENST00000565662 MROH5Q6ZUA9 1318 aa21.03■□□□□ 0.96
USB1-211ENST00000565662 SULF1Q8IWU6 871 aa21.02■□□□□ 0.96
USB1-211ENST00000565662 ARHGAP45Q92619 1136 aa21.02■□□□□ 0.96
USB1-211ENST00000565662 TLL2Q9Y6L7 1015 aa21.02■□□□□ 0.96
USB1-211ENST00000565662 THSD7BQ9C0I4 1608 aa21.02■□□□□ 0.96
USB1-211ENST00000565662 UBE4AQ14139 1066 aa21.01■□□□□ 0.95
USB1-211ENST00000565662 AIDAQ96BJ3 306 aa21.01■□□□□ 0.95
USB1-211ENST00000565662 CDCA7LQ96GN5 454 aa21.01■□□□□ 0.95
USB1-211ENST00000565662 IPO8O15397 1037 aaKnown RBP21■□□□□ 0.95
USB1-211ENST00000565662 CELF2O95319 508 aaKnown RBP21■□□□□ 0.95
USB1-211ENST00000565662 HIRAP54198 1017 aaPredicted RBP21■□□□□ 0.95
USB1-211ENST00000565662 FKBP1AP62942 108 aaKnown RBP21■□□□□ 0.95
USB1-211ENST00000565662 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
USB1-211ENST00000565662 TBC1D10BQ4KMP7 808 aaPredicted RBP21■□□□□ 0.95
USB1-211ENST00000565662 SAMD7Q7Z3H4 446 aa21■□□□□ 0.95
USB1-211ENST00000565662 KRT26Q7Z3Y9 468 aa21■□□□□ 0.95
USB1-211ENST00000565662 SUCLG2Q96I99 432 aa21■□□□□ 0.95
USB1-211ENST00000565662 GMLQ99445 158 aa21■□□□□ 0.95
USB1-211ENST00000565662 MYOZ2Q9NPC6 264 aa21■□□□□ 0.95
USB1-211ENST00000565662 ZNF646O15015 1829 aaPredicted RBP20.99■□□□□ 0.95
USB1-211ENST00000565662 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
USB1-211ENST00000565662 DACT2Q5SW24 774 aa20.99■□□□□ 0.95
USB1-211ENST00000565662 TTLL5Q6EMB2 1281 aa20.99■□□□□ 0.95
USB1-211ENST00000565662 FBXO3Q9UK99 471 aa20.99■□□□□ 0.95
USB1-211ENST00000565662 HSPA1AP0DMV8 641 aaKnown RBP20.98■□□□□ 0.95
USB1-211ENST00000565662 HSPA1BP0DMV9 641 aaKnown RBP20.98■□□□□ 0.95
USB1-211ENST00000565662 GLIS2Q9BZE0 524 aaPredicted RBP20.98■□□□□ 0.95
USB1-211ENST00000565662 BICC1Q9H694 974 aaKnown RBP20.98■□□□□ 0.95
USB1-211ENST00000565662 KCNQ5Q9NR82 932 aa20.98■□□□□ 0.95
USB1-211ENST00000565662 IL1R1P14778 569 aa20.97■□□□□ 0.95
USB1-211ENST00000565662 VEGFBP49765 207 aa20.97■□□□□ 0.95
USB1-211ENST00000565662 EPHA10Q5JZY3 1008 aa20.97■□□□□ 0.95
USB1-211ENST00000565662 CD209Q9NNX6 404 aa20.97■□□□□ 0.95
USB1-211ENST00000565662 GGA3Q9NZ52 723 aa20.97■□□□□ 0.95
USB1-211ENST00000565662 WDR33Q9C0J8 1336 aaKnown RBP20.97■□□□□ 0.95
USB1-211ENST00000565662 COL1A1P02452 1464 aaPredicted RBP20.96■□□□□ 0.95
USB1-211ENST00000565662 UBTFL1P0CB47 393 aaPredicted RBP20.96■□□□□ 0.95
USB1-211ENST00000565662 FKBP1BP68106 108 aa20.96■□□□□ 0.95
USB1-211ENST00000565662 SAPCD2Q86UD0 394 aa20.96■□□□□ 0.95
USB1-211ENST00000565662 FBXW7Q969H0 707 aa20.96■□□□□ 0.95
USB1-211ENST00000565662 USP44Q9H0E7 712 aa20.96■□□□□ 0.95
USB1-211ENST00000565662 TRAF5O00463 557 aa20.95■□□□□ 0.94
USB1-211ENST00000565662 MAP2K2P36507 400 aa20.95■□□□□ 0.94
USB1-211ENST00000565662 RARSP54136 660 aaKnown RBP20.95■□□□□ 0.94
USB1-211ENST00000565662 RBM26Q5T8P6 1007 aaKnown RBP20.95■□□□□ 0.94
USB1-211ENST00000565662 CST9Q5W186 159 aa20.95■□□□□ 0.94
USB1-211ENST00000565662 PAXIP1Q6ZW49 1069 aaPredicted RBP20.95■□□□□ 0.94
USB1-211ENST00000565662 C2orf69Q8N8R5 385 aa20.95■□□□□ 0.94
USB1-211ENST00000565662 BEGAINQ9BUH8 593 aa20.95■□□□□ 0.94
USB1-211ENST00000565662 ARAP2Q8WZ64 1704 aa20.95■□□□□ 0.94
USB1-211ENST00000565662 KAZALD1Q96I82 304 aa20.94■□□□□ 0.94
USB1-211ENST00000565662 CAPNS2Q96L46 248 aa20.94■□□□□ 0.94
USB1-211ENST00000565662 IRS2Q9Y4H2 1338 aa20.94■□□□□ 0.94
USB1-211ENST00000565662 ECM29Q5VYK3 1845 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 SHTN1A0MZ66 631 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 CA12O43570 354 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 TAF5LO75529 589 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 GNAI3P08754 354 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 GTF2IP78347 998 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 SCARF1Q14162 830 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 CAVIN4Q5BKX8 364 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 USP48Q86UV5 1035 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 TXNRD3Q86VQ6 643 aa20.93■□□□□ 0.94
USB1-211ENST00000565662 APOBEC3FQ8IUX4 373 aaKnown RBP20.93■□□□□ 0.94
USB1-211ENST00000565662 NOB1Q9ULX3 412 aaKnown RBP20.93■□□□□ 0.94
USB1-211ENST00000565662 PAPPA2Q9BXP8 1791 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 POLR2AP24928 1970 aaKnown RBP20.92■□□□□ 0.94
USB1-211ENST00000565662 MYO1BO43795 1136 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 NF2P35240 595 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 HNRNPUQ00839 825 aaKnown RBP eCLIP20.92■□□□□ 0.94
USB1-211ENST00000565662 METTL24Q5JXM2 366 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 VPS37DQ86XT2 251 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 ZNF594Q96JF6 807 aaPredicted RBP20.92■□□□□ 0.94
USB1-211ENST00000565662 ZNF408Q9H9D4 720 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 GBA2Q9HCG7 927 aaPredicted RBP20.92■□□□□ 0.94
USB1-211ENST00000565662 RIPOR2Q9Y4F9 1068 aa20.92■□□□□ 0.94
USB1-211ENST00000565662 SASH1O94885 1247 aa20.91■□□□□ 0.94
USB1-211ENST00000565662 HIBADHP31937 336 aaKnown RBP20.91■□□□□ 0.94
USB1-211ENST00000565662 CTCFP49711 727 aaPredicted RBP20.91■□□□□ 0.94
USB1-211ENST00000565662 NOGQ13253 232 aa20.91■□□□□ 0.94
USB1-211ENST00000565662 ANGEL2Q5VTE6 544 aaKnown RBP20.91■□□□□ 0.94
USB1-211ENST00000565662 MTMR14Q8NCE2 650 aa20.91■□□□□ 0.94
USB1-211ENST00000565662 HELBQ8NG08 1087 aaPredicted RBP20.91■□□□□ 0.94
USB1-211ENST00000565662 ZBED9Q6R2W3 1325 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 FAM205AQ6ZU69 1335 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 PLIN1O60240 522 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 PDE8BO95263 885 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 EGFRP00533 1210 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 IFIT1P09914 478 aaKnown RBP20.9■□□□□ 0.94
USB1-211ENST00000565662 TBC1D22AQ8WUA7 517 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 CCDC102AQ96A19 550 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 PRDM10Q9NQV6 1147 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 WBP1LQ9NX94 342 aa20.9■□□□□ 0.94
USB1-211ENST00000565662 PPP2R3BQ9Y5P8 575 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms