RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 DNAJC25Q9H1X3 360 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 ATP11AP98196 1134 aa7.69□□□□□ -1.18
CHD9-210ENST00000564582 TRIM28Q13263 835 aaKnown RBP7.69□□□□□ -1.18
CHD9-210ENST00000564582 TMEM151AQ8N4L1 468 aa7.69□□□□□ -1.18
CHD9-210ENST00000564582 MUC3BQ9H195 1237 aa7.69□□□□□ -1.18
CHD9-210ENST00000564582 RASSF4Q9H2L5 321 aa7.69□□□□□ -1.18
CHD9-210ENST00000564582 GDF11O95390 407 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 SPATA31C1P0DKV0 1188 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 PTPRAP18433 802 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 COL9A3Q14050 684 aaPredicted RBP7.68□□□□□ -1.18
CHD9-210ENST00000564582 GRIK5Q16478 980 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 DTWD1Q8N5C7 304 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 DCAF11Q8TEB1 546 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 ASB16Q96NS5 453 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 SUV39H2Q9H5I1 410 aa7.68□□□□□ -1.18
CHD9-210ENST00000564582 PLCB3Q01970 1234 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 ORC1Q13415 861 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 GALNT12Q8IXK2 581 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 DMRTC2Q8IXT2 367 aaPredicted RBP7.67□□□□□ -1.18
CHD9-210ENST00000564582 IL22RA1Q8N6P7 574 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 CSRNP1Q96S65 589 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 OSMRQ99650 979 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 SRA1Q9HD15 236 aaKnown RBP7.67□□□□□ -1.18
CHD9-210ENST00000564582 DZANK1Q9NVP4 752 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 TRIM33Q9UPN9 1127 aa7.67□□□□□ -1.18
CHD9-210ENST00000564582 PDE2AO00408 941 aaPredicted RBP7.66□□□□□ -1.18
CHD9-210ENST00000564582 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
CHD9-210ENST00000564582 TREHO43280 583 aa7.66□□□□□ -1.18
CHD9-210ENST00000564582 IGHA2P01877 340 aa7.66□□□□□ -1.18
CHD9-210ENST00000564582 CDC27P30260 824 aa7.66□□□□□ -1.18
CHD9-210ENST00000564582 CABP4P57796 275 aa7.66□□□□□ -1.18
CHD9-210ENST00000564582 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
CHD9-210ENST00000564582 TMEM102Q8N9M5 508 aaPredicted RBP7.66□□□□□ -1.18
CHD9-210ENST00000564582 GZF1Q9H116 711 aaPredicted RBP7.66□□□□□ -1.18
CHD9-210ENST00000564582 PPME1Q9Y570 386 aa7.66□□□□□ -1.18
CHD9-210ENST00000564582 A0A0A0MRY4 1105 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 APBA3O96018 575 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 POLR3DP05423 398 aaPredicted RBP7.65□□□□□ -1.18
CHD9-210ENST00000564582 COL8A1P27658 744 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 FAM117BQ6P1L5 589 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 DCAF5Q96JK2 942 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 NACC1Q96RE7 527 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 ZKSCAN3Q9BRR0 538 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 LACRTQ9GZZ8 138 aa7.65□□□□□ -1.18
CHD9-210ENST00000564582 DSC3Q14574 896 aa7.64□□□□□ -1.19
CHD9-210ENST00000564582 POP1Q99575 1024 aaKnown RBP7.64□□□□□ -1.19
CHD9-210ENST00000564582 CDK11AQ9UQ88 783 aaPredicted RBP7.64□□□□□ -1.19
CHD9-210ENST00000564582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.64□□□□□ -1.19
CHD9-210ENST00000564582 CCER2I3L3R5 266 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 NFKBIEO00221 500 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 ACPPP15309 386 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 ELNP15502 786 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 GSK3AP49840 483 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 ATP2B2Q01814 1243 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 CCDC27Q2M243 656 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 PEAR1Q5VY43 1037 aaPredicted RBP7.63□□□□□ -1.19
CHD9-210ENST00000564582 USPL1Q5W0Q7 1092 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 FMR1NBQ8N0W7 255 aaPredicted RBP7.63□□□□□ -1.19
CHD9-210ENST00000564582 CCDC74AQ96AQ1 378 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 NPHS2Q9NP85 383 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
CHD9-210ENST00000564582 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 MAPK8P45983 427 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 BAG6P46379 1132 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 FGD1P98174 961 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 BSNDQ8WZ55 320 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 NXPE3Q969Y0 559 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 BHLHE41Q9C0J9 482 aaPredicted RBP7.62□□□□□ -1.19
CHD9-210ENST00000564582 EHD4Q9H223 541 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 LATS2Q9NRM7 1088 aa7.62□□□□□ -1.19
CHD9-210ENST00000564582 CEP162Q5TB80 1403 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 PNMA6FA0A0J9YX94 578 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 A0A1W2PP55 124 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 GADD45BO75293 160 aaPredicted RBP7.61□□□□□ -1.19
CHD9-210ENST00000564582 FMR1Q06787 632 aaKnown RBP eCLIP7.61□□□□□ -1.19
CHD9-210ENST00000564582 ENOX2Q16206 610 aaKnown RBP7.61□□□□□ -1.19
CHD9-210ENST00000564582 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 LIN7BQ9HAP6 207 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 PPP4R2Q9NY27 417 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 TRAK1Q9UPV9 953 aa7.61□□□□□ -1.19
CHD9-210ENST00000564582 H3BRJ5 948 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 TRPA1O75762 1119 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 ERCC3P19447 782 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 COL19A1Q14993 1142 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 ALG1LQ6GMV1 187 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 ILDR2Q71H61 639 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 FBF1Q8TES7 1133 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 HHIPQ96QV1 700 aa7.6□□□□□ -1.19
CHD9-210ENST00000564582 SH2B1Q9NRF2 756 aaPredicted RBP7.6□□□□□ -1.19
CHD9-210ENST00000564582 KRBA1A5PL33 1030 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 ANKRD33BA6NCL7 494 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 C9orf172C9J069 976 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 LINC01387J3KSC0 135 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
CHD9-210ENST00000564582 EPHA1P21709 976 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 ARL4DP49703 201 aa7.59□□□□□ -1.19
CHD9-210ENST00000564582 NRG1Q02297 640 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms