RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DUSP27Q5VZP5 1158 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 USP50Q70EL3 339 aaPredicted RBP8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 SAPCD2Q86UD0 394 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 MXD3Q9BW11 206 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 MBIPQ9NS73 344 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 TLL2Q9Y6L7 1015 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 SH3TC1Q8TE82 1336 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 IBTKQ9P2D0 1353 aaPredicted RBP8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 CASP8AP2Q9UKL3 1982 aa8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 TNRC18O15417 2968 aaPredicted RBP8.93□□□□□ -0.98
PRPF40B-214ENST00000551320 RTL9Q8NET4 1388 aa8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 IRS4O14654 1257 aaPredicted RBP8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 BBOX1O75936 387 aa8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 MAP3K9P80192 1104 aa8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 CCDC184Q52MB2 194 aa8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 PRAMEF18Q5VWM3 479 aa8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 ANKRD13DQ6ZTN6 518 aa8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 RTFDC1Q9BY42 306 aaPredicted RBP8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 TMX4Q9H1E5 349 aaPredicted RBP8.92□□□□□ -0.98
PRPF40B-214ENST00000551320 DDX60Q8IY21 1712 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 APAF1O14727 1248 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 ECE2O60344 883 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 MAP2K1Q02750 393 aaPredicted RBP8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 WASHC4Q2M389 1173 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 MOB2Q70IA6 237 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 TSPYL6Q8N831 410 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 C8orf58Q8NAV2 365 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 PLBD2Q8NHP8 589 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 OXER1Q8TDS5 423 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 MYD88Q99836 296 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 ISCA1Q9BUE6 129 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 POLR2AP24928 1970 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 ANKRD36CQ5JPF3 1778 aa8.91□□□□□ -0.98
PRPF40B-214ENST00000551320 SPDYE16A6NNV3 312 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 TULP1O00294 542 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 HUNKP57058 714 aa8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 WDR43Q15061 677 aaKnown RBP eCLIP8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 TBC1D16Q8TBP0 767 aa8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 RUNDC1Q96C34 613 aa8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 SCUBE2Q9NQ36 999 aa8.9□□□□□ -0.98
PRPF40B-214ENST00000551320 SCN9AQ15858 1988 aa8.9□□□□□ -0.99
PRPF40B-214ENST00000551320 MYBBP1AQ9BQG0 1328 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 H7C1D1 291 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 UFL1O94874 794 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 TNIP1Q15025 636 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 RALBP1Q15311 655 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 HSP90AB3PQ58FF7 597 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 KRT26Q7Z3Y9 468 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 RIC3Q7Z5B4 369 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 SUPT20HQ8NEM7 779 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 TSR2Q969E8 191 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 BEGAINQ9BUH8 593 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 MCOLN1Q9GZU1 580 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 PGAP2Q9UHJ9 254 aa8.89□□□□□ -0.99
PRPF40B-214ENST00000551320 FAM155AB1AL88 458 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 SNAP23O00161 211 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 ECE1P42892 770 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 RPS8P62241 208 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 LMOD3Q0VAK6 560 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 MAMSTRQ6ZN01 415 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 CDC37L1Q7L3B6 337 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 G2E3Q7L622 706 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 SLAIN1Q8ND83 568 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 FBXW7Q969H0 707 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 GGA3Q9NZ52 723 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 SALL2Q9Y467 1007 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-214ENST00000551320 TRPA1O75762 1119 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 SLC34A2O95436 690 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 KLRK1P26718 216 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 SOX10P56693 466 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 DGKZQ13574 1117 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 PRKG1Q13976 671 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 ANGEL2Q5VTE6 544 aaKnown RBP8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 DBF4Q9UBU7 674 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-214ENST00000551320 UBE2Q2LH0YL09 131 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 ZNF853P0CG23 659 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 SCARF1Q14162 830 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 CWF19L2Q2TBE0 894 aaKnown RBP8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 TXNRD3Q86VQ6 643 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 GBA2Q9HCG7 927 aaPredicted RBP8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 HYPKQ9NX55 129 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 MAP3K2Q9Y2U5 619 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 PCDHAC2Q9Y5I4 1007 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 THSD7BQ9C0I4 1608 aa8.86□□□□□ -0.99
PRPF40B-214ENST00000551320 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
PRPF40B-214ENST00000551320 TBC1D12O60347 775 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms