RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 PDE8AO60658 829 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 TOM1O60784 492 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 PDCP20941 246 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 RPS6KB1P23443 525 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 CTSWP56202 376 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF445P59923 1031 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 PARP10Q53GL7 1025 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 CCDC158Q5M9N0 1113 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 LMBRD1Q9NUN5 540 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 DDX49Q9Y6V7 483 aaKnown RBP8.14□□□□□ -1.11
CCDC59-206ENST00000552412 BCORQ6W2J9 1755 aa8.14□□□□□ -1.11
CCDC59-206ENST00000552412 COL5A3P25940 1745 aaPredicted RBP8.14□□□□□ -1.11
CCDC59-206ENST00000552412 RIC1Q4ADV7 1423 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 A0A1B0GUL7 405 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 ANKRD18BA2A2Z9 1011 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 IFIT1P09914 478 aaKnown RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 EIF5P55010 431 aaKnown RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 PKP1Q13835 747 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 TAF7LQ5H9L4 462 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 ZMYM1Q5SVZ6 1142 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF589Q86UQ0 364 aaPredicted RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF34Q8IZ26 560 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 SYAP1Q96A49 352 aaPredicted RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 TMEM121BQ9BXQ6 578 aaPredicted RBP8.13□□□□□ -1.11
CCDC59-206ENST00000552412 CCDC87Q9NVE4 849 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 SMC3Q9UQE7 1217 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 ZBTB1Q9Y2K1 713 aa8.13□□□□□ -1.11
CCDC59-206ENST00000552412 ATRNO75882 1429 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
CCDC59-206ENST00000552412 RNF113AO15541 343 aaKnown RBP8.12□□□□□ -1.11
CCDC59-206ENST00000552412 STX6O43752 255 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 ZSCAN22P10073 491 aaPredicted RBP8.12□□□□□ -1.11
CCDC59-206ENST00000552412 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
CCDC59-206ENST00000552412 ADCK5Q3MIX3 580 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 LRRC24Q50LG9 513 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 ZSCAN25Q6NSZ9 544 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 FBXL16Q8N461 479 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 TTLL11Q8NHH1 800 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 NEUROD6Q96NK8 337 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 DNAJC2Q99543 621 aaKnown RBP8.12□□□□□ -1.11
CCDC59-206ENST00000552412 MFRPQ9BY79 579 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 RIPOR2Q9Y4F9 1068 aa8.12□□□□□ -1.11
CCDC59-206ENST00000552412 AKAP11Q9UKA4 1901 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 LOC102724428A0A0B4J2F2 783 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 GOLIM4O00461 696 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 PHF14O94880 888 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 ITGA6P23229 1130 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 SIK1P57059 783 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 TTF1Q15361 905 aaPredicted RBP8.11□□□□□ -1.11
CCDC59-206ENST00000552412 HLFQ16534 295 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 ATP2B3Q16720 1220 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 TTC39AQ5SRH9 613 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 CLEC4GQ6UXB4 293 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
CCDC59-206ENST00000552412 MARVELD3Q96A59 401 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 FAM89AQ96GI7 184 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 NEK1Q96PY6 1258 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC59-206ENST00000552412 GRPEL1Q9HAV7 217 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 PCDH10Q9P2E7 1040 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 CTNNA3Q9UI47 895 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF652Q9Y2D9 606 aa8.11□□□□□ -1.11
CCDC59-206ENST00000552412 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 MYH14Q7Z406 1995 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 DDX60Q8IY21 1712 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 TCHHQ07283 1943 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 F13A1P00488 732 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 UQCRFS1P1P0C7P4 283 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 XRCC6P12956 609 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 SYT1P21579 422 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 CRKLP46109 303 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 TIMM10P62072 90 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 VPS72Q15906 364 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 METTL24Q5JXM2 366 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 GORABQ5T7V8 394 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 INTS5Q6P9B9 1019 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 LDHAL6AQ6ZMR3 332 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF710Q8N1W2 664 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 VGLL2Q8N8G2 317 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 RGS22Q8NE09 1264 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 FBXO22Q8NEZ5 403 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 APPBP2Q92624 585 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 SYTL4Q96C24 671 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF594Q96JF6 807 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 LLPHQ9BRT6 129 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 AGXT2Q9BYV1 514 aa8.1□□□□□ -1.11
CCDC59-206ENST00000552412 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 TRMT112Q9UI30 125 aaKnown RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 ZNF330Q9Y3S2 320 aaPredicted RBP8.1□□□□□ -1.11
CCDC59-206ENST00000552412 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms