RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 DCAF8Q5TAQ9 597 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 NUDCQ9Y266 331 aa13.25□□□□□ -0.29
ABCD4-227ENST00000557554 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
ABCD4-227ENST00000557554 UNCXA6NJT0 531 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 UFL1O94874 794 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
ABCD4-227ENST00000557554 GJA5P36382 358 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
ABCD4-227ENST00000557554 DACT2Q5SW24 774 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 UBE2Q1Q7Z7E8 422 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 ZBED3Q96IU2 234 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-227ENST00000557554 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 GGA1Q9UJY5 639 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
ABCD4-227ENST00000557554 DPF3Q92784 378 aa13.23□□□□□ -0.29
ABCD4-227ENST00000557554 SHISA4Q96DD7 197 aa13.23□□□□□ -0.29
ABCD4-227ENST00000557554 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
ABCD4-227ENST00000557554 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
ABCD4-227ENST00000557554 A0A1W2PPC1 479 aa13.22□□□□□ -0.29
ABCD4-227ENST00000557554 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
ABCD4-227ENST00000557554 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
ABCD4-227ENST00000557554 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
ABCD4-227ENST00000557554 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
ABCD4-227ENST00000557554 MYCP01106 439 aaPredicted RBP13.21□□□□□ -0.29
ABCD4-227ENST00000557554 MMP14P50281 582 aa13.21□□□□□ -0.29
ABCD4-227ENST00000557554 CNGB1Q14028 1251 aaPredicted RBP13.21□□□□□ -0.29
ABCD4-227ENST00000557554 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.29
ABCD4-227ENST00000557554 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
ABCD4-227ENST00000557554 COL25A1Q9BXS0 654 aaPredicted RBP13.21□□□□□ -0.29
ABCD4-227ENST00000557554 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
ABCD4-227ENST00000557554 SASH1O94885 1247 aa13.2□□□□□ -0.3
ABCD4-227ENST00000557554 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
ABCD4-227ENST00000557554 APOBEC3FQ8IUX4 373 aaKnown RBP13.2□□□□□ -0.3
ABCD4-227ENST00000557554 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
ABCD4-227ENST00000557554 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
ABCD4-227ENST00000557554 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
ABCD4-227ENST00000557554 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
ABCD4-227ENST00000557554 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-227ENST00000557554 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-227ENST00000557554 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-227ENST00000557554 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-227ENST00000557554 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
ABCD4-227ENST00000557554 PLBD2Q8NHP8 589 aa13.19□□□□□ -0.3
ABCD4-227ENST00000557554 XDHP47989 1333 aa13.18□□□□□ -0.3
ABCD4-227ENST00000557554 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
ABCD4-227ENST00000557554 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
ABCD4-227ENST00000557554 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
ABCD4-227ENST00000557554 MYO3BQ8WXR4 1341 aa13.17□□□□□ -0.3
ABCD4-227ENST00000557554 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
ABCD4-227ENST00000557554 ATP2B4P23634 1241 aa13.17□□□□□ -0.3
ABCD4-227ENST00000557554 MTFR1Q15390 333 aa13.17□□□□□ -0.3
ABCD4-227ENST00000557554 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
ABCD4-227ENST00000557554 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
ABCD4-227ENST00000557554 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
ABCD4-227ENST00000557554 PPP2R1AP30153 589 aa13.16□□□□□ -0.3
ABCD4-227ENST00000557554 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
ABCD4-227ENST00000557554 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
ABCD4-227ENST00000557554 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
ABCD4-227ENST00000557554 NR2E3Q9Y5X4 410 aa13.16□□□□□ -0.3
ABCD4-227ENST00000557554 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
ABCD4-227ENST00000557554 VCANP13611 3396 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 GJA8P48165 433 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
ABCD4-227ENST00000557554 TXNRD3Q86VQ6 643 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
ABCD4-227ENST00000557554 GNRH1P01148 92 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 KIAA0825Q8IV33 1275 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
ABCD4-227ENST00000557554 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 ZFYVE28Q9HCC9 887 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
ABCD4-227ENST00000557554 TLR2O60603 784 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 GJB1P08034 283 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
ABCD4-227ENST00000557554 TAF1CQ15572 869 aaPredicted RBP13.13□□□□□ -0.31
ABCD4-227ENST00000557554 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 MTMR10Q9NXD2 777 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
ABCD4-227ENST00000557554 CTGFP29279 349 aa13.12□□□□□ -0.31
ABCD4-227ENST00000557554 BMP8BP34820 402 aa13.12□□□□□ -0.31
ABCD4-227ENST00000557554 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
ABCD4-227ENST00000557554 PRMT2P55345 433 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms