RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 STX6O43752 255 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 FSIP1Q8NA03 581 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 DBNDD2Q9BQY9 259 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.79
PTPN21-208ENST00000556564 CCDC129Q6ZRS4 1044 aa20.02■□□□□ 0.79
PTPN21-208ENST00000556564 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.79
PTPN21-208ENST00000556564 GDPD2Q9HCC8 539 aa20.02■□□□□ 0.79
PTPN21-208ENST00000556564 ATP7BP35670 1465 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 PPIP5K2O43314 1243 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 NBPF7P0C2Y1 421 aaPredicted RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 C2CD5Q86YS7 1000 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 UNC5CLQ8IV45 518 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 MCM4P33991 863 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 CRKLP46109 303 aaKnown RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 TRIM21P19474 475 aaKnown RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 RDXP35241 583 aaKnown RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 EAPPQ56P03 285 aaPredicted RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 GIGYF1O75420 1035 aaPredicted RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 CCDC171Q6TFL3 1326 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 TCIRG1Q13488 830 aa20.01■□□□□ 0.79
PTPN21-208ENST00000556564 LUC7LQ9NQ29 371 aaKnown RBP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 AATFQ9NY61 560 aaKnown RBP eCLIP20.01■□□□□ 0.79
PTPN21-208ENST00000556564 ZMYM4Q5VZL5 1548 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 RXRAP19793 462 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 FAM177A1Q8N128 213 aaPredicted RBP20■□□□□ 0.79
PTPN21-208ENST00000556564 FLAD1Q8NFF5 587 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 CTSWP56202 376 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 RRP36Q96EU6 259 aaKnown RBP20■□□□□ 0.79
PTPN21-208ENST00000556564 PICK1Q9NRD5 415 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 NEURL1BA8MQ27 555 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 IDEP14735 1019 aa20■□□□□ 0.79
PTPN21-208ENST00000556564 SSR1P43307 286 aaKnown RBP19.99■□□□□ 0.79
PTPN21-208ENST00000556564 SKIDA1Q1XH10 827 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 SPDYE4A6NLX3 237 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 CALM1P0DP23 149 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 CALM2P0DP24 149 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 CALM3P0DP25 149 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 CFAP100Q494V2 611 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 RTL9Q8NET4 1388 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 WDR17Q8IZU2 1322 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 TTC6Q86TZ1 520 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 CCP110O43303 1012 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 GNAQP50148 359 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 TCP10Q12799 353 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 NDUFB9Q9Y6M9 179 aa19.99■□□□□ 0.79
PTPN21-208ENST00000556564 ARHGAP27Q6ZUM4 889 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 TMEM87AQ8NBN3 555 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 SEPT12Q8IYM1 358 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 CCDC148Q8NFR7 591 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 PLEKHM2Q8IWE5 1019 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 MROH5Q6ZUA9 1318 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 ZYXQ15942 572 aaKnown RBP19.98■□□□□ 0.79
PTPN21-208ENST00000556564 LPIN2Q92539 896 aa19.98■□□□□ 0.79
PTPN21-208ENST00000556564 UBA7P41226 1012 aa19.97■□□□□ 0.79
PTPN21-208ENST00000556564 CREB3L3Q68CJ9 461 aa19.97■□□□□ 0.79
PTPN21-208ENST00000556564 TMX3Q96JJ7 454 aa19.97■□□□□ 0.79
PTPN21-208ENST00000556564 SYCP3Q8IZU3 236 aa19.97■□□□□ 0.79
PTPN21-208ENST00000556564 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
PTPN21-208ENST00000556564 WDR66Q8TBY9 1149 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 ISM2Q6H9L7 571 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 FILIP1Q7Z7B0 1213 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 CLTCL1P53675 1640 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 PNMA6EA0A0J9YXQ4 647 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 BIN1O00499 593 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 HELLSQ9NRZ9 838 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 MAST3O60307 1309 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 A2ML1A8K2U0 1454 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 BICD1Q96G01 975 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 GPCPD1Q9NPB8 672 aa19.96■□□□□ 0.79
PTPN21-208ENST00000556564 AMPD3Q01432 767 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 TRAF1Q13077 416 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 FAM43AQ8N2R8 423 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 SPATA5Q8NB90 893 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 CEP152O94986 1710 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 ENOX2Q16206 610 aaKnown RBP19.95■□□□□ 0.78
PTPN21-208ENST00000556564 FKBP15Q5T1M5 1219 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 ZNF397Q8NF99 534 aaPredicted RBP19.95■□□□□ 0.78
PTPN21-208ENST00000556564 CLTCQ00610 1675 aaKnown RBP19.95■□□□□ 0.78
PTPN21-208ENST00000556564 DESP17661 470 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 CCDC150Q8NCX0 1101 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 IQGAP3Q86VI3 1631 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 ARAP3Q8WWN8 1544 aa19.95■□□□□ 0.78
PTPN21-208ENST00000556564 RBM25P49756 843 aaKnown RBP19.94■□□□□ 0.78
PTPN21-208ENST00000556564 DOK7Q18PE1 504 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 TMOD4Q9NZQ9 345 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 CDC42BPGQ6DT37 1551 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 SPDYE3A6NKU9 549 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 CCDC183Q5T5S1 534 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.94■□□□□ 0.78
PTPN21-208ENST00000556564 OTUD7AQ8TE49 926 aaPredicted RBP19.94■□□□□ 0.78
PTPN21-208ENST00000556564 ANO10Q9NW15 660 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 RPS8P62241 208 aaKnown RBP19.94■□□□□ 0.78
PTPN21-208ENST00000556564 SYNMO15061 1565 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 GTF2IP78347 998 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 TBC1D32Q96NH3 1257 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 C6orf50Q9HD87 102 aa19.94■□□□□ 0.78
PTPN21-208ENST00000556564 POTEJP0CG39 1038 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms