RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 USP17L1Q7RTZ2 530 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 SH3TC2Q8TF17 1288 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.6■□□□□ 0.09
SNRPF-205ENST00000553192 TIMELESSQ9UNS1 1208 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 SASH1O94885 1247 aa15.59■□□□□ 0.09
SNRPF-205ENST00000553192 U2AF1L5P0DN76 240 aaPredicted RBP15.59■□□□□ 0.09
SNRPF-205ENST00000553192 U2AF1Q01081 240 aaKnown RBP eCLIP15.59■□□□□ 0.09
SNRPF-205ENST00000553192 UBE2Q1Q7Z7E8 422 aa15.59■□□□□ 0.09
SNRPF-205ENST00000553192 FAM89AQ96GI7 184 aa15.59■□□□□ 0.09
SNRPF-205ENST00000553192 PSME4Q14997 1843 aa15.59■□□□□ 0.09
SNRPF-205ENST00000553192 SSC5DA1L4H1 1573 aa15.58■□□□□ 0.09
SNRPF-205ENST00000553192 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
SNRPF-205ENST00000553192 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.08
SNRPF-205ENST00000553192 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
SNRPF-205ENST00000553192 GGA1Q9UJY5 639 aa15.58■□□□□ 0.08
SNRPF-205ENST00000553192 LAMB1P07942 1786 aa15.57■□□□□ 0.08
SNRPF-205ENST00000553192 A0A1W2PPC1 479 aa15.57■□□□□ 0.08
SNRPF-205ENST00000553192 EIF2S2P20042 333 aaKnown RBP15.57■□□□□ 0.08
SNRPF-205ENST00000553192 AIMP1Q12904 312 aaKnown RBP15.57■□□□□ 0.08
SNRPF-205ENST00000553192 DACT2Q5SW24 774 aa15.57■□□□□ 0.08
SNRPF-205ENST00000553192 PODNQ7Z5L7 613 aa15.57■□□□□ 0.08
SNRPF-205ENST00000553192 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
SNRPF-205ENST00000553192 ZBTB7BO15156 539 aaPredicted RBP15.56■□□□□ 0.08
SNRPF-205ENST00000553192 ANKIB1Q9P2G1 1089 aa15.56■□□□□ 0.08
SNRPF-205ENST00000553192 UNC80Q8N2C7 3258 aa15.55■□□□□ 0.08
SNRPF-205ENST00000553192 MTFR1Q15390 333 aa15.55■□□□□ 0.08
SNRPF-205ENST00000553192 OTUD7BQ6GQQ9 843 aa15.55■□□□□ 0.08
SNRPF-205ENST00000553192 APOBEC3FQ8IUX4 373 aaKnown RBP15.55■□□□□ 0.08
SNRPF-205ENST00000553192 ZBED3Q96IU2 234 aaPredicted RBP15.55■□□□□ 0.08
SNRPF-205ENST00000553192 ISCA1Q9BUE6 129 aa15.55■□□□□ 0.08
SNRPF-205ENST00000553192 RTL5Q5HYW3 569 aaPredicted RBP15.54■□□□□ 0.08
SNRPF-205ENST00000553192 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
SNRPF-205ENST00000553192 DEFB129Q9H1M3 183 aa15.54■□□□□ 0.08
SNRPF-205ENST00000553192 NUDCQ9Y266 331 aa15.54■□□□□ 0.08
SNRPF-205ENST00000553192 OGFOD1Q8N543 542 aa15.53■□□□□ 0.08
SNRPF-205ENST00000553192 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
SNRPF-205ENST00000553192 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
SNRPF-205ENST00000553192 STXBP5LQ9Y2K9 1186 aa15.53■□□□□ 0.08
SNRPF-205ENST00000553192 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.08
SNRPF-205ENST00000553192 ARHGEF6Q15052 776 aa15.52■□□□□ 0.08
SNRPF-205ENST00000553192 Q7L0L9 218 aa15.52■□□□□ 0.08
SNRPF-205ENST00000553192 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
SNRPF-205ENST00000553192 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
SNRPF-205ENST00000553192 IRS4O14654 1257 aaPredicted RBP15.51■□□□□ 0.07
SNRPF-205ENST00000553192 BRI3BPQ8WY22 251 aa15.51■□□□□ 0.07
SNRPF-205ENST00000553192 HTATIP2Q9BUP3 242 aa15.51■□□□□ 0.07
SNRPF-205ENST00000553192 STAP2Q9UGK3 403 aa15.51■□□□□ 0.07
SNRPF-205ENST00000553192 NR2E3Q9Y5X4 410 aa15.51■□□□□ 0.07
SNRPF-205ENST00000553192 COL1A1P02452 1464 aaPredicted RBP15.51■□□□□ 0.07
SNRPF-205ENST00000553192 XDHP47989 1333 aa15.5■□□□□ 0.07
SNRPF-205ENST00000553192 MYO3BQ8WXR4 1341 aa15.5■□□□□ 0.07
SNRPF-205ENST00000553192 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
SNRPF-205ENST00000553192 USP2O75604 605 aaPredicted RBP15.5■□□□□ 0.07
SNRPF-205ENST00000553192 ATP2B4P23634 1241 aa15.5■□□□□ 0.07
SNRPF-205ENST00000553192 GJA8P48165 433 aa15.5■□□□□ 0.07
SNRPF-205ENST00000553192 STRIP1Q5VSL9 837 aa15.5■□□□□ 0.07
SNRPF-205ENST00000553192 DEFB123Q8N688 67 aa15.5■□□□□ 0.07
SNRPF-205ENST00000553192 TAF1CQ15572 869 aaPredicted RBP15.49■□□□□ 0.07
SNRPF-205ENST00000553192 GPR153Q6NV75 609 aa15.49■□□□□ 0.07
SNRPF-205ENST00000553192 FAM43AQ8N2R8 423 aa15.49■□□□□ 0.07
SNRPF-205ENST00000553192 TSPYL4Q9UJ04 414 aa15.49■□□□□ 0.07
SNRPF-205ENST00000553192 ZSWIM8A7E2V4 1837 aa15.49■□□□□ 0.07
SNRPF-205ENST00000553192 NBPF12Q5TAG4 269 aaPredicted RBP15.48■□□□□ 0.07
SNRPF-205ENST00000553192 KIAA0825Q8IV33 1275 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 OPTNQ96CV9 577 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 ZFYVE28Q9HCC9 887 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 MTMR10Q9NXD2 777 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 MED23Q9ULK4 1368 aa15.48■□□□□ 0.07
SNRPF-205ENST00000553192 GJB1P08034 283 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 VCANP13611 3396 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 MMP14P50281 582 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 LACTBP83111 547 aaPredicted RBP15.47■□□□□ 0.07
SNRPF-205ENST00000553192 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNRPF-205ENST00000553192 ANKRD13AQ8IZ07 590 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
SNRPF-205ENST00000553192 CTGFP29279 349 aa15.46■□□□□ 0.07
SNRPF-205ENST00000553192 TXNRD3Q86VQ6 643 aa15.46■□□□□ 0.07
SNRPF-205ENST00000553192 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
SNRPF-205ENST00000553192 ELP3Q9H9T3 547 aa15.46■□□□□ 0.07
SNRPF-205ENST00000553192 PPP2R3BQ9Y5P8 575 aa15.46■□□□□ 0.07
SNRPF-205ENST00000553192 DLG5Q8TDM6 1919 aa15.46■□□□□ 0.07
SNRPF-205ENST00000553192 ZNF804BA4D1E1 1349 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 AOX1Q06278 1338 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 CCL15-CCL14A0A0B4J2E2 113 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 IREB2P48200 963 aaKnown RBP15.45■□□□□ 0.06
SNRPF-205ENST00000553192 TRIM28Q13263 835 aaKnown RBP15.45■□□□□ 0.06
SNRPF-205ENST00000553192 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 CCL15Q16663 113 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 SUPT20HL1Q3ZLR7 823 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 ANKRD13DQ6ZTN6 518 aa15.45■□□□□ 0.06
SNRPF-205ENST00000553192 CCDC85AQ96PX6 553 aaPredicted RBP15.45■□□□□ 0.06
SNRPF-205ENST00000553192 SPTBN5Q9NRC6 3674 aaKnown RBP15.45■□□□□ 0.06
SNRPF-205ENST00000553192 TLR2O60603 784 aa15.44■□□□□ 0.06
SNRPF-205ENST00000553192 CCL5P13501 91 aa15.44■□□□□ 0.06
SNRPF-205ENST00000553192 PRMT2P55345 433 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms