RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 NFIXQ14938 502 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 TPTE2Q6XPS3 522 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 TM6SF1Q9BZW5 370 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 TAF6LQ9Y6J9 622 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-216ENST00000552341 TM4SF1P30408 202 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 TSGA10IPQ3SY00 556 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-216ENST00000552341 RPAP1Q9BWH6 1393 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-216ENST00000552341 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-216ENST00000552341 CUL4AQ13619 759 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 COL9A3Q14050 684 aaPredicted RBP13.03□□□□□ -0.32
PFDN5-216ENST00000552341 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
PFDN5-216ENST00000552341 MAST3O60307 1309 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
PFDN5-216ENST00000552341 HSP90AA1P07900 732 aaKnown RBP13.02□□□□□ -0.32
PFDN5-216ENST00000552341 GYS1P13807 737 aa13.02□□□□□ -0.32
PFDN5-216ENST00000552341 SLC5A1P13866 664 aa13.02□□□□□ -0.32
PFDN5-216ENST00000552341 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.32
PFDN5-216ENST00000552341 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.32
PFDN5-216ENST00000552341 OSBP2Q969R2 916 aa13.02□□□□□ -0.32
PFDN5-216ENST00000552341 NLRP3Q96P20 1036 aa13.02□□□□□ -0.32
PFDN5-216ENST00000552341 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
PFDN5-216ENST00000552341 M0R2C6 588 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 PLSCR1O15162 318 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 CPA1P15085 419 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 CASTP20810 708 aaKnown RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 FOXP2O15409 715 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 ZFYP08048 801 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
PFDN5-216ENST00000552341 DSCC1Q9BVC3 393 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
PFDN5-216ENST00000552341 KCNJ4P48050 445 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 AK2P54819 239 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 RASGRF1Q13972 1273 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 RUFY3Q7L099 469 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
PFDN5-216ENST00000552341 PIH1D3Q9NQM4 214 aaKnown RBP13□□□□□ -0.33
PFDN5-216ENST00000552341 U3KPZ7 1027 aaPredicted RBP13□□□□□ -0.33
PFDN5-216ENST00000552341 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
PFDN5-216ENST00000552341 RXRBP28702 533 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 BCAMP50895 628 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
PFDN5-216ENST00000552341 RNF20Q5VTR2 975 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 SPATA5Q8NB90 893 aa13□□□□□ -0.33
PFDN5-216ENST00000552341 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
PFDN5-216ENST00000552341 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
PFDN5-216ENST00000552341 CYP21A2P08686 494 aa12.99□□□□□ -0.33
PFDN5-216ENST00000552341 ADD2P35612 726 aa12.99□□□□□ -0.33
PFDN5-216ENST00000552341 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
PFDN5-216ENST00000552341 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-216ENST00000552341 LRRFIP1Q32MZ4 808 aaKnown RBP12.99□□□□□ -0.33
PFDN5-216ENST00000552341 APPBP2Q92624 585 aa12.99□□□□□ -0.33
PFDN5-216ENST00000552341 INTS4Q96HW7 963 aaKnown RBP12.99□□□□□ -0.33
PFDN5-216ENST00000552341 PUS7LQ9H0K6 701 aaKnown RBP12.99□□□□□ -0.33
PFDN5-216ENST00000552341 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
PFDN5-216ENST00000552341 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
PFDN5-216ENST00000552341 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
PFDN5-216ENST00000552341 PRR5LQ6MZQ0 368 aa12.98□□□□□ -0.33
PFDN5-216ENST00000552341 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
PFDN5-216ENST00000552341 LAMA4Q16363 1823 aa12.98□□□□□ -0.33
PFDN5-216ENST00000552341 TCRBV5S4A2TA0A5A2 114 aa12.98□□□□□ -0.33
PFDN5-216ENST00000552341 NOL8Q76FK4 1167 aaKnown RBP12.98□□□□□ -0.33
PFDN5-216ENST00000552341 CNBD1Q8NA66 436 aa12.98□□□□□ -0.33
PFDN5-216ENST00000552341 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
PFDN5-216ENST00000552341 ALDH8A1Q9H2A2 487 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-216ENST00000552341 APBA3O96018 575 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 PSMA5P28066 241 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 PKP1Q13835 747 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 UBE3CQ15386 1083 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 SLC9C2Q5TAH2 1124 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.338e-7■□□□□ 9.6
PFDN5-216ENST00000552341 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 RGPD3A6NKT7 1758 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-216ENST00000552341 RGPD4Q7Z3J3 1758 aa12.97□□□□□ -0.33
PFDN5-216ENST00000552341 A0A0G2JLW4 131 aa12.96□□□□□ -0.33
PFDN5-216ENST00000552341 RPS6KB1P23443 525 aa12.96□□□□□ -0.33
PFDN5-216ENST00000552341 DDR1Q08345 913 aa12.96□□□□□ -0.33
PFDN5-216ENST00000552341 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
PFDN5-216ENST00000552341 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
PFDN5-216ENST00000552341 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
PFDN5-216ENST00000552341 COL1A1P02452 1464 aaPredicted RBP12.96□□□□□ -0.34
PFDN5-216ENST00000552341 SERPINB2P05120 415 aa12.96□□□□□ -0.34
PFDN5-216ENST00000552341 PDE6AP16499 860 aa12.96□□□□□ -0.34
PFDN5-216ENST00000552341 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.34
PFDN5-216ENST00000552341 GYG1P46976 350 aa12.96□□□□□ -0.34
PFDN5-216ENST00000552341 KRT32Q14532 448 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms