RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 USP17L1Q7RTZ2 530 aa15.42■□□□□ 0.06
SPG7-211ENST00000565370 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
SPG7-211ENST00000565370 ZC3H15Q8WU90 426 aaKnown RBP15.42■□□□□ 0.06
SPG7-211ENST00000565370 ARHGAP45Q92619 1136 aa15.42■□□□□ 0.06
SPG7-211ENST00000565370 FBXW7Q969H0 707 aa15.42■□□□□ 0.06
SPG7-211ENST00000565370 ITGBL1O95965 494 aaPredicted RBP15.41■□□□□ 0.06
SPG7-211ENST00000565370 TRPM4Q8TD43 1214 aa15.41■□□□□ 0.06
SPG7-211ENST00000565370 ZNF646O15015 1829 aaPredicted RBP15.4■□□□□ 0.06
SPG7-211ENST00000565370 KIF4BQ2VIQ3 1234 aa15.4■□□□□ 0.06
SPG7-211ENST00000565370 TBC1D10BQ4KMP7 808 aaPredicted RBP15.4■□□□□ 0.06
SPG7-211ENST00000565370 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
SPG7-211ENST00000565370 KAZALD1Q96I82 304 aa15.4■□□□□ 0.06
SPG7-211ENST00000565370 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
SPG7-211ENST00000565370 USP44Q9H0E7 712 aa15.4■□□□□ 0.06
SPG7-211ENST00000565370 KCNQ5Q9NR82 932 aa15.4■□□□□ 0.06
SPG7-211ENST00000565370 MROH5Q6ZUA9 1318 aa15.4■□□□□ 0.06
SPG7-211ENST00000565370 PLIN1O60240 522 aa15.39■□□□□ 0.05
SPG7-211ENST00000565370 TAF5LO75529 589 aa15.39■□□□□ 0.05
SPG7-211ENST00000565370 KLRK1P26718 216 aa15.39■□□□□ 0.05
SPG7-211ENST00000565370 STRIP1Q5VSL9 837 aa15.39■□□□□ 0.05
SPG7-211ENST00000565370 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
SPG7-211ENST00000565370 HELBQ8NG08 1087 aaPredicted RBP15.39■□□□□ 0.05
SPG7-211ENST00000565370 FRAT1Q92837 279 aaPredicted RBP15.39■□□□□ 0.05
SPG7-211ENST00000565370 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
SPG7-211ENST00000565370 USP17L8P0C7I0 530 aa15.38■□□□□ 0.05
SPG7-211ENST00000565370 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
SPG7-211ENST00000565370 OGFOD1Q8N543 542 aa15.38■□□□□ 0.05
SPG7-211ENST00000565370 ABT1Q9ULW3 272 aaKnown RBP15.38■□□□□ 0.05
SPG7-211ENST00000565370 CNTNAP1P78357 1384 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
SPG7-211ENST00000565370 GNAI3P08754 354 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 MMP14P50281 582 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 ZNF280AP59817 542 aaPredicted RBP15.37■□□□□ 0.05
SPG7-211ENST00000565370 UBE4AQ14139 1066 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 ATF7IPQ6VMQ6 1270 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 CDC37L1Q7L3B6 337 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 TXNRD3Q86VQ6 643 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
SPG7-211ENST00000565370 MKRN1Q9UHC7 482 aaKnown RBP15.37■□□□□ 0.05
SPG7-211ENST00000565370 PGAP2Q9UHJ9 254 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 HDAC9Q9UKV0 1011 aa15.37■□□□□ 0.05
SPG7-211ENST00000565370 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
SPG7-211ENST00000565370 DACT2Q5SW24 774 aa15.36■□□□□ 0.05
SPG7-211ENST00000565370 RBM26Q5T8P6 1007 aaKnown RBP15.36■□□□□ 0.05
SPG7-211ENST00000565370 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
SPG7-211ENST00000565370 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
SPG7-211ENST00000565370 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
SPG7-211ENST00000565370 CD209Q9NNX6 404 aa15.36■□□□□ 0.05
SPG7-211ENST00000565370 MYOZ2Q9NPC6 264 aa15.36■□□□□ 0.05
SPG7-211ENST00000565370 GGA3Q9NZ52 723 aa15.36■□□□□ 0.05
SPG7-211ENST00000565370 TRAF5O00463 557 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 TRIM27P14373 513 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 GTF2IP78347 998 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 KRT26Q7Z3Y9 468 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 SULF1Q8IWU6 871 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 FTSJ3Q8IY81 847 aaKnown RBP15.35■□□□□ 0.05
SPG7-211ENST00000565370 GMLQ99445 158 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 GLIS2Q9BZE0 524 aaPredicted RBP15.35■□□□□ 0.05
SPG7-211ENST00000565370 PUS3Q9BZE2 481 aaKnown RBP15.35■□□□□ 0.05
SPG7-211ENST00000565370 IRS2Q9Y4H2 1338 aa15.35■□□□□ 0.05
SPG7-211ENST00000565370 SNAP23O00161 211 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 BCAR3O75815 825 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
SPG7-211ENST00000565370 VPS37DQ86XT2 251 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 MEIS3Q99687 375 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 ZNF408Q9H9D4 720 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 LRRFIP2Q9Y608 721 aaKnown RBP15.34■□□□□ 0.05
SPG7-211ENST00000565370 PITPNM2Q9BZ72 1349 aa15.34■□□□□ 0.05
SPG7-211ENST00000565370 RASSF10A6NK89 507 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 FOXN1O15353 648 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 EGFRP00533 1210 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 IL1R1P14778 569 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.04
SPG7-211ENST00000565370 LRRC24Q50LG9 513 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
SPG7-211ENST00000565370 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
SPG7-211ENST00000565370 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 EYA2O00167 538 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 PDE8BO95263 885 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
SPG7-211ENST00000565370 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
SPG7-211ENST00000565370 FKBP1AP62942 108 aaKnown RBP15.32■□□□□ 0.04
SPG7-211ENST00000565370 KIAA0825Q8IV33 1275 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 CLUAP1Q96AJ1 413 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 MYH13Q9UKX3 1938 aa15.32■□□□□ 0.04
SPG7-211ENST00000565370 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
SPG7-211ENST00000565370 CIAO1O76071 339 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 SLC5A1P13866 664 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 ECE1P42892 770 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 SCARF1Q14162 830 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 DEFB115Q30KQ5 88 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
SPG7-211ENST00000565370 USP48Q86UV5 1035 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
SPG7-211ENST00000565370 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms