RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 MYOZ2Q9NPC6 264 aa23.61■■□□□ 1.37
TPM1-224ENST00000560615 FANCIQ9NVI1 1328 aa23.6■■□□□ 1.37
TPM1-224ENST00000560615 ZNF157P51786 506 aaPredicted RBP23.6■■□□□ 1.37
TPM1-224ENST00000560615 ANGEL2Q5VTE6 544 aaKnown RBP23.6■■□□□ 1.37
TPM1-224ENST00000560615 ABHD8Q96I13 439 aa23.6■■□□□ 1.37
TPM1-224ENST00000560615 ITGA6P23229 1130 aa23.59■■□□□ 1.37
TPM1-224ENST00000560615 FKBP1BP68106 108 aa23.59■■□□□ 1.37
TPM1-224ENST00000560615 SALL2Q9Y467 1007 aaPredicted RBP23.59■■□□□ 1.37
TPM1-224ENST00000560615 PITPNM2Q9BZ72 1349 aa23.59■■□□□ 1.37
TPM1-224ENST00000560615 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.37
TPM1-224ENST00000560615 VAMP4O75379 141 aa23.58■■□□□ 1.37
TPM1-224ENST00000560615 KCNJ4P48050 445 aa23.58■■□□□ 1.37
TPM1-224ENST00000560615 STRIP1Q5VSL9 837 aa23.58■■□□□ 1.37
TPM1-224ENST00000560615 FBXW7Q969H0 707 aa23.58■■□□□ 1.37
TPM1-224ENST00000560615 GMLQ99445 158 aa23.58■■□□□ 1.37
TPM1-224ENST00000560615 TSKSQ9UJT2 592 aa23.58■■□□□ 1.37
TPM1-224ENST00000560615 ANKRD18BA2A2Z9 1011 aa23.57■■□□□ 1.36
TPM1-224ENST00000560615 DLK2Q6UY11 383 aa23.57■■□□□ 1.36
TPM1-224ENST00000560615 REM2Q8IYK8 340 aaPredicted RBP23.57■■□□□ 1.36
TPM1-224ENST00000560615 CDCA5Q96FF9 252 aa23.57■■□□□ 1.36
TPM1-224ENST00000560615 ZNF804BA4D1E1 1349 aa23.57■■□□□ 1.36
TPM1-224ENST00000560615 CSF1RP07333 972 aa23.56■■□□□ 1.36
TPM1-224ENST00000560615 HDAC9Q9UKV0 1011 aa23.56■■□□□ 1.36
TPM1-224ENST00000560615 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
TPM1-224ENST00000560615 NF2P35240 595 aa23.54■■□□□ 1.36
TPM1-224ENST00000560615 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
TPM1-224ENST00000560615 FAM161AQ3B820 660 aa23.54■■□□□ 1.36
TPM1-224ENST00000560615 SAGE1Q9NXZ1 904 aa23.54■■□□□ 1.36
TPM1-224ENST00000560615 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
TPM1-224ENST00000560615 KIF23Q02241 960 aaPredicted RBP23.53■■□□□ 1.36
TPM1-224ENST00000560615 DACT2Q5SW24 774 aa23.53■■□□□ 1.36
TPM1-224ENST00000560615 TTLL5Q6EMB2 1281 aa23.53■■□□□ 1.36
TPM1-224ENST00000560615 ASTN2O75129 1339 aaPredicted RBP23.53■■□□□ 1.36
TPM1-224ENST00000560615 SLC10A3P09131 477 aa23.52■■□□□ 1.36
TPM1-224ENST00000560615 CASP7P55210 303 aa23.52■■□□□ 1.36
TPM1-224ENST00000560615 CHMP3Q9Y3E7 222 aa23.52■■□□□ 1.36
TPM1-224ENST00000560615 CCDC85CA6NKD9 419 aa23.51■■□□□ 1.35
TPM1-224ENST00000560615 CHRNDQ07001 517 aa23.51■■□□□ 1.35
TPM1-224ENST00000560615 SCN9AQ15858 1988 aa23.5■■□□□ 1.35
TPM1-224ENST00000560615 WTIPA6NIX2 430 aaPredicted RBP23.49■■□□□ 1.35
TPM1-224ENST00000560615 TTLL12Q14166 644 aaPredicted RBP23.49■■□□□ 1.35
TPM1-224ENST00000560615 CCDC57Q2TAC2 916 aa23.49■■□□□ 1.35
TPM1-224ENST00000560615 TAF7LQ5H9L4 462 aa23.49■■□□□ 1.35
TPM1-224ENST00000560615 BEND3Q5T5X7 828 aa23.49■■□□□ 1.35
TPM1-224ENST00000560615 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
TPM1-224ENST00000560615 ZIC5Q96T25 663 aa23.49■■□□□ 1.35
TPM1-224ENST00000560615 WNT10BO00744 389 aa23.48■■□□□ 1.35
TPM1-224ENST00000560615 GTF2IP78347 998 aa23.48■■□□□ 1.35
TPM1-224ENST00000560615 DGKZQ13574 1117 aa23.48■■□□□ 1.35
TPM1-224ENST00000560615 NBPF9Q3BBW0 867 aa23.48■■□□□ 1.35
TPM1-224ENST00000560615 TXNRD3Q86VQ6 643 aa23.48■■□□□ 1.35
TPM1-224ENST00000560615 C9orf78Q9NZ63 289 aaPredicted RBP23.48■■□□□ 1.35
TPM1-224ENST00000560615 ZNF804AQ7Z570 1209 aa23.47■■□□□ 1.35
TPM1-224ENST00000560615 APOBEC3FQ8IUX4 373 aaKnown RBP23.47■■□□□ 1.35
TPM1-224ENST00000560615 MCOLN1Q9GZU1 580 aa23.47■■□□□ 1.35
TPM1-224ENST00000560615 CD209Q9NNX6 404 aa23.47■■□□□ 1.35
TPM1-224ENST00000560615 MYH3P11055 1940 aa23.47■■□□□ 1.35
TPM1-224ENST00000560615 F6X3S4 739 aa23.46■■□□□ 1.35
TPM1-224ENST00000560615 GRM8O00222 908 aa23.46■■□□□ 1.35
TPM1-224ENST00000560615 C15orf52Q6ZUT6 534 aaKnown RBP23.46■■□□□ 1.35
TPM1-224ENST00000560615 KIAA0825Q8IV33 1275 aa23.46■■□□□ 1.35
TPM1-224ENST00000560615 MXD3Q9BW11 206 aa23.46■■□□□ 1.35
TPM1-224ENST00000560615 RNF186Q9NXI6 227 aa23.46■■□□□ 1.35
TPM1-224ENST00000560615 TRPA1O75762 1119 aa23.45■■□□□ 1.34
TPM1-224ENST00000560615 ALDH1L1O75891 902 aa23.45■■□□□ 1.34
TPM1-224ENST00000560615 FOXO4P98177 505 aa23.45■■□□□ 1.34
TPM1-224ENST00000560615 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
TPM1-224ENST00000560615 CSRNP1Q96S65 589 aa23.45■■□□□ 1.34
TPM1-224ENST00000560615 LDHAL6AQ6ZMR3 332 aa23.44■■□□□ 1.34
TPM1-224ENST00000560615 ARMC9Q7Z3E5 817 aa23.44■■□□□ 1.34
TPM1-224ENST00000560615 RASAL3Q86YV0 1011 aa23.44■■□□□ 1.34
TPM1-224ENST00000560615 SRCIN1Q9C0H9 1055 aa23.44■■□□□ 1.34
TPM1-224ENST00000560615 CNNM1Q9NRU3 951 aa23.44■■□□□ 1.34
TPM1-224ENST00000560615 PSME4Q14997 1843 aa23.43■■□□□ 1.34
TPM1-224ENST00000560615 MYO1BO43795 1136 aa23.43■■□□□ 1.34
TPM1-224ENST00000560615 DLGAP5Q15398 846 aa23.43■■□□□ 1.34
TPM1-224ENST00000560615 SLC4A10Q6U841 1118 aa23.43■■□□□ 1.34
TPM1-224ENST00000560615 TAF5LO75529 589 aa23.42■■□□□ 1.34
TPM1-224ENST00000560615 SASH1O94885 1247 aa23.42■■□□□ 1.34
TPM1-224ENST00000560615 KLRK1P26718 216 aa23.42■■□□□ 1.34
TPM1-224ENST00000560615 HELBQ8NG08 1087 aaPredicted RBP23.42■■□□□ 1.34
TPM1-224ENST00000560615 PAPPA2Q9BXP8 1791 aa23.42■■□□□ 1.34
TPM1-224ENST00000560615 CACNA1FO60840 1977 aa23.41■■□□□ 1.34
TPM1-224ENST00000560615 POLR2AP24928 1970 aaKnown RBP23.41■■□□□ 1.34
TPM1-224ENST00000560615 UBE2Q2LH0YL09 131 aa23.41■■□□□ 1.34
TPM1-224ENST00000560615 FKBP1AP62942 108 aaKnown RBP23.41■■□□□ 1.34
TPM1-224ENST00000560615 SPINK5Q9NQ38 1064 aaPredicted RBP23.41■■□□□ 1.34
TPM1-224ENST00000560615 MLLT1Q03111 559 aaPredicted RBP23.4■■□□□ 1.34
TPM1-224ENST00000560615 PRAMEF18Q5VWM3 479 aa23.4■■□□□ 1.34
TPM1-224ENST00000560615 SCAF8Q9UPN6 1271 aaKnown RBP23.4■■□□□ 1.34
TPM1-224ENST00000560615 PLIN1O60240 522 aa23.39■■□□□ 1.33
TPM1-224ENST00000560615 IL1R1P14778 569 aa23.39■■□□□ 1.33
TPM1-224ENST00000560615 PPP2R3BQ9Y5P8 575 aa23.39■■□□□ 1.33
TPM1-224ENST00000560615 SREBF2Q12772 1141 aa23.38■■□□□ 1.33
TPM1-224ENST00000560615 MTMR14Q8NCE2 650 aa23.38■■□□□ 1.33
TPM1-224ENST00000560615 SPEF2Q9C093 1822 aa23.38■■□□□ 1.33
TPM1-224ENST00000560615 RGS19P49795 217 aa23.37■■□□□ 1.33
TPM1-224ENST00000560615 MOB2Q70IA6 237 aa23.37■■□□□ 1.33
TPM1-224ENST00000560615 ZBED3Q96IU2 234 aaPredicted RBP23.37■■□□□ 1.33
TPM1-224ENST00000560615 COL1A1P02452 1464 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms