RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 VAMP4O75379 141 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 FAM9BQ8IZU0 186 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 OGFOD1Q8N543 542 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 LINS1Q8NG48 757 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 CCDC102AQ96A19 550 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 ANKRD2Q9GZV1 360 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 MYOZ2Q9NPC6 264 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 LEMD3Q9Y2U8 911 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 CHMP3Q9Y3E7 222 aa20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 ASTN2O75129 1339 aaPredicted RBP20.92■□□□□ 0.94
AC004449.1-201ENST00000564240 ZNF280AP59817 542 aaPredicted RBP20.91■□□□□ 0.94
AC004449.1-201ENST00000564240 SCN9AQ15858 1988 aa20.91■□□□□ 0.94
AC004449.1-201ENST00000564240 CDCA5Q96FF9 252 aa20.91■□□□□ 0.94
AC004449.1-201ENST00000564240 ANKRD18BA2A2Z9 1011 aa20.9■□□□□ 0.94
AC004449.1-201ENST00000564240 CCDC85CA6NKD9 419 aa20.9■□□□□ 0.94
AC004449.1-201ENST00000564240 ZIC5Q96T25 663 aa20.9■□□□□ 0.94
AC004449.1-201ENST00000564240 COA1Q9GZY4 146 aa20.9■□□□□ 0.94
AC004449.1-201ENST00000564240 MED23Q9ULK4 1368 aa20.89■□□□□ 0.93
AC004449.1-201ENST00000564240 ZNF804BA4D1E1 1349 aa20.89■□□□□ 0.93
AC004449.1-201ENST00000564240 FAM161AQ3B820 660 aa20.89■□□□□ 0.93
AC004449.1-201ENST00000564240 MXD3Q9BW11 206 aa20.89■□□□□ 0.93
AC004449.1-201ENST00000564240 PLA2G12BQ9BX93 195 aa20.89■□□□□ 0.93
AC004449.1-201ENST00000564240 KIF23Q02241 960 aaPredicted RBP20.88■□□□□ 0.93
AC004449.1-201ENST00000564240 TTLL5Q6EMB2 1281 aa20.88■□□□□ 0.93
AC004449.1-201ENST00000564240 GMLQ99445 158 aa20.88■□□□□ 0.93
AC004449.1-201ENST00000564240 SCAF8Q9UPN6 1271 aaKnown RBP20.88■□□□□ 0.93
AC004449.1-201ENST00000564240 MYH3P11055 1940 aa20.88■□□□□ 0.93
AC004449.1-201ENST00000564240 F6X3S4 739 aa20.87■□□□□ 0.93
AC004449.1-201ENST00000564240 TTLL12Q14166 644 aaPredicted RBP20.87■□□□□ 0.93
AC004449.1-201ENST00000564240 STRIP1Q5VSL9 837 aa20.87■□□□□ 0.93
AC004449.1-201ENST00000564240 CSF1RP07333 972 aa20.86■□□□□ 0.93
AC004449.1-201ENST00000564240 IFIT5Q13325 482 aaKnown RBP20.86■□□□□ 0.93
AC004449.1-201ENST00000564240 TAF7LQ5H9L4 462 aa20.86■□□□□ 0.93
AC004449.1-201ENST00000564240 DACT2Q5SW24 774 aa20.86■□□□□ 0.93
AC004449.1-201ENST00000564240 TXNRD3Q86VQ6 643 aa20.86■□□□□ 0.93
AC004449.1-201ENST00000564240 HDAC9Q9UKV0 1011 aa20.86■□□□□ 0.93
AC004449.1-201ENST00000564240 SPEF2Q9C093 1822 aa20.85■□□□□ 0.93
AC004449.1-201ENST00000564240 MYO3BQ8WXR4 1341 aa20.85■□□□□ 0.93
AC004449.1-201ENST00000564240 CASP8AP2Q9UKL3 1982 aa20.85■□□□□ 0.93
AC004449.1-201ENST00000564240 GTF2IP78347 998 aa20.85■□□□□ 0.93
AC004449.1-201ENST00000564240 CHRNDQ07001 517 aa20.85■□□□□ 0.93
AC004449.1-201ENST00000564240 NBPF9Q3BBW0 867 aa20.85■□□□□ 0.93
AC004449.1-201ENST00000564240 FAM155AB1AL88 458 aaPredicted RBP20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 PLIN1O60240 522 aa20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 NF2P35240 595 aa20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 CASP7P55210 303 aa20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 SLC4A10Q6U841 1118 aa20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 HELBQ8NG08 1087 aaPredicted RBP20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 C9orf78Q9NZ63 289 aaPredicted RBP20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 THSD7BQ9C0I4 1608 aa20.84■□□□□ 0.93
AC004449.1-201ENST00000564240 PITPNM2Q9BZ72 1349 aa20.83■□□□□ 0.93
AC004449.1-201ENST00000564240 TAF5LO75529 589 aa20.83■□□□□ 0.93
AC004449.1-201ENST00000564240 TRPA1O75762 1119 aa20.83■□□□□ 0.93
AC004449.1-201ENST00000564240 DGKZQ13574 1117 aa20.83■□□□□ 0.93
AC004449.1-201ENST00000564240 KIAA0825Q8IV33 1275 aa20.83■□□□□ 0.93
AC004449.1-201ENST00000564240 CACNA1FO60840 1977 aa20.83■□□□□ 0.92
AC004449.1-201ENST00000564240 UBE2Q2LH0YL09 131 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 KLRK1P26718 216 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 FKBP1BP68106 108 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 CCDC57Q2TAC2 916 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 BEND3Q5T5X7 828 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 MCOLN1Q9GZU1 580 aa20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 SPINK5Q9NQ38 1064 aaPredicted RBP20.82■□□□□ 0.92
AC004449.1-201ENST00000564240 WNT10BO00744 389 aa20.81■□□□□ 0.92
AC004449.1-201ENST00000564240 SASH1O94885 1247 aa20.81■□□□□ 0.92
AC004449.1-201ENST00000564240 SLC10A3P09131 477 aa20.81■□□□□ 0.92
AC004449.1-201ENST00000564240 CD209Q9NNX6 404 aa20.81■□□□□ 0.92
AC004449.1-201ENST00000564240 ZNF609O15014 1411 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 MMP14P50281 582 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 FOXO4P98177 505 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 MOB2Q70IA6 237 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 CSRNP1Q96S65 589 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 CNNM1Q9NRU3 951 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 RNF186Q9NXI6 227 aa20.8■□□□□ 0.92
AC004449.1-201ENST00000564240 SNAP23O00161 211 aa20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 PRKG1Q13976 671 aa20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 LDHAL6AQ6ZMR3 332 aa20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 ZNF804AQ7Z570 1209 aa20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 SAGE1Q9NXZ1 904 aa20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.79■□□□□ 0.92
AC004449.1-201ENST00000564240 PSME4Q14997 1843 aa20.78■□□□□ 0.92
AC004449.1-201ENST00000564240 GRM8O00222 908 aa20.78■□□□□ 0.92
AC004449.1-201ENST00000564240 DLGAP5Q15398 846 aa20.78■□□□□ 0.92
AC004449.1-201ENST00000564240 RASAL3Q86YV0 1011 aa20.78■□□□□ 0.92
AC004449.1-201ENST00000564240 ZNF594Q96JF6 807 aaPredicted RBP20.78■□□□□ 0.92
AC004449.1-201ENST00000564240 SRCIN1Q9C0H9 1055 aa20.78■□□□□ 0.92
AC004449.1-201ENST00000564240 F8W031 263 aaPredicted RBP20.77■□□□□ 0.92
AC004449.1-201ENST00000564240 ALDH1L1O75891 902 aa20.76■□□□□ 0.91
AC004449.1-201ENST00000564240 ARMC9Q7Z3E5 817 aa20.76■□□□□ 0.91
AC004449.1-201ENST00000564240 APOBEC3FQ8IUX4 373 aaKnown RBP20.76■□□□□ 0.91
AC004449.1-201ENST00000564240 AKAP11Q9UKA4 1901 aa20.75■□□□□ 0.91
AC004449.1-201ENST00000564240 RBM5P52756 815 aaKnown RBP eCLIP20.75■□□□□ 0.91
AC004449.1-201ENST00000564240 EPHA10Q5JZY3 1008 aa20.75■□□□□ 0.91
AC004449.1-201ENST00000564240 MYO1BO43795 1136 aa20.74■□□□□ 0.91
AC004449.1-201ENST00000564240 MKRN3Q13064 507 aaKnown RBP20.74■□□□□ 0.91
AC004449.1-201ENST00000564240 JAG2Q9Y219 1238 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms