RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 SCAF8Q9UPN6 1271 aaKnown RBP14.3□□□□□ -0.12
PFDN5-212ENST00000550880 SCN9AQ15858 1988 aa14.3□□□□□ -0.12
PFDN5-212ENST00000550880 WNT10BO00744 389 aa14.29□□□□□ -0.12
PFDN5-212ENST00000550880 STRIP1Q5VSL9 837 aa14.29□□□□□ -0.12
PFDN5-212ENST00000550880 APOBEC3FQ8IUX4 373 aaKnown RBP14.29□□□□□ -0.12
PFDN5-212ENST00000550880 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
PFDN5-212ENST00000550880 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
PFDN5-212ENST00000550880 COL4A1P02462 1669 aa14.29□□□□□ -0.12
PFDN5-212ENST00000550880 CTSWP56202 376 aa14.28□□□□□ -0.12
PFDN5-212ENST00000550880 DACT2Q5SW24 774 aa14.28□□□□□ -0.12
PFDN5-212ENST00000550880 JARID2Q92833 1246 aaPredicted RBP14.28□□□□□ -0.12
PFDN5-212ENST00000550880 MYBBP1AQ9BQG0 1328 aaKnown RBP14.28□□□□□ -0.12
PFDN5-212ENST00000550880 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
PFDN5-212ENST00000550880 CFHR5Q9BXR6 569 aa14.28□□□□□ -0.12
PFDN5-212ENST00000550880 COA1Q9GZY4 146 aa14.28□□□□□ -0.12
PFDN5-212ENST00000550880 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
PFDN5-212ENST00000550880 MED23Q9ULK4 1368 aa14.28□□□□□ -0.12
PFDN5-212ENST00000550880 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
PFDN5-212ENST00000550880 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.13
PFDN5-212ENST00000550880 INHBEP58166 350 aa14.27□□□□□ -0.13
PFDN5-212ENST00000550880 GNAI1P63096 354 aa14.27□□□□□ -0.13
PFDN5-212ENST00000550880 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
PFDN5-212ENST00000550880 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.13
PFDN5-212ENST00000550880 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
PFDN5-212ENST00000550880 PTPN12Q05209 780 aaKnown RBP14.26□□□□□ -0.13
PFDN5-212ENST00000550880 NEXNQ0ZGT2 675 aa14.26□□□□□ -0.13
PFDN5-212ENST00000550880 PRKG1Q13976 671 aa14.26□□□□□ -0.13
PFDN5-212ENST00000550880 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
PFDN5-212ENST00000550880 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
PFDN5-212ENST00000550880 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
PFDN5-212ENST00000550880 ANGEL1Q9UNK9 670 aaKnown RBP14.26□□□□□ -0.13
PFDN5-212ENST00000550880 LEMD3Q9Y2U8 911 aa14.26□□□□□ -0.13
PFDN5-212ENST00000550880 MANSC4A6NHS7 340 aaPredicted RBP14.25□□□□□ -0.13
PFDN5-212ENST00000550880 SASH1O94885 1247 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 SPRYD7Q5W111 196 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 SLC10A4Q96EP9 437 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 MXD3Q9BW11 206 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 ANKRD2Q9GZV1 360 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 ADAMTS8Q9UP79 889 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 MAP3K2Q9Y2U5 619 aa14.25□□□□□ -0.13
PFDN5-212ENST00000550880 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
PFDN5-212ENST00000550880 ZNF853P0CG23 659 aa14.24□□□□□ -0.13
PFDN5-212ENST00000550880 KIAA0825Q8IV33 1275 aa14.24□□□□□ -0.13
PFDN5-212ENST00000550880 GREM2Q9H772 168 aa14.24□□□□□ -0.13
PFDN5-212ENST00000550880 TRIM17Q9Y577 477 aa14.24□□□□□ -0.13
PFDN5-212ENST00000550880 PSME4Q14997 1843 aa14.23□□□□□ -0.13
PFDN5-212ENST00000550880 KCNJ4P48050 445 aa14.23□□□□□ -0.13
PFDN5-212ENST00000550880 LDLRAD1Q5T700 205 aa14.23□□□□□ -0.13
PFDN5-212ENST00000550880 OTUD7BQ6GQQ9 843 aa14.23□□□□□ -0.13
PFDN5-212ENST00000550880 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
PFDN5-212ENST00000550880 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
PFDN5-212ENST00000550880 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.23□□□□□ -0.13
PFDN5-212ENST00000550880 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 WTIPA6NIX2 430 aaPredicted RBP14.22□□□□□ -0.13
PFDN5-212ENST00000550880 MYO1BO43795 1136 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 ZBTB48P10074 688 aaPredicted RBP14.22□□□□□ -0.13
PFDN5-212ENST00000550880 GTF2IP78347 998 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 DLGAP5Q15398 846 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 DEFB129Q9H1M3 183 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
PFDN5-212ENST00000550880 COL1A1P02452 1464 aaPredicted RBP14.21□□□□□ -0.13
PFDN5-212ENST00000550880 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
PFDN5-212ENST00000550880 UNCXA6NJT0 531 aa14.21□□□□□ -0.13
PFDN5-212ENST00000550880 SUPT20HL1Q3ZLR7 823 aa14.21□□□□□ -0.13
PFDN5-212ENST00000550880 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
PFDN5-212ENST00000550880 R3HDMLQ9H3Y0 253 aa14.21□□□□□ -0.13
PFDN5-212ENST00000550880 IGKV5-2P06315 115 aa14.2□□□□□ -0.14
PFDN5-212ENST00000550880 OTOP1Q7RTM1 612 aa14.2□□□□□ -0.14
PFDN5-212ENST00000550880 TXNRD3Q86VQ6 643 aa14.2□□□□□ -0.14
PFDN5-212ENST00000550880 C8orf58Q8NAV2 365 aa14.2□□□□□ -0.14
PFDN5-212ENST00000550880 APAF1O14727 1248 aa14.19□□□□□ -0.14
PFDN5-212ENST00000550880 ITGA6P23229 1130 aa14.19□□□□□ -0.14
PFDN5-212ENST00000550880 IREB2P48200 963 aaKnown RBP14.19□□□□□ -0.14
PFDN5-212ENST00000550880 MAP3K11Q16584 847 aa14.19□□□□□ -0.14
PFDN5-212ENST00000550880 HABP4Q5JVS0 413 aaKnown RBP14.19□□□□□ -0.14
PFDN5-212ENST00000550880 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
PFDN5-212ENST00000550880 ZBED3Q96IU2 234 aaPredicted RBP14.19□□□□□ -0.14
PFDN5-212ENST00000550880 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
PFDN5-212ENST00000550880 NEURL1BA8MQ27 555 aa14.18□□□□□ -0.14
PFDN5-212ENST00000550880 DDX10Q13206 875 aaKnown RBP14.18□□□□□ -0.14
PFDN5-212ENST00000550880 ARHGEF6Q15052 776 aa14.18□□□□□ -0.14
PFDN5-212ENST00000550880 MTMR14Q8NCE2 650 aa14.18□□□□□ -0.14
PFDN5-212ENST00000550880 CD209Q9NNX6 404 aa14.18□□□□□ -0.14
PFDN5-212ENST00000550880 H7C1W4 665 aa14.17□□□□□ -0.14
PFDN5-212ENST00000550880 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
PFDN5-212ENST00000550880 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
PFDN5-212ENST00000550880 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
PFDN5-212ENST00000550880 EFCC1Q9HA90 598 aa14.17□□□□□ -0.14
PFDN5-212ENST00000550880 FZD1Q9UP38 647 aa14.17□□□□□ -0.14
PFDN5-212ENST00000550880 PTPN22Q9Y2R2 807 aa14.17□□□□□ -0.14
PFDN5-212ENST00000550880 ANKRD18BA2A2Z9 1011 aa14.16□□□□□ -0.14
PFDN5-212ENST00000550880 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
PFDN5-212ENST00000550880 IGF2BP3O00425 579 aaKnown RBP eCLIP14.16□□□□□ -0.14
PFDN5-212ENST00000550880 KLRK1P26718 216 aa14.16□□□□□ -0.14
PFDN5-212ENST00000550880 RBM5P52756 815 aaKnown RBP eCLIP14.16□□□□□ -0.14
PFDN5-212ENST00000550880 SP3Q02447 781 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms