RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 HSP90B1P14625 803 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 ATP2B4P23634 1241 aa14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 USP17L1Q7RTZ2 530 aa14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 ANKRD18AQ8IVF6 992 aa14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 METTL22Q9BUU2 404 aaPredicted RBP14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 MXD3Q9BW11 206 aa14.3□□□□□ -0.12
RABGGTA-204ENST00000558376 ZNF646O15015 1829 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 FKBP1BP68106 108 aa14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 PITPNM2Q9BZ72 1349 aa14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 SPEF2Q9C093 1822 aa14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 IFT57Q9NWB7 429 aa14.29□□□□□ -0.12
RABGGTA-204ENST00000558376 PODNQ7Z5L7 613 aa14.28□□□□□ -0.12
RABGGTA-204ENST00000558376 TBC1D8O95759 1140 aa14.27□□□□□ -0.12
RABGGTA-204ENST00000558376 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.12
RABGGTA-204ENST00000558376 MYH3P11055 1940 aa14.27□□□□□ -0.12
RABGGTA-204ENST00000558376 IGKV5-2P06315 115 aa14.27□□□□□ -0.13
RABGGTA-204ENST00000558376 GNAI1P63096 354 aa14.27□□□□□ -0.13
RABGGTA-204ENST00000558376 DACT2Q5SW24 774 aa14.27□□□□□ -0.13
RABGGTA-204ENST00000558376 TTLL11Q8NHH1 800 aa14.27□□□□□ -0.13
RABGGTA-204ENST00000558376 HPS5Q9UPZ3 1129 aa14.27□□□□□ -0.13
RABGGTA-204ENST00000558376 MAP3K2Q9Y2U5 619 aa14.27□□□□□ -0.13
RABGGTA-204ENST00000558376 CTSWP56202 376 aa14.26□□□□□ -0.13
RABGGTA-204ENST00000558376 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
RABGGTA-204ENST00000558376 TSPYL6Q8N831 410 aa14.26□□□□□ -0.13
RABGGTA-204ENST00000558376 GREM2Q9H772 168 aa14.26□□□□□ -0.13
RABGGTA-204ENST00000558376 TRMT2AQ8IZ69 625 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 ZNF296Q8WUU4 475 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 CDC5LQ99459 802 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 BSDC1Q9NW68 430 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 MED23Q9ULK4 1368 aa14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 WNT10BO00744 389 aa14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 DDX58O95786 925 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 TM4SF4P48230 202 aa14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 CCDC30Q5VVM6 783 aa14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
RABGGTA-204ENST00000558376 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
RABGGTA-204ENST00000558376 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-204ENST00000558376 MKRN3Q13064 507 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-204ENST00000558376 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
RABGGTA-204ENST00000558376 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
RABGGTA-204ENST00000558376 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
RABGGTA-204ENST00000558376 PTPN12Q05209 780 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 STRIP1Q5VSL9 837 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 FBXW7Q969H0 707 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 R3HDMLQ9H3Y0 253 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 RCAN3Q9UKA8 241 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 HDAC9Q9UKV0 1011 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 E9PSI1 815 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 GPR25O00155 361 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 SASH1O94885 1247 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 KLRK1P26718 216 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 PKN2Q16513 984 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 CWF19L2Q2TBE0 894 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 WDR63Q8IWG1 891 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 COA1Q9GZY4 146 aa14.23□□□□□ -0.13
RABGGTA-204ENST00000558376 H7C1W4 665 aa14.22□□□□□ -0.13
RABGGTA-204ENST00000558376 PRKG1Q13976 671 aa14.22□□□□□ -0.13
RABGGTA-204ENST00000558376 G2E3Q7L622 706 aa14.22□□□□□ -0.13
RABGGTA-204ENST00000558376 OGFOD1Q8N543 542 aa14.22□□□□□ -0.13
RABGGTA-204ENST00000558376 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
RABGGTA-204ENST00000558376 ZBED3Q96IU2 234 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-204ENST00000558376 LEMD3Q9Y2U8 911 aa14.21□□□□□ -0.13
RABGGTA-204ENST00000558376 NEFLP07196 543 aa14.21□□□□□ -0.14
RABGGTA-204ENST00000558376 LDLRAD1Q5T700 205 aa14.21□□□□□ -0.14
RABGGTA-204ENST00000558376 PRPF38BQ5VTL8 546 aaKnown RBP14.21□□□□□ -0.14
RABGGTA-204ENST00000558376 TTLL5Q6EMB2 1281 aa14.21□□□□□ -0.14
RABGGTA-204ENST00000558376 TSR2Q969E8 191 aaKnown RBP14.21□□□□□ -0.14
RABGGTA-204ENST00000558376 MYO3BQ8WXR4 1341 aa14.2□□□□□ -0.14
RABGGTA-204ENST00000558376 NF2P35240 595 aa14.2□□□□□ -0.14
RABGGTA-204ENST00000558376 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-204ENST00000558376 UBE3BQ7Z3V4 1068 aa14.2□□□□□ -0.14
RABGGTA-204ENST00000558376 KIAA0825Q8IV33 1275 aa14.2□□□□□ -0.14
RABGGTA-204ENST00000558376 FZD1Q9UP38 647 aa14.2□□□□□ -0.14
RABGGTA-204ENST00000558376 ZNF804BA4D1E1 1349 aa14.19□□□□□ -0.14
RABGGTA-204ENST00000558376 PLIN1O60240 522 aa14.19□□□□□ -0.14
RABGGTA-204ENST00000558376 GTF2IP78347 998 aa14.19□□□□□ -0.14
RABGGTA-204ENST00000558376 ARMC9Q7Z3E5 817 aa14.19□□□□□ -0.14
RABGGTA-204ENST00000558376 IGHMBP2P38935 993 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 CASP7P55210 303 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 SPRYD7Q5W111 196 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 FBXO46Q6PJ61 603 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 CFHR5Q9BXR6 569 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 CHMP4AQ9BY43 222 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 SNAP23O00161 211 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 FKTNO75072 461 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 ITGA6P23229 1130 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 MMP14P50281 582 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 APOBEC3FQ8IUX4 373 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 ANGEL1Q9UNK9 670 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-204ENST00000558376 CSF1RP07333 972 aa14.17□□□□□ -0.14
RABGGTA-204ENST00000558376 SREBF2Q12772 1141 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms