RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 USP17L3A6NCW0 530 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 USP17L4A6NCW7 530 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 KLRK1P26718 216 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 ALDH1L2Q3SY69 923 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 USP17L1Q7RTZ2 530 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 KAZALD1Q96I82 304 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 COA1Q9GZY4 146 aa21.54■■□□□ 1.04
LRRC28-210ENST00000558879 C9orf78Q9NZ63 289 aaPredicted RBP21.54■■□□□ 1.04
LRRC28-210ENST00000558879 NBPF7P0C2Y1 421 aaPredicted RBP21.53■■□□□ 1.04
LRRC28-210ENST00000558879 IFFO2Q5TF58 517 aa21.53■■□□□ 1.04
LRRC28-210ENST00000558879 SUCLG2Q96I99 432 aa21.53■■□□□ 1.04
LRRC28-210ENST00000558879 CHMP3Q9Y3E7 222 aa21.53■■□□□ 1.04
LRRC28-210ENST00000558879 CELF2O95319 508 aaKnown RBP21.52■■□□□ 1.04
LRRC28-210ENST00000558879 DACT2Q5SW24 774 aa21.52■■□□□ 1.04
LRRC28-210ENST00000558879 C15orf52Q6ZUT6 534 aaKnown RBP21.52■■□□□ 1.04
LRRC28-210ENST00000558879 WDR33Q9C0J8 1336 aaKnown RBP21.52■■□□□ 1.03
LRRC28-210ENST00000558879 PAPPA2Q9BXP8 1791 aa21.51■■□□□ 1.03
LRRC28-210ENST00000558879 CT47B1P0C2W7 299 aaPredicted RBP21.51■■□□□ 1.03
LRRC28-210ENST00000558879 RABL6Q3YEC7 729 aaPredicted RBP21.51■■□□□ 1.03
LRRC28-210ENST00000558879 STRIP1Q5VSL9 837 aa21.51■■□□□ 1.03
LRRC28-210ENST00000558879 SAPCD2Q86UD0 394 aa21.51■■□□□ 1.03
LRRC28-210ENST00000558879 MYO3BQ8WXR4 1341 aa21.51■■□□□ 1.03
LRRC28-210ENST00000558879 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
LRRC28-210ENST00000558879 HHIPL1Q96JK4 782 aa21.5■■□□□ 1.03
LRRC28-210ENST00000558879 GGA3Q9NZ52 723 aa21.5■■□□□ 1.03
LRRC28-210ENST00000558879 SNAP23O00161 211 aa21.49■■□□□ 1.03
LRRC28-210ENST00000558879 USP17L8P0C7I0 530 aa21.49■■□□□ 1.03
LRRC28-210ENST00000558879 COL13A1Q5TAT6 717 aaPredicted RBP21.49■■□□□ 1.03
LRRC28-210ENST00000558879 ZNF594Q96JF6 807 aaPredicted RBP21.49■■□□□ 1.03
LRRC28-210ENST00000558879 MYOZ2Q9NPC6 264 aa21.49■■□□□ 1.03
LRRC28-210ENST00000558879 ASTN2O75129 1339 aaPredicted RBP21.49■■□□□ 1.03
LRRC28-210ENST00000558879 ADM5C9JUS6 153 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 TAF5LO75529 589 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 RBM26Q5T8P6 1007 aaKnown RBP21.48■■□□□ 1.03
LRRC28-210ENST00000558879 KRT26Q7Z3Y9 468 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 USP48Q86UV5 1035 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 CAPNS2Q96L46 248 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 AKAP11Q9UKA4 1901 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 LAMB1P07942 1786 aa21.48■■□□□ 1.03
LRRC28-210ENST00000558879 FOXN1O15353 648 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 ECE1P42892 770 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 KCNJ4P48050 445 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 BRPF1P55201 1214 aaPredicted RBP21.47■■□□□ 1.03
LRRC28-210ENST00000558879 CYP4F22Q6NT55 531 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 DLK2Q6UY11 383 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 LDHAL6AQ6ZMR3 332 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 HELBQ8NG08 1087 aaPredicted RBP21.47■■□□□ 1.03
LRRC28-210ENST00000558879 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
LRRC28-210ENST00000558879 MXD3Q9BW11 206 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 BICC1Q9H694 974 aaKnown RBP21.47■■□□□ 1.03
LRRC28-210ENST00000558879 CD209Q9NNX6 404 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 SMC4Q9NTJ3 1288 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 WBP1LQ9NX94 342 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 PITPNM2Q9BZ72 1349 aa21.47■■□□□ 1.03
LRRC28-210ENST00000558879 ZNF408Q9H9D4 720 aa21.46■■□□□ 1.03
LRRC28-210ENST00000558879 TAF7LQ5H9L4 462 aa21.45■■□□□ 1.02
LRRC28-210ENST00000558879 USP44Q9H0E7 712 aa21.45■■□□□ 1.02
LRRC28-210ENST00000558879 CNNM1Q9NRU3 951 aa21.45■■□□□ 1.02
LRRC28-210ENST00000558879 IL1R1P14778 569 aa21.44■■□□□ 1.02
LRRC28-210ENST00000558879 MMP14P50281 582 aa21.44■■□□□ 1.02
LRRC28-210ENST00000558879 SCARF1Q14162 830 aa21.44■■□□□ 1.02
LRRC28-210ENST00000558879 ANGEL2Q5VTE6 544 aaKnown RBP21.44■■□□□ 1.02
LRRC28-210ENST00000558879 TTLL5Q6EMB2 1281 aa21.44■■□□□ 1.02
LRRC28-210ENST00000558879 SULF1Q8IWU6 871 aa21.43■■□□□ 1.02
LRRC28-210ENST00000558879 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
LRRC28-210ENST00000558879 PUS3Q9BZE2 481 aaKnown RBP21.43■■□□□ 1.02
LRRC28-210ENST00000558879 GTF2IP78347 998 aa21.42■■□□□ 1.02
LRRC28-210ENST00000558879 MAP2K1Q02750 393 aaPredicted RBP21.42■■□□□ 1.02
LRRC28-210ENST00000558879 PAXIP1Q6ZW49 1069 aaPredicted RBP21.42■■□□□ 1.02
LRRC28-210ENST00000558879 ZNF804AQ7Z570 1209 aa21.42■■□□□ 1.02
LRRC28-210ENST00000558879 GBA2Q9HCG7 927 aaPredicted RBP21.42■■□□□ 1.02
LRRC28-210ENST00000558879 RIPOR2Q9Y4F9 1068 aa21.42■■□□□ 1.02
LRRC28-210ENST00000558879 WNT10BO00744 389 aa21.41■■□□□ 1.02
LRRC28-210ENST00000558879 UBE4AQ14139 1066 aa21.41■■□□□ 1.02
LRRC28-210ENST00000558879 OGFOD1Q8N543 542 aa21.41■■□□□ 1.02
LRRC28-210ENST00000558879 CERS5Q8N5B7 392 aa21.41■■□□□ 1.02
LRRC28-210ENST00000558879 CDCA5Q96FF9 252 aa21.41■■□□□ 1.02
LRRC28-210ENST00000558879 COL1A1P02452 1464 aaPredicted RBP21.4■■□□□ 1.02
LRRC28-210ENST00000558879 MROH5Q6ZUA9 1318 aa21.4■■□□□ 1.02
LRRC28-210ENST00000558879 MAP2K2P36507 400 aa21.4■■□□□ 1.02
LRRC28-210ENST00000558879 FKBP1AP62942 108 aaKnown RBP21.4■■□□□ 1.02
LRRC28-210ENST00000558879 NBPF9Q3BBW0 867 aa21.4■■□□□ 1.02
LRRC28-210ENST00000558879 AIDAQ96BJ3 306 aa21.4■■□□□ 1.02
LRRC28-210ENST00000558879 ZBED3Q96IU2 234 aaPredicted RBP21.4■■□□□ 1.02
LRRC28-210ENST00000558879 OTOFQ9HC10 1997 aa21.39■■□□□ 1.02
LRRC28-210ENST00000558879 KIF16BQ96L93 1317 aa21.39■■□□□ 1.01
LRRC28-210ENST00000558879 AOC2O75106 756 aa21.39■■□□□ 1.01
LRRC28-210ENST00000558879 CTCFP49711 727 aaPredicted RBP21.39■■□□□ 1.01
LRRC28-210ENST00000558879 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
LRRC28-210ENST00000558879 HUNKP57058 714 aa21.39■■□□□ 1.01
LRRC28-210ENST00000558879 KIAA0825Q8IV33 1275 aa21.39■■□□□ 1.01
LRRC28-210ENST00000558879 VGLL2Q8N8G2 317 aa21.39■■□□□ 1.01
LRRC28-210ENST00000558879 PRDM10Q9NQV6 1147 aa21.39■■□□□ 1.01
LRRC28-210ENST00000558879 NOB1Q9ULX3 412 aaKnown RBP21.39■■□□□ 1.01
LRRC28-210ENST00000558879 PLIN1O60240 522 aa21.38■■□□□ 1.01
LRRC28-210ENST00000558879 GRM1Q13255 1194 aa21.38■■□□□ 1.01
LRRC28-210ENST00000558879 LRRC24Q50LG9 513 aa21.38■■□□□ 1.01
LRRC28-210ENST00000558879 CASP8AP2Q9UKL3 1982 aa21.37■■□□□ 1.01
LRRC28-210ENST00000558879 FAM205AQ6ZU69 1335 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms