RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
LETMD1-234ENST00000552645 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
LETMD1-234ENST00000552645 RAD17O75943 681 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 ATG9AQ7Z3C6 839 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 TXNRD3Q86VQ6 643 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 ZNF784Q8NCA9 323 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-234ENST00000552645 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 CEP126Q9P2H0 1117 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
LETMD1-234ENST00000552645 MED23Q9ULK4 1368 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 APBB1O00213 710 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 CIAO1O76071 339 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-234ENST00000552645 PDE8BO95263 885 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-234ENST00000552645 POLA2Q14181 598 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
LETMD1-234ENST00000552645 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-234ENST00000552645 KDM2BQ8NHM5 1336 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 SCN9AQ15858 1988 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 GLTPD2A6NH11 291 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 YDJCA8MPS7 323 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 FZD9O00144 591 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 HMMRO75330 724 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 TFCP2Q12800 502 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 PUM3Q15397 648 aaKnown RBP12.28□□□□□ -0.44
LETMD1-234ENST00000552645 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
LETMD1-234ENST00000552645 KCNQ5Q9NR82 932 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
LETMD1-234ENST00000552645 GYG1P46976 350 aa12.27□□□□□ -0.44
LETMD1-234ENST00000552645 CXCL9Q07325 125 aa12.27□□□□□ -0.44
LETMD1-234ENST00000552645 UBE4AQ14139 1066 aa12.27□□□□□ -0.44
LETMD1-234ENST00000552645 VPS37DQ86XT2 251 aa12.27□□□□□ -0.44
LETMD1-234ENST00000552645 VGLL2Q8N8G2 317 aa12.27□□□□□ -0.44
LETMD1-234ENST00000552645 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.44
LETMD1-234ENST00000552645 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.44
LETMD1-234ENST00000552645 SLC5A1P13866 664 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 ATP2B3Q16720 1220 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 ZNF804AQ7Z570 1209 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 SIRT2Q8IXJ6 389 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 NMRK2Q9NPI5 230 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
LETMD1-234ENST00000552645 TNIP1Q15025 636 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 GPC2Q8N158 579 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 COA1Q9GZY4 146 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
LETMD1-234ENST00000552645 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
LETMD1-234ENST00000552645 PSMD14O00487 310 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 FRAT2O75474 233 aaPredicted RBP12.25□□□□□ -0.45
LETMD1-234ENST00000552645 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
LETMD1-234ENST00000552645 TIMM10P62072 90 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 PODNQ7Z5L7 613 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 LPIN2Q92539 896 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 CD209Q9NNX6 404 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
LETMD1-234ENST00000552645 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
LETMD1-234ENST00000552645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.25□□□□□ -0.45
LETMD1-234ENST00000552645 PSME4Q14997 1843 aa12.25□□□□□ -0.45
LETMD1-234ENST00000552645 SASH1O94885 1247 aa12.24□□□□□ -0.45
LETMD1-234ENST00000552645 BCAMP50895 628 aa12.24□□□□□ -0.45
LETMD1-234ENST00000552645 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
LETMD1-234ENST00000552645 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
LETMD1-234ENST00000552645 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
LETMD1-234ENST00000552645 A0A1B0GUL7 405 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 USP17L3A6NCW0 530 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 USP17L4A6NCW7 530 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 FGFR2P21802 821 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
LETMD1-234ENST00000552645 ADORA1P30542 326 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 GMPSP49915 693 aaPredicted RBP12.23□□□□□ -0.45
LETMD1-234ENST00000552645 GTF2IP78347 998 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 C15orf52Q6ZUT6 534 aaKnown RBP12.23□□□□□ -0.45
LETMD1-234ENST00000552645 USP17L1Q7RTZ2 530 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 IRS2Q9Y4H2 1338 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 WDR90Q96KV7 1748 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 ARAP2Q8WZ64 1704 aa12.23□□□□□ -0.45
LETMD1-234ENST00000552645 VEGFAP15692 232 aaPredicted RBP12.22□□□□□ -0.45
LETMD1-234ENST00000552645 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
LETMD1-234ENST00000552645 HSP90AB4PQ58FF6 505 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
LETMD1-234ENST00000552645 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 IL1RAPL2Q9NP60 686 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 SCN4AP35499 1836 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 XAGE2Q96GT9 111 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 ZNF609O15014 1411 aa12.22□□□□□ -0.45
LETMD1-234ENST00000552645 IQCA1LA6NCM1 817 aa12.21□□□□□ -0.46
LETMD1-234ENST00000552645 IL1R1P14778 569 aa12.21□□□□□ -0.46
LETMD1-234ENST00000552645 EPS15P42566 896 aa12.21□□□□□ -0.46
LETMD1-234ENST00000552645 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.46
LETMD1-234ENST00000552645 TNNI3KQ59H18 835 aa12.21□□□□□ -0.46
LETMD1-234ENST00000552645 FBXO33Q7Z6M2 555 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms