RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CSF1RP07333 972 aa19.84■□□□□ 0.77
USB1-208ENST00000563207 CTCFP49711 727 aaPredicted RBP19.84■□□□□ 0.77
USB1-208ENST00000563207 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
USB1-208ENST00000563207 BRPF1P55201 1214 aaPredicted RBP19.84■□□□□ 0.77
USB1-208ENST00000563207 RSBN1LQ6PCB5 846 aaPredicted RBP19.84■□□□□ 0.77
USB1-208ENST00000563207 KRT26Q7Z3Y9 468 aa19.84■□□□□ 0.77
USB1-208ENST00000563207 SSH1Q8WYL5 1049 aa19.84■□□□□ 0.77
USB1-208ENST00000563207 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
USB1-208ENST00000563207 PLA2G12BQ9BX93 195 aa19.84■□□□□ 0.77
USB1-208ENST00000563207 TSKSQ9UJT2 592 aa19.84■□□□□ 0.77
USB1-208ENST00000563207 FOXO4P98177 505 aa19.83■□□□□ 0.77
USB1-208ENST00000563207 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.77
USB1-208ENST00000563207 BEND3Q5T5X7 828 aa19.83■□□□□ 0.77
USB1-208ENST00000563207 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.77
USB1-208ENST00000563207 RARSP54136 660 aaKnown RBP19.82■□□□□ 0.76
USB1-208ENST00000563207 ZNF280AP59817 542 aaPredicted RBP19.82■□□□□ 0.76
USB1-208ENST00000563207 GGA3Q9NZ52 723 aa19.82■□□□□ 0.76
USB1-208ENST00000563207 PTPRCP08575 1304 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 A0A1B0GUL6 1792 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 ECE1P42892 770 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 SCARF1Q14162 830 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 DCPSQ96C86 337 aaKnown RBP19.81■□□□□ 0.76
USB1-208ENST00000563207 PRDM10Q9NQV6 1147 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 SMC4Q9NTJ3 1288 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
USB1-208ENST00000563207 USP17L3A6NCW0 530 aa19.8■□□□□ 0.76
USB1-208ENST00000563207 USP17L4A6NCW7 530 aa19.8■□□□□ 0.76
USB1-208ENST00000563207 IGHMBP2P38935 993 aaKnown RBP19.8■□□□□ 0.76
USB1-208ENST00000563207 MAP2K1Q02750 393 aaPredicted RBP19.8■□□□□ 0.76
USB1-208ENST00000563207 ANGEL2Q5VTE6 544 aaKnown RBP19.8■□□□□ 0.76
USB1-208ENST00000563207 USP17L1Q7RTZ2 530 aa19.8■□□□□ 0.76
USB1-208ENST00000563207 HELBQ8NG08 1087 aaPredicted RBP19.8■□□□□ 0.76
USB1-208ENST00000563207 TAF5LO75529 589 aa19.79■□□□□ 0.76
USB1-208ENST00000563207 HUNKP57058 714 aa19.79■□□□□ 0.76
USB1-208ENST00000563207 DACT2Q5SW24 774 aa19.79■□□□□ 0.76
USB1-208ENST00000563207 PODNQ7Z5L7 613 aa19.79■□□□□ 0.76
USB1-208ENST00000563207 AGBL3Q8NEM8 1001 aa19.79■□□□□ 0.76
USB1-208ENST00000563207 FBXW7Q969H0 707 aa19.79■□□□□ 0.76
USB1-208ENST00000563207 ZNF594Q96JF6 807 aaPredicted RBP19.79■□□□□ 0.76
USB1-208ENST00000563207 USP17L8P0C7I0 530 aa19.78■□□□□ 0.76
USB1-208ENST00000563207 CHRNDQ07001 517 aa19.78■□□□□ 0.76
USB1-208ENST00000563207 MPHOSPH8Q99549 860 aa19.78■□□□□ 0.76
USB1-208ENST00000563207 MYOZ2Q9NPC6 264 aa19.78■□□□□ 0.76
USB1-208ENST00000563207 ZNF804BA4D1E1 1349 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 KIF16BQ96L93 1317 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 ZNF609O15014 1411 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 NBPF9Q3BBW0 867 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 PRAMEF18Q5VWM3 479 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 CHMP3Q9Y3E7 222 aa19.77■□□□□ 0.76
USB1-208ENST00000563207 IRS2Q9Y4H2 1338 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 ANKRD18BA2A2Z9 1011 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 LMBR1LQ6UX01 489 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 ARHGAP45Q92619 1136 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 CDCA5Q96FF9 252 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 HHIPL1Q96JK4 782 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 GBA2Q9HCG7 927 aaPredicted RBP19.76■□□□□ 0.75
USB1-208ENST00000563207 LEMD3Q9Y2U8 911 aa19.76■□□□□ 0.75
USB1-208ENST00000563207 FAM155AB1AL88 458 aaPredicted RBP19.75■□□□□ 0.75
USB1-208ENST00000563207 IPO8O15397 1037 aaKnown RBP19.75■□□□□ 0.75
USB1-208ENST00000563207 MAP2K2P36507 400 aa19.75■□□□□ 0.75
USB1-208ENST00000563207 MOB2Q70IA6 237 aa19.75■□□□□ 0.75
USB1-208ENST00000563207 SULF1Q8IWU6 871 aa19.75■□□□□ 0.75
USB1-208ENST00000563207 KAZALD1Q96I82 304 aa19.75■□□□□ 0.75
USB1-208ENST00000563207 COA1Q9GZY4 146 aa19.75■□□□□ 0.75
USB1-208ENST00000563207 GRM8O00222 908 aa19.74■□□□□ 0.75
USB1-208ENST00000563207 ANKRD2Q9GZV1 360 aa19.74■□□□□ 0.75
USB1-208ENST00000563207 SASH1O94885 1247 aa19.73■□□□□ 0.75
USB1-208ENST00000563207 GTF2IP78347 998 aa19.73■□□□□ 0.75
USB1-208ENST00000563207 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
USB1-208ENST00000563207 API5Q9BZZ5 524 aaKnown RBP19.73■□□□□ 0.75
USB1-208ENST00000563207 NOB1Q9ULX3 412 aaKnown RBP19.73■□□□□ 0.75
USB1-208ENST00000563207 NBPF7P0C2Y1 421 aaPredicted RBP19.72■□□□□ 0.75
USB1-208ENST00000563207 STRIP1Q5VSL9 837 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 TTLL5Q6EMB2 1281 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 KIAA0825Q8IV33 1275 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 C2orf69Q8N8R5 385 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 SUCLG2Q96I99 432 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 CD209Q9NNX6 404 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 PCDHAC2Q9Y5I4 1007 aa19.72■□□□□ 0.75
USB1-208ENST00000563207 PLIN1O60240 522 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 BCAR3O75815 825 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 KCNJ4P48050 445 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 CERS5Q8N5B7 392 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 PUS3Q9BZE2 481 aaKnown RBP19.71■□□□□ 0.75
USB1-208ENST00000563207 C9orf78Q9NZ63 289 aaPredicted RBP19.71■□□□□ 0.75
USB1-208ENST00000563207 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 JAG2Q9Y219 1238 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 CASP8AP2Q9UKL3 1982 aa19.71■□□□□ 0.75
USB1-208ENST00000563207 WNT10BO00744 389 aa19.7■□□□□ 0.74
USB1-208ENST00000563207 ZNF157P51786 506 aaPredicted RBP19.7■□□□□ 0.74
USB1-208ENST00000563207 SRCIN1Q9C0H9 1055 aa19.7■□□□□ 0.74
USB1-208ENST00000563207 ALDH1L1O75891 902 aa19.69■□□□□ 0.74
USB1-208ENST00000563207 KIF23Q02241 960 aaPredicted RBP19.69■□□□□ 0.74
USB1-208ENST00000563207 NOGQ13253 232 aa19.68■□□□□ 0.74
USB1-208ENST00000563207 CCDC57Q2TAC2 916 aa19.68■□□□□ 0.74
USB1-208ENST00000563207 ATF7IPQ6VMQ6 1270 aa19.68■□□□□ 0.74
USB1-208ENST00000563207 LDHAL6AQ6ZMR3 332 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms