RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 C15orf52Q6ZUT6 534 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-209ENST00000550872 KDM2BQ8NHM5 1336 aa20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 KIF3CO14782 793 aa20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 DDNO94850 711 aaPredicted RBP20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 SIRT2Q8IXJ6 389 aa20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 COA1Q9GZY4 146 aa20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 NOP58Q9Y2X3 529 aaKnown RBP20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 A0A1B0GUL6 1792 aa20.1■□□□□ 0.81
CHMP1A-209ENST00000550872 YDJCA8MPS7 323 aa20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 RAD17O75943 681 aa20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 IFIT1P09914 478 aaKnown RBP20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 CXCL9Q07325 125 aa20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 TFCP2Q12800 502 aa20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 CIAPIN1Q6FI81 312 aa20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
CHMP1A-209ENST00000550872 IRS2Q9Y4H2 1338 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 SLC5A1P13866 664 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 FGFR2P21802 821 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 ZNF804AQ7Z570 1209 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 PODNQ7Z5L7 613 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 LPIN2Q92539 896 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 KCNQ5Q9NR82 932 aa20.08■□□□□ 0.81
CHMP1A-209ENST00000550872 TNIP1Q15025 636 aa20.07■□□□□ 0.8
CHMP1A-209ENST00000550872 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
CHMP1A-209ENST00000550872 GPC2Q8N158 579 aa20.07■□□□□ 0.8
CHMP1A-209ENST00000550872 EXOC6Q8TAG9 804 aa20.07■□□□□ 0.8
CHMP1A-209ENST00000550872 EXOC6BQ9Y2D4 811 aa20.07■□□□□ 0.8
CHMP1A-209ENST00000550872 AKAP2Q9Y2D5 859 aa20.07■□□□□ 0.8
CHMP1A-209ENST00000550872 SASH1O94885 1247 aa20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 GYG1P46976 350 aa20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 IRX6P78412 446 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 HSP90AB4PQ58FF6 505 aa20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 CD209Q9NNX6 404 aa20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 PCDHB15Q9Y5E8 787 aa20.06■□□□□ 0.8
CHMP1A-209ENST00000550872 CENPBP07199 599 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-209ENST00000550872 AAMPQ13685 434 aa20.05■□□□□ 0.8
CHMP1A-209ENST00000550872 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
CHMP1A-209ENST00000550872 VPS37DQ86XT2 251 aa20.05■□□□□ 0.8
CHMP1A-209ENST00000550872 RRAGCQ9HB90 399 aa20.05■□□□□ 0.8
CHMP1A-209ENST00000550872 PSMD14O00487 310 aa20.04■□□□□ 0.8
CHMP1A-209ENST00000550872 TOMM70O94826 608 aa20.04■□□□□ 0.8
CHMP1A-209ENST00000550872 NMRK2Q9NPI5 230 aa20.04■□□□□ 0.8
CHMP1A-209ENST00000550872 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 BCAMP50895 628 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 TIMM10P62072 90 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 FBXO33Q7Z6M2 555 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 FBXW7Q969H0 707 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 NEUROD6Q96NK8 337 aa20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-209ENST00000550872 A0A1B0GUL7 405 aa20.02■□□□□ 0.8
CHMP1A-209ENST00000550872 APBB1O00213 710 aa20.02■□□□□ 0.8
CHMP1A-209ENST00000550872 IL1R1P14778 569 aa20.02■□□□□ 0.8
CHMP1A-209ENST00000550872 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.8
CHMP1A-209ENST00000550872 SCN9AQ15858 1988 aa20.02■□□□□ 0.8
CHMP1A-209ENST00000550872 VIL1P09327 827 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 VEGFAP15692 232 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 GMPSP49915 693 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 GTF2IP78347 998 aa20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 TTLL5Q6EMB2 1281 aa20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 TDRD7Q8NHU6 1098 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 GPR108Q9NPR9 543 aa20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 ZBTB12Q9Y330 459 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-209ENST00000550872 POTECB2RU33 542 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 RAB11FIP3O75154 756 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 FRAT2O75474 233 aaPredicted RBP20■□□□□ 0.79
CHMP1A-209ENST00000550872 LMOD1P29536 600 aaPredicted RBP20■□□□□ 0.79
CHMP1A-209ENST00000550872 ADORA1P30542 326 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 TNNI3KQ59H18 835 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 STRIP1Q5VSL9 837 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 RHPN1Q8TCX5 695 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 XAGE2Q96GT9 111 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 IQSEC3Q9UPP2 1182 aaPredicted RBP20■□□□□ 0.79
CHMP1A-209ENST00000550872 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
CHMP1A-209ENST00000550872 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 APLP1P51693 650 aa19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 GORABQ5T7V8 394 aa19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 RSBN1LQ6PCB5 846 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 KIF1BPQ96EK5 621 aa19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 HACL1Q9UJ83 578 aa19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
CHMP1A-209ENST00000550872 RPS12P25398 132 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-209ENST00000550872 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
CHMP1A-209ENST00000550872 DCTPP1Q9H773 170 aa19.98■□□□□ 0.79
CHMP1A-209ENST00000550872 ZNF609O15014 1411 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 EPS15P42566 896 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 PHKA1P46020 1223 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 SCNN1DP51172 638 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 DACT2Q5SW24 774 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 CCDC102BQ68D86 513 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 AGBL3Q8NEM8 1001 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 DPF2Q92785 391 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 MXD3Q9BW11 206 aa19.97■□□□□ 0.79
CHMP1A-209ENST00000550872 BCL11AQ9H165 835 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms