RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CTSWP56202 376 aa17.86■□□□□ 0.45
SPTLC2-202ENST00000554365 USP17L1Q7RTZ2 530 aa17.86■□□□□ 0.45
SPTLC2-202ENST00000554365 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
SPTLC2-202ENST00000554365 ZNF609O15014 1411 aa17.85■□□□□ 0.45
SPTLC2-202ENST00000554365 CSRNP1Q96S65 589 aa17.85■□□□□ 0.45
SPTLC2-202ENST00000554365 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
SPTLC2-202ENST00000554365 SCAF8Q9UPN6 1271 aaKnown RBP17.85■□□□□ 0.45
SPTLC2-202ENST00000554365 WTIPA6NIX2 430 aaPredicted RBP17.84■□□□□ 0.45
SPTLC2-202ENST00000554365 EXOSC9Q06265 439 aaKnown RBP17.84■□□□□ 0.45
SPTLC2-202ENST00000554365 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
SPTLC2-202ENST00000554365 RASAL3Q86YV0 1011 aa17.84■□□□□ 0.45
SPTLC2-202ENST00000554365 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
SPTLC2-202ENST00000554365 GMLQ99445 158 aa17.84■□□□□ 0.45
SPTLC2-202ENST00000554365 PI4KAP2A4QPH2 592 aa17.83■□□□□ 0.44
SPTLC2-202ENST00000554365 IGKV5-2P06315 115 aa17.83■□□□□ 0.44
SPTLC2-202ENST00000554365 KSR2Q6VAB6 950 aa17.83■□□□□ 0.44
SPTLC2-202ENST00000554365 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
SPTLC2-202ENST00000554365 PI4KAP1Q8N8J0 262 aa17.83■□□□□ 0.44
SPTLC2-202ENST00000554365 PSME4Q14997 1843 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 SLC34A2O95436 690 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 CENPBP07199 599 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 FKBP1BP68106 108 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 MOB2Q70IA6 237 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 MXD3Q9BW11 206 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 GREM2Q9H772 168 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 MINPP1Q9UNW1 487 aa17.82■□□□□ 0.44
SPTLC2-202ENST00000554365 MED23Q9ULK4 1368 aa17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 CWF19L2Q2TBE0 894 aaKnown RBP17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 PRAMEF18Q5VWM3 479 aa17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 BSDC1Q9NW68 430 aaPredicted RBP17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 PAPPA2Q9BXP8 1791 aa17.81■□□□□ 0.44
SPTLC2-202ENST00000554365 AKAP11Q9UKA4 1901 aa17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 SPEF2Q9C093 1822 aa17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 UBE2Q2LH0YL09 131 aa17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 SOX10P56693 466 aa17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 TTLL12Q14166 644 aaPredicted RBP17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 OGFOD1Q8N543 542 aa17.8■□□□□ 0.44
SPTLC2-202ENST00000554365 DACT2Q5SW24 774 aa17.79■□□□□ 0.44
SPTLC2-202ENST00000554365 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
SPTLC2-202ENST00000554365 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
SPTLC2-202ENST00000554365 VAMP4O75379 141 aa17.78■□□□□ 0.44
SPTLC2-202ENST00000554365 IGHMBP2P38935 993 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-202ENST00000554365 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-202ENST00000554365 COA1Q9GZY4 146 aa17.78■□□□□ 0.44
SPTLC2-202ENST00000554365 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 WNT10BO00744 389 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 NF2P35240 595 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 G2E3Q7L622 706 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
SPTLC2-202ENST00000554365 SASH1O94885 1247 aa17.76■□□□□ 0.43
SPTLC2-202ENST00000554365 TBC1D8O95759 1140 aa17.76■□□□□ 0.43
SPTLC2-202ENST00000554365 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
SPTLC2-202ENST00000554365 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
SPTLC2-202ENST00000554365 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
SPTLC2-202ENST00000554365 MYH3P11055 1940 aa17.76■□□□□ 0.43
SPTLC2-202ENST00000554365 ZNF804BA4D1E1 1349 aa17.75■□□□□ 0.43
SPTLC2-202ENST00000554365 H7C1W4 665 aa17.75■□□□□ 0.43
SPTLC2-202ENST00000554365 ITGA6P23229 1130 aa17.75■□□□□ 0.43
SPTLC2-202ENST00000554365 MKRN3Q13064 507 aaKnown RBP17.75■□□□□ 0.43
SPTLC2-202ENST00000554365 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
SPTLC2-202ENST00000554365 HDAC9Q9UKV0 1011 aa17.75■□□□□ 0.43
SPTLC2-202ENST00000554365 KLRK1P26718 216 aa17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 PRKG1Q13976 671 aa17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 TTLL5Q6EMB2 1281 aa17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 KIAA0825Q8IV33 1275 aa17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 MPHOSPH8Q99549 860 aa17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
SPTLC2-202ENST00000554365 KCNJ4P48050 445 aa17.73■□□□□ 0.43
SPTLC2-202ENST00000554365 GTF2IP78347 998 aa17.73■□□□□ 0.43
SPTLC2-202ENST00000554365 GCKRQ14397 625 aa17.73■□□□□ 0.43
SPTLC2-202ENST00000554365 ZNF296Q8WUU4 475 aaPredicted RBP17.73■□□□□ 0.43
SPTLC2-202ENST00000554365 ZNF646O15015 1829 aaPredicted RBP17.72■□□□□ 0.43
SPTLC2-202ENST00000554365 FLIIQ13045 1269 aa17.72■□□□□ 0.43
SPTLC2-202ENST00000554365 ARMC9Q7Z3E5 817 aa17.72■□□□□ 0.43
SPTLC2-202ENST00000554365 APOBEC3FQ8IUX4 373 aaKnown RBP17.72■□□□□ 0.43
SPTLC2-202ENST00000554365 HPS5Q9UPZ3 1129 aa17.72■□□□□ 0.43
SPTLC2-202ENST00000554365 TM4SF4P48230 202 aa17.71■□□□□ 0.43
SPTLC2-202ENST00000554365 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
SPTLC2-202ENST00000554365 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
SPTLC2-202ENST00000554365 PLA2G12BQ9BX93 195 aa17.71■□□□□ 0.43
SPTLC2-202ENST00000554365 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
SPTLC2-202ENST00000554365 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
SPTLC2-202ENST00000554365 CSF1RP07333 972 aa17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 MMP14P50281 582 aa17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 CHRNDQ07001 517 aa17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 SREBF2Q12772 1141 aa17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 PKN2Q16513 984 aaKnown RBP17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 DNAAF4Q8WXU2 420 aa17.7■□□□□ 0.42
SPTLC2-202ENST00000554365 TNRC18O15417 2968 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms