RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 CAMSAP2Q08AD1 1489 aa5.63□□□□□ -1.51
APAF1-209ENST00000550527 ERICH2A1L162 156 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 SMARCA5O60264 1052 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 MAP4K4O95819 1239 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 HNRNPH1P31943 449 aaKnown RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 MTHFSP49914 203 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 CUL3Q13618 768 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 INF2Q27J81 1249 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 IFT20Q8IY31 132 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 KIF1BPQ96EK5 621 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 ST7Q9NRC1 585 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 TRAK1Q9UPV9 953 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 CASKIN1Q8WXD9 1431 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 VIMP08670 466 aaKnown RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 CLTAP09496 248 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 LMOD1P29536 600 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 MMP14P50281 582 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 GKAP1Q5VSY0 366 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 KANK3Q6NY19 840 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 TDRD7Q8NHU6 1098 aaKnown RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 HAUS1Q96CS2 278 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 ESYT1Q9BSJ8 1104 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.62□□□□□ -1.51
APAF1-209ENST00000550527 NAIPQ13075 1403 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 EIF4G1Q04637 1599 aaKnown RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 PTPRCP08575 1304 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 RASSF10A6NK89 507 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 RAB11FIP3O75154 756 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 AMOTQ4VCS5 1084 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 CLEC17AQ6ZS10 378 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 MIER3Q7Z3K6 550 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 PAF1Q8N7H5 531 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 SATB2Q9UPW6 733 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 CIB2O75838 187 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 SND1Q7KZF4 910 aaKnown RBP eCLIP5.62□□□□□ -1.51
APAF1-209ENST00000550527 CNGA4Q8IV77 575 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 C9orf78Q9NZ63 289 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 FAF1Q9UNN5 650 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 USH1CQ9Y6N9 552 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 SEMA3FQ13275 785 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 APLFQ8IW19 511 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 KCNG4Q8TDN1 519 aa5.62□□□□□ -1.51
APAF1-209ENST00000550527 CHMP7Q8WUX9 453 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 TSPYL2Q9H2G4 693 aaPredicted RBP5.62□□□□□ -1.51
APAF1-209ENST00000550527 PTPN23Q9H3S7 1636 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ANKRD65E5RJM6 399 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 FANCCQ00597 558 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 DRP2Q13474 957 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 PDE1CQ14123 709 aaPredicted RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 CCDC170Q8IYT3 715 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 IFT81Q8WYA0 676 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 PPANQ9NQ55 473 aaKnown RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 GUCA1BQ9UMX6 200 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 NOP2P46087 812 aaKnown RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 TMED1Q13445 227 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 CCDC102BQ68D86 513 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ARHGAP18Q8N392 663 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 USP6NLQ92738 828 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 EID1Q9Y6B2 187 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 BLMP54132 1417 aaPredicted RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 A0A0G2JS52 829 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 FLOT1O75955 427 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ALDH3A1P30838 453 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ST5P78524 1137 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 SEPT2Q15019 361 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ATL3Q6DD88 541 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 CROCCP2Q86T23 111 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 THEGQ9P2T0 379 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 STK38LQ9Y2H1 464 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 PPP2R2CQ9Y2T4 447 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ENO4A6NNW6 628 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 CHRM1P11229 460 aaPredicted RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 TNNC1P63316 161 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 MYL5Q02045 173 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 ACTN3Q08043 901 aaPredicted RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 PAK2Q13177 524 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 LAMB3Q13751 1172 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 IFI16Q16666 785 aaKnown RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 HSP90AA5PQ58FG0 334 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 NBPF10Q6P3W6 841 aaKnown RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 TMED8Q6PL24 325 aaPredicted RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 KLHL23Q8NBE8 558 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 CACTINQ8WUQ7 758 aaKnown RBP5.61□□□□□ -1.51
APAF1-209ENST00000550527 SELENOOQ9BVL4 669 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 KIF9Q9HAQ2 790 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 USP19O94966 1318 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 CAND2O75155 1236 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 STAMBPO95630 424 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 RASSF2P50749 326 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 CASP8Q14790 479 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 LRRC45Q96CN5 670 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 NRBP1Q9UHY1 535 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 DAAM1Q9Y4D1 1078 aa5.61□□□□□ -1.51
APAF1-209ENST00000550527 SYKP43405 635 aa5.6□□□□□ -1.51
APAF1-209ENST00000550527 PSME1Q06323 249 aa5.6□□□□□ -1.51
APAF1-209ENST00000550527 SPAG1Q07617 926 aa5.6□□□□□ -1.51
APAF1-209ENST00000550527 SF3B2Q13435 895 aaKnown RBP5.6□□□□□ -1.51
APAF1-209ENST00000550527 CCDC96Q2M329 555 aa5.6□□□□□ -1.51
APAF1-209ENST00000550527 GNPTABQ3T906 1256 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms