RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 RASSF4Q9H2L5 321 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 DZANK1Q9NVP4 752 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 KANSL3Q9P2N6 904 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 FOXD3Q9UJU5 478 aaPredicted RBP5.29□□□□□ -1.56
CHD9-207ENST00000562806 PPME1Q9Y570 386 aa5.29□□□□□ -1.56
CHD9-207ENST00000562806 PDE2AO00408 941 aaPredicted RBP5.28□□□□□ -1.56
CHD9-207ENST00000562806 EIF1AYO14602 144 aaKnown RBP5.28□□□□□ -1.56
CHD9-207ENST00000562806 GPR182O15218 404 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 GDF11O95390 407 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 IGHA2P01877 340 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 ELNP15502 786 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 ITGAEP38570 1179 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 DSC3Q14574 896 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 GRIK5Q16478 980 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 CCDC27Q2M243 656 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 COL13A1Q5TAT6 717 aaPredicted RBP5.28□□□□□ -1.56
CHD9-207ENST00000562806 KIAA0319Q5VV43 1072 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 ALG1LQ6GMV1 187 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 ILDR2Q71H61 639 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 IL22RA1Q8N6P7 574 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 FRMD6Q96NE9 622 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 NLRP2Q9NX02 1062 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 TRAK1Q9UPV9 953 aa5.28□□□□□ -1.56
CHD9-207ENST00000562806 A0A0A0MRY4 1105 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 C9orf172C9J069 976 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 GIPC1O14908 333 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 IGHA1P01876 353 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 ARL4DP49703 201 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 NRG1Q02297 640 aaPredicted RBP5.27□□□□□ -1.57
CHD9-207ENST00000562806 GDF6Q6KF10 455 aaPredicted RBP5.27□□□□□ -1.57
CHD9-207ENST00000562806 FBXO11Q86XK2 927 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 FMR1NBQ8N0W7 255 aaPredicted RBP5.27□□□□□ -1.57
CHD9-207ENST00000562806 KLHL23Q8NBE8 558 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 BSNDQ8WZ55 320 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 CCDC74AQ96AQ1 378 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 BHLHE41Q9C0J9 482 aaPredicted RBP5.27□□□□□ -1.57
CHD9-207ENST00000562806 GZF1Q9H116 711 aaPredicted RBP5.27□□□□□ -1.57
CHD9-207ENST00000562806 BCL11AQ9H165 835 aa5.27□□□□□ -1.57
CHD9-207ENST00000562806 NFKBIEO00221 500 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 ATP11AP98196 1134 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 PTPN12Q05209 780 aaKnown RBP5.26□□□□□ -1.57
CHD9-207ENST00000562806 FMR1Q06787 632 aaKnown RBP eCLIP5.26□□□□□ -1.57
CHD9-207ENST00000562806 ENOX2Q16206 610 aaKnown RBP5.26□□□□□ -1.57
CHD9-207ENST00000562806 C8orf86Q6ZUL3 223 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 DMRTC2Q8IXT2 367 aaPredicted RBP5.26□□□□□ -1.57
CHD9-207ENST00000562806 DDX54Q8TDD1 881 aaKnown RBP5.26□□□□□ -1.57
CHD9-207ENST00000562806 NXPE3Q969Y0 559 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 DCAF5Q96JK2 942 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 POP1Q99575 1024 aaKnown RBP5.26□□□□□ -1.57
CHD9-207ENST00000562806 ZKSCAN3Q9BRR0 538 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 SRCIN1Q9C0H9 1055 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 SUV39H2Q9H5I1 410 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 OSGEPQ9NPF4 335 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 TRIM33Q9UPN9 1127 aa5.26□□□□□ -1.57
CHD9-207ENST00000562806 H3BRJ5 948 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 XRCC5P13010 732 aaKnown RBP5.25□□□□□ -1.57
CHD9-207ENST00000562806 PIP4K2BP78356 416 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 ORC1Q13415 861 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 IGF2-ASQ6U949 168 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 CCNJLQ8IV13 435 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 EHD4Q9H223 541 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 LIN7BQ9HAP6 207 aa5.25□□□□□ -1.57
CHD9-207ENST00000562806 PNMA6FA0A0J9YX94 578 aa5.24□□□□□ -1.57
CHD9-207ENST00000562806 A0A1W2PP55 124 aa5.24□□□□□ -1.57
CHD9-207ENST00000562806 GADD45BO75293 160 aaPredicted RBP5.24□□□□□ -1.57
CHD9-207ENST00000562806 COL8A1P27658 744 aa5.24□□□□□ -1.57
CHD9-207ENST00000562806 BAG6P46379 1132 aa5.24□□□□□ -1.57
CHD9-207ENST00000562806 PEAR1Q5VY43 1037 aaPredicted RBP5.24□□□□□ -1.57
CHD9-207ENST00000562806 LENG1Q96BZ8 264 aaPredicted RBP5.24□□□□□ -1.57
CHD9-207ENST00000562806 LACRTQ9GZZ8 138 aa5.24□□□□□ -1.57
CHD9-207ENST00000562806 SOX17Q9H6I2 414 aaPredicted RBP5.24□□□□□ -1.57
CHD9-207ENST00000562806 SPG7Q9UQ90 795 aa5.24□□□□□ -1.57
CHD9-207ENST00000562806 ANKRD33BA6NCL7 494 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 POLR3DP05423 398 aaPredicted RBP5.23□□□□□ -1.57
CHD9-207ENST00000562806 MAPK8P45983 427 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 GSK3AP49840 483 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 HNRNPUQ00839 825 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHD9-207ENST00000562806 EAPPQ56P03 285 aaPredicted RBP5.23□□□□□ -1.57
CHD9-207ENST00000562806 RPS26P11Q5JNZ5 115 aaPredicted RBP5.23□□□□□ -1.57
CHD9-207ENST00000562806 TMCO4Q5TGY1 634 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 PRPF40BQ6NWY9 871 aaKnown RBP5.23□□□□□ -1.57
CHD9-207ENST00000562806 MRPL18Q9H0U6 180 aaKnown RBP5.23□□□□□ -1.57
CHD9-207ENST00000562806 NPHS2Q9NP85 383 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 SEC31BQ9NQW1 1179 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 SOX13Q9UN79 622 aa5.23□□□□□ -1.57
CHD9-207ENST00000562806 A0A096LPE4 126 aa5.22□□□□□ -1.57
CHD9-207ENST00000562806 A0A1W2PPZ6 126 aa5.22□□□□□ -1.57
CHD9-207ENST00000562806 FSCN2O14926 492 aa5.22□□□□□ -1.57
CHD9-207ENST00000562806 IKBKEQ14164 716 aa5.22□□□□□ -1.57
CHD9-207ENST00000562806 SUZ12Q15022 739 aaKnown RBP5.22□□□□□ -1.57
CHD9-207ENST00000562806 HP1BP3Q5SSJ5 553 aaPredicted RBP5.22□□□□□ -1.57
CHD9-207ENST00000562806 USPL1Q5W0Q7 1092 aa5.22□□□□□ -1.57
CHD9-207ENST00000562806 ASAP3Q8TDY4 903 aa5.22□□□□□ -1.57
CHD9-207ENST00000562806 CLEC4MQ9H2X3 399 aaPredicted RBP5.22□□□□□ -1.57
CHD9-207ENST00000562806 KRBA1A5PL33 1030 aa5.21□□□□□ -1.58
CHD9-207ENST00000562806 LINC01387J3KSC0 135 aa5.21□□□□□ -1.58
CHD9-207ENST00000562806 DLL1O00548 723 aa5.21□□□□□ -1.58
CHD9-207ENST00000562806 PRPF40AO75400 957 aaKnown RBP5.21□□□□□ -1.58
CHD9-207ENST00000562806 ITPKAP23677 461 aa5.21□□□□□ -1.58
CHD9-207ENST00000562806 CD68P34810 354 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms