RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 KCNJ4P48050 445 aa16.57■□□□□ 0.24
TPM1-215ENST00000558868 R3HDM1Q15032 1099 aaKnown RBP16.57■□□□□ 0.24
TPM1-215ENST00000558868 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
TPM1-215ENST00000558868 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
TPM1-215ENST00000558868 GNL3LQ9NVN8 582 aaKnown RBP16.57■□□□□ 0.24
TPM1-215ENST00000558868 TAF5LO75529 589 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
TPM1-215ENST00000558868 ZAP70P43403 619 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
TPM1-215ENST00000558868 SF3B2Q13435 895 aaKnown RBP16.55■□□□□ 0.24
TPM1-215ENST00000558868 GRAPQ13588 217 aa16.55■□□□□ 0.24
TPM1-215ENST00000558868 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
TPM1-215ENST00000558868 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
TPM1-215ENST00000558868 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
TPM1-215ENST00000558868 KCNB2Q92953 911 aa16.55■□□□□ 0.24
TPM1-215ENST00000558868 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
TPM1-215ENST00000558868 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
TPM1-215ENST00000558868 MCAMP43121 646 aa16.54■□□□□ 0.24
TPM1-215ENST00000558868 PHKA1P46020 1223 aa16.54■□□□□ 0.24
TPM1-215ENST00000558868 PTH1RQ03431 593 aa16.54■□□□□ 0.24
TPM1-215ENST00000558868 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
TPM1-215ENST00000558868 COL23A1Q86Y22 540 aaPredicted RBP16.54■□□□□ 0.24
TPM1-215ENST00000558868 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
TPM1-215ENST00000558868 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
TPM1-215ENST00000558868 RBM8AQ9Y5S9 174 aaKnown RBP16.54■□□□□ 0.24
TPM1-215ENST00000558868 HSP90AA1P07900 732 aaKnown RBP16.53■□□□□ 0.24
TPM1-215ENST00000558868 NEK4P51957 841 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 SCARF1Q14162 830 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 CCDC24Q8N4L8 307 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
TPM1-215ENST00000558868 PSMA5P28066 241 aa16.52■□□□□ 0.24
TPM1-215ENST00000558868 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.24
TPM1-215ENST00000558868 APPBP2Q92624 585 aa16.52■□□□□ 0.24
TPM1-215ENST00000558868 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.24
TPM1-215ENST00000558868 ANTXR1Q9H6X2 564 aa16.52■□□□□ 0.24
TPM1-215ENST00000558868 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
TPM1-215ENST00000558868 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
TPM1-215ENST00000558868 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 SEMA3EO15041 775 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 ZBTB22O15209 634 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 DDR1Q08345 913 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 KRT32Q14532 448 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 CREB3L3Q68CJ9 461 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 TMC4Q7Z404 712 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 ZNF589Q86UQ0 364 aaPredicted RBP16.51■□□□□ 0.23
TPM1-215ENST00000558868 VPS37DQ86XT2 251 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 A0A1B0GUL6 1792 aa16.51■□□□□ 0.23
TPM1-215ENST00000558868 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 UTRNP46939 3433 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 KLRG2A4D1S0 409 aaPredicted RBP16.5■□□□□ 0.23
TPM1-215ENST00000558868 BBOX1O75936 387 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 CYP2E1P05181 493 aaPredicted RBP16.5■□□□□ 0.23
TPM1-215ENST00000558868 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
TPM1-215ENST00000558868 BAG6P46379 1132 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 BCAMP50895 628 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 CRAMP1Q96RY5 1269 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
TPM1-215ENST00000558868 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 SLC27A2O14975 620 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 CD2BP2O95400 341 aaKnown RBP16.49■□□□□ 0.23
TPM1-215ENST00000558868 ADD2P35612 726 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 TSGA10IPQ3SY00 556 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 BRIP1Q9BX63 1249 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
TPM1-215ENST00000558868 MAST3O60307 1309 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
TPM1-215ENST00000558868 SLC15A2Q16348 729 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 PI16Q6UXB8 463 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
TPM1-215ENST00000558868 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
TPM1-215ENST00000558868 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
TPM1-215ENST00000558868 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
TPM1-215ENST00000558868 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
TPM1-215ENST00000558868 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 COL4A1P02462 1669 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 MYH7P12883 1935 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 CHD4Q14839 1912 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 TAF1P21675 1872 aa16.48■□□□□ 0.23
TPM1-215ENST00000558868 XDHP47989 1333 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
TPM1-215ENST00000558868 SNAP23O00161 211 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms