RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CNTN3Q9P232 1028 aa9.25□□□□□ -0.93
HIF1A-209ENST00000556827 CC2D2AQ9P2K1 1620 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 LINC01387J3KSC0 135 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 CDC25BP30305 580 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 PRSS36Q5K4E3 855 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 TXNDC11Q6PKC3 985 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 Q8N3U1 123 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 SSBP4Q9BWG4 385 aaPredicted RBP9.24□□□□□ -0.93
HIF1A-209ENST00000556827 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
HIF1A-209ENST00000556827 FAM13AO94988 1023 aa9.23□□□□□ -0.93
HIF1A-209ENST00000556827 PTPRAP18433 802 aa9.23□□□□□ -0.93
HIF1A-209ENST00000556827 FAM117BQ6P1L5 589 aa9.23□□□□□ -0.93
HIF1A-209ENST00000556827 CEP120Q8N960 986 aa9.23□□□□□ -0.93
HIF1A-209ENST00000556827 C1orf127Q8N9H9 656 aa9.23□□□□□ -0.93
HIF1A-209ENST00000556827 POLIQ9UNA4 740 aa9.23□□□□□ -0.93
HIF1A-209ENST00000556827 SCO2A0A1W2PP80 73 aa9.22□□□□□ -0.93
HIF1A-209ENST00000556827 ZNF211Q13398 564 aaPredicted RBP9.22□□□□□ -0.93
HIF1A-209ENST00000556827 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
HIF1A-209ENST00000556827 XP32Q5T750 250 aa9.22□□□□□ -0.93
HIF1A-209ENST00000556827 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
HIF1A-209ENST00000556827 XKR5Q6UX68 686 aa9.22□□□□□ -0.93
HIF1A-209ENST00000556827 MEGF10Q96KG7 1140 aa9.22□□□□□ -0.93
HIF1A-209ENST00000556827 EIF4G1Q04637 1599 aaKnown RBP9.21□□□□□ -0.93
HIF1A-209ENST00000556827 ALX3O95076 343 aa9.21□□□□□ -0.94
HIF1A-209ENST00000556827 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.94
HIF1A-209ENST00000556827 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
HIF1A-209ENST00000556827 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
HIF1A-209ENST00000556827 BRD1O95696 1058 aa9.2□□□□□ -0.94
HIF1A-209ENST00000556827 USP5P45974 858 aa9.2□□□□□ -0.94
HIF1A-209ENST00000556827 SERPINB4P48594 390 aa9.2□□□□□ -0.94
HIF1A-209ENST00000556827 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
HIF1A-209ENST00000556827 AEBP1Q8IUX7 1158 aa9.2□□□□□ -0.94
HIF1A-209ENST00000556827 PMEPA1Q969W9 287 aa9.2□□□□□ -0.94
HIF1A-209ENST00000556827 SH2B1Q9NRF2 756 aaPredicted RBP9.2□□□□□ -0.94
HIF1A-209ENST00000556827 SALL4Q9UJQ4 1053 aa9.2□□□□□ -0.94
HIF1A-209ENST00000556827 PHACTR2O75167 634 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 ACPPP15309 386 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 GLB1P16278 677 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 NPR3P17342 541 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 EPHA1P21709 976 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 CD68P34810 354 aaPredicted RBP9.19□□□□□ -0.94
HIF1A-209ENST00000556827 CABP4P57796 275 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 AGGF1Q8N302 714 aaeCLIP9.19□□□□□ -0.94
HIF1A-209ENST00000556827 TMEM130Q8N3G9 435 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 GALNT11Q8NCW6 608 aa9.19□□□□□ -0.94
HIF1A-209ENST00000556827 POP1Q99575 1024 aaKnown RBP9.19□□□□□ -0.94
HIF1A-209ENST00000556827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.19□□□□□ -0.94
HIF1A-209ENST00000556827 FSCN2O14926 492 aa9.18□□□□□ -0.94
HIF1A-209ENST00000556827 EHHADHQ08426 723 aa9.18□□□□□ -0.94
HIF1A-209ENST00000556827 ADAMTSL4Q6UY14 1074 aa9.18□□□□□ -0.94
HIF1A-209ENST00000556827 TXNDC2Q86VQ3 553 aa9.18□□□□□ -0.94
HIF1A-209ENST00000556827 SNX29Q8TEQ0 813 aa9.18□□□□□ -0.94
HIF1A-209ENST00000556827 CHRDQ9H2X0 955 aa9.18□□□□□ -0.94
HIF1A-209ENST00000556827 PDE2AO00408 941 aaPredicted RBP9.17□□□□□ -0.94
HIF1A-209ENST00000556827 FOXD4L6Q3SYB3 417 aaPredicted RBP9.17□□□□□ -0.94
HIF1A-209ENST00000556827 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
HIF1A-209ENST00000556827 ACAD11Q709F0 780 aa9.17□□□□□ -0.94
HIF1A-209ENST00000556827 DZANK1Q9NVP4 752 aa9.17□□□□□ -0.94
HIF1A-209ENST00000556827 H3BRJ5 948 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 FZD6O60353 706 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 TNFRSF21O75509 655 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 TRPA1O75762 1119 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.16□□□□□ -0.94
HIF1A-209ENST00000556827 DZIP1LQ8IYY4 767 aaKnown RBP9.16□□□□□ -0.94
HIF1A-209ENST00000556827 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 ADAM19Q9H013 955 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 SEC31BQ9NQW1 1179 aa9.16□□□□□ -0.94
HIF1A-209ENST00000556827 EREGO14944 169 aa9.15□□□□□ -0.94
HIF1A-209ENST00000556827 WISP1O95388 367 aa9.15□□□□□ -0.94
HIF1A-209ENST00000556827 EDN3P14138 238 aa9.15□□□□□ -0.94
HIF1A-209ENST00000556827 HHIPQ96QV1 700 aa9.15□□□□□ -0.94
HIF1A-209ENST00000556827 CCDC87Q9NVE4 849 aa9.15□□□□□ -0.94
HIF1A-209ENST00000556827 KCNK4Q9NYG8 393 aa9.15□□□□□ -0.94
HIF1A-209ENST00000556827 FOXD3Q9UJU5 478 aaPredicted RBP9.15□□□□□ -0.94
HIF1A-209ENST00000556827 H3BRB1 525 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 DUOXA2Q1HG44 320 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 PRR23CQ6ZRP0 262 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 GLYCTKQ8IVS8 523 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 OSMRQ99650 979 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 TUT1Q9H6E5 874 aaKnown RBP9.14□□□□□ -0.95
HIF1A-209ENST00000556827 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
HIF1A-209ENST00000556827 NFKBIEO00221 500 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 Q6ZS46 218 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 GJD3Q8N144 294 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 CCER1Q8TC90 406 aaPredicted RBP9.13□□□□□ -0.95
HIF1A-209ENST00000556827 SLC7A3Q8WY07 619 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 ZKSCAN3Q9BRR0 538 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 CEP41Q9BYV8 373 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 EGFL7Q9UHF1 273 aa9.13□□□□□ -0.95
HIF1A-209ENST00000556827 ICMTO60725 284 aa9.12□□□□□ -0.95
HIF1A-209ENST00000556827 KCNA1Q09470 495 aa9.12□□□□□ -0.95
HIF1A-209ENST00000556827 TMEM102Q8N9M5 508 aaPredicted RBP9.12□□□□□ -0.95
HIF1A-209ENST00000556827 UBASH3BQ8TF42 649 aa9.12□□□□□ -0.95
HIF1A-209ENST00000556827 WNT8BQ93098 351 aa9.12□□□□□ -0.95
HIF1A-209ENST00000556827 KLHDC7BQ96G42 594 aa9.12□□□□□ -0.95
HIF1A-209ENST00000556827 AMOTL2Q9Y2J4 779 aa9.12□□□□□ -0.95
HIF1A-209ENST00000556827 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
HIF1A-209ENST00000556827 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
HIF1A-209ENST00000556827 GNEQ9Y223 722 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms