RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 TRIM28Q13263 835 aaKnown RBP22.83■■□□□ 1.24
FOXN3-214ENST00000557258 NHSL1Q5SYE7 1610 aa22.82■■□□□ 1.24
FOXN3-214ENST00000557258 FOXP2O15409 715 aa22.82■■□□□ 1.24
FOXN3-214ENST00000557258 ITGB4P16144 1822 aa22.82■■□□□ 1.24
FOXN3-214ENST00000557258 DHX32Q7L7V1 743 aaKnown RBP22.82■■□□□ 1.24
FOXN3-214ENST00000557258 NAP1L5Q96NT1 182 aaPredicted RBP22.82■■□□□ 1.24
FOXN3-214ENST00000557258 FTOQ9C0B1 505 aaKnown RBP eCLIP22.82■■□□□ 1.246e-7■■■■■ 30.4
FOXN3-214ENST00000557258 AKAP2Q9Y2D5 859 aa22.82■■□□□ 1.24
FOXN3-214ENST00000557258 RIPOR2Q9Y4F9 1068 aa22.82■■□□□ 1.24
FOXN3-214ENST00000557258 DENND2AQ9ULE3 1009 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 RIC1Q4ADV7 1423 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 H3BQV1 296 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 LIG1P18858 919 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 KRT85P78386 507 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 SMIM5Q71RC9 77 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 DSCC1Q9BVC3 393 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 RFX7Q2KHR2 1363 aa22.81■■□□□ 1.24
FOXN3-214ENST00000557258 ANKRD18BA2A2Z9 1011 aa22.8■■□□□ 1.24
FOXN3-214ENST00000557258 IDH1O75874 414 aaKnown RBP22.8■■□□□ 1.24
FOXN3-214ENST00000557258 FAM184AQ8NB25 1140 aa22.8■■□□□ 1.24
FOXN3-214ENST00000557258 PHF14O94880 888 aa22.8■■□□□ 1.24
FOXN3-214ENST00000557258 PDCP20941 246 aa22.8■■□□□ 1.24
FOXN3-214ENST00000557258 USP25Q9UHP3 1055 aa22.8■■□□□ 1.24
FOXN3-214ENST00000557258 DISP2A7MBM2 1401 aa22.79■■□□□ 1.24
FOXN3-214ENST00000557258 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
FOXN3-214ENST00000557258 CTDNEP1O95476 244 aa22.79■■□□□ 1.24
FOXN3-214ENST00000557258 FGAP02671 866 aa22.79■■□□□ 1.24
FOXN3-214ENST00000557258 ATP6V1AP38606 617 aa22.79■■□□□ 1.24
FOXN3-214ENST00000557258 PHKA1P46020 1223 aa22.79■■□□□ 1.24
FOXN3-214ENST00000557258 ALDH8A1Q9H2A2 487 aaPredicted RBP22.78■■□□□ 1.24
FOXN3-214ENST00000557258 SEC31BQ9NQW1 1179 aa22.78■■□□□ 1.24
FOXN3-214ENST00000557258 PDLIM2Q96JY6 352 aa22.78■■□□□ 1.24
FOXN3-214ENST00000557258 SPATA32Q96LK8 384 aa22.78■■□□□ 1.24
FOXN3-214ENST00000557258 DDB1Q16531 1140 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 CKAP2LQ8IYA6 745 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 NKX2-3Q8TAU0 364 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 PLA2G12BQ9BX93 195 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 PTPDC1A2A3K4 754 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 KDM4AO75164 1064 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 PIP4K2BP78356 416 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 SLC9C2Q5TAH2 1124 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 ZSCAN30Q86W11 494 aa22.77■■□□□ 1.24
FOXN3-214ENST00000557258 GPAA1O43292 621 aa22.76■■□□□ 1.23
FOXN3-214ENST00000557258 SUSD4Q5VX71 490 aa22.76■■□□□ 1.23
FOXN3-214ENST00000557258 NSUN7Q8NE18 718 aaKnown RBP22.76■■□□□ 1.23
FOXN3-214ENST00000557258 PIH1D3Q9NQM4 214 aaKnown RBP22.76■■□□□ 1.23
FOXN3-214ENST00000557258 KCNQ2O43526 872 aa22.76■■□□□ 1.23
FOXN3-214ENST00000557258 MSNP26038 577 aaKnown RBP22.76■■□□□ 1.23
FOXN3-214ENST00000557258 EXOSC10Q01780 885 aaKnown RBP22.76■■□□□ 1.23
FOXN3-214ENST00000557258 APPP05067 770 aa22.75■■□□□ 1.23
FOXN3-214ENST00000557258 OTUD7BQ6GQQ9 843 aa22.75■■□□□ 1.23
FOXN3-214ENST00000557258 GOLGA6L4A6NEF3 574 aa22.75■■□□□ 1.23
FOXN3-214ENST00000557258 CRKLP46109 303 aaKnown RBP22.75■■□□□ 1.23
FOXN3-214ENST00000557258 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
FOXN3-214ENST00000557258 MARCH10Q8NA82 808 aaPredicted RBP22.75■■□□□ 1.23
FOXN3-214ENST00000557258 LEO1Q8WVC0 666 aaPredicted RBP22.75■■□□□ 1.23
FOXN3-214ENST00000557258 PFKFB2O60825 505 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 PTMAP06454 111 aaKnown RBP22.74■■□□□ 1.23
FOXN3-214ENST00000557258 ITPK1Q13572 414 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 INCENPQ9NQS7 918 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 GJB4Q9NTQ9 266 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 DACT1Q9NYF0 836 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.74■■□□□ 1.23
FOXN3-214ENST00000557258 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
FOXN3-214ENST00000557258 PDIA3P30101 505 aaKnown RBP22.74■■□□□ 1.23
FOXN3-214ENST00000557258 CSPP1Q1MSJ5 1256 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 CCDC102BQ68D86 513 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 INTS5Q6P9B9 1019 aaKnown RBP22.74■■□□□ 1.23
FOXN3-214ENST00000557258 STK11IPQ8N1F8 1099 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 VGLL2Q8N8G2 317 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 WWC3Q9ULE0 1092 aa22.74■■□□□ 1.23
FOXN3-214ENST00000557258 PDE8AO60658 829 aa22.73■■□□□ 1.23
FOXN3-214ENST00000557258 PDE8BO95263 885 aa22.73■■□□□ 1.23
FOXN3-214ENST00000557258 ZNF830Q96NB3 372 aaPredicted RBP22.73■■□□□ 1.23
FOXN3-214ENST00000557258 CDHR2Q9BYE9 1310 aa22.73■■□□□ 1.23
FOXN3-214ENST00000557258 LAMA4Q16363 1823 aa22.73■■□□□ 1.23
FOXN3-214ENST00000557258 HMGB1P09429 215 aaKnown RBP22.73■■□□□ 1.23
FOXN3-214ENST00000557258 APPBP2Q92624 585 aa22.73■■□□□ 1.23
FOXN3-214ENST00000557258 IQSEC3Q9UPP2 1182 aaPredicted RBP22.73■■□□□ 1.23
FOXN3-214ENST00000557258 SLIT2O94813 1529 aa22.72■■□□□ 1.23
FOXN3-214ENST00000557258 IL6STP40189 918 aaPredicted RBP22.72■■□□□ 1.23
FOXN3-214ENST00000557258 RESTQ13127 1097 aa22.72■■□□□ 1.23
FOXN3-214ENST00000557258 IMMTQ16891 758 aaKnown RBP22.72■■□□□ 1.23
FOXN3-214ENST00000557258 BICD2Q8TD16 824 aa22.72■■□□□ 1.23
FOXN3-214ENST00000557258 RXRAP19793 462 aa22.72■■□□□ 1.23
FOXN3-214ENST00000557258 PGBD1Q96JS3 809 aa22.72■■□□□ 1.23
FOXN3-214ENST00000557258 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
FOXN3-214ENST00000557258 LRP6O75581 1613 aa22.71■■□□□ 1.23
FOXN3-214ENST00000557258 LOC102724428A0A0B4J2F2 783 aa22.71■■□□□ 1.23
FOXN3-214ENST00000557258 SIK1P57059 783 aa22.71■■□□□ 1.23
FOXN3-214ENST00000557258 ZNF34Q8IZ26 560 aa22.71■■□□□ 1.23
FOXN3-214ENST00000557258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.71■■□□□ 1.23
FOXN3-214ENST00000557258 COL16A1Q07092 1604 aaPredicted RBP22.7■■□□□ 1.23
FOXN3-214ENST00000557258 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
FOXN3-214ENST00000557258 PRC1O43663 620 aa22.7■■□□□ 1.22
FOXN3-214ENST00000557258 NR1I2O75469 434 aa22.7■■□□□ 1.22
FOXN3-214ENST00000557258 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.22
FOXN3-214ENST00000557258 SPATA31A1Q5TZJ5 1347 aa22.69■■□□□ 1.22
FOXN3-214ENST00000557258 EIF5P55010 431 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms