RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 CD163Q86VB7 1156 aa6.94□□□□□ -1.3
MRPL42-205ENST00000549561 FBXO11Q86XK2 927 aa6.94□□□□□ -1.3
MRPL42-205ENST00000549561 GALNT12Q8IXK2 581 aa6.94□□□□□ -1.3
MRPL42-205ENST00000549561 IL22RA1Q8N6P7 574 aa6.94□□□□□ -1.3
MRPL42-205ENST00000549561 TMEM102Q8N9M5 508 aaPredicted RBP6.94□□□□□ -1.3
MRPL42-205ENST00000549561 ADAM19Q9H013 955 aa6.94□□□□□ -1.3
MRPL42-205ENST00000549561 DEAF1O75398 565 aaPredicted RBP6.93□□□□□ -1.3
MRPL42-205ENST00000549561 CHRNA4P43681 627 aa6.93□□□□□ -1.3
MRPL42-205ENST00000549561 ORC1Q13415 861 aa6.93□□□□□ -1.3
MRPL42-205ENST00000549561 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
MRPL42-205ENST00000549561 ZKSCAN3Q9BRR0 538 aa6.93□□□□□ -1.3
MRPL42-205ENST00000549561 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
MRPL42-205ENST00000549561 DNAJC25Q9H1X3 360 aa6.93□□□□□ -1.3
MRPL42-205ENST00000549561 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
MRPL42-205ENST00000549561 C1QTNF9BB2RNN3 333 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 PDE2AO00408 941 aaPredicted RBP6.92□□□□□ -1.3
MRPL42-205ENST00000549561 CPNE3O75131 537 aaKnown RBP6.92□□□□□ -1.3
MRPL42-205ENST00000549561 PROCP04070 461 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 SELPP16109 830 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 PTPRAP18433 802 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 CDC27P30260 824 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 DSC3Q14574 896 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 GRIK4Q16099 956 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 USPL1Q5W0Q7 1092 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 TMC1Q8TDI8 760 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 NXPE3Q969Y0 559 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 HHIPQ96QV1 700 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 OSMRQ99650 979 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 BHLHE41Q9C0J9 482 aaPredicted RBP6.92□□□□□ -1.3
MRPL42-205ENST00000549561 NIF3L1Q9GZT8 377 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 LACRTQ9GZZ8 138 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 LATS2Q9NRM7 1088 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 PPME1Q9Y570 386 aa6.92□□□□□ -1.3
MRPL42-205ENST00000549561 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
MRPL42-205ENST00000549561 TM4SF5O14894 197 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 TREHO43280 583 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 TRPA1O75762 1119 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
MRPL42-205ENST00000549561 MAPK1P28482 360 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 SETDB1Q15047 1291 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 SPOCK3Q9BQ16 436 aa6.91□□□□□ -1.3
MRPL42-205ENST00000549561 DLL1O00548 723 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 MSTNO14793 375 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 APBA3O96018 575 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 EPHA1P21709 976 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 LENG1Q96BZ8 264 aaPredicted RBP6.9□□□□□ -1.3
MRPL42-205ENST00000549561 ASB16Q96NS5 453 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 CSRNP1Q96S65 589 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 SOX13Q9UN79 622 aa6.9□□□□□ -1.3
MRPL42-205ENST00000549561 A0A1W2PP55 124 aa6.89□□□□□ -1.31
MRPL42-205ENST00000549561 C9orf172C9J069 976 aa6.89□□□□□ -1.31
MRPL42-205ENST00000549561 KIAA0319Q5VV43 1072 aa6.89□□□□□ -1.31
MRPL42-205ENST00000549561 SND1Q7KZF4 910 aaKnown RBP eCLIP6.89□□□□□ -1.31
MRPL42-205ENST00000549561 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
MRPL42-205ENST00000549561 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 FMR1Q06787 632 aaKnown RBP eCLIP6.88□□□□□ -1.31
MRPL42-205ENST00000549561 ADGRE1Q14246 886 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 SHISA2Q6UWI4 295 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 CCNJLQ8IV13 435 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 ZSCAN29Q8IWY8 852 aaPredicted RBP6.88□□□□□ -1.31
MRPL42-205ENST00000549561 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 TCF12Q99081 682 aa6.88□□□□□ -1.31
MRPL42-205ENST00000549561 H3BRJ5 948 aa6.87□□□□□ -1.31
MRPL42-205ENST00000549561 PLCB3Q01970 1234 aa6.87□□□□□ -1.31
MRPL42-205ENST00000549561 VN1R5Q7Z5H4 357 aa6.87□□□□□ -1.31
MRPL42-205ENST00000549561 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
MRPL42-205ENST00000549561 WNT8BQ93098 351 aa6.87□□□□□ -1.31
MRPL42-205ENST00000549561 NPHS2Q9NP85 383 aa6.87□□□□□ -1.31
MRPL42-205ENST00000549561 FSCN2O14926 492 aa6.86□□□□□ -1.31
MRPL42-205ENST00000549561 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
MRPL42-205ENST00000549561 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
MRPL42-205ENST00000549561 MBTPS1Q14703 1052 aa6.86□□□□□ -1.31
MRPL42-205ENST00000549561 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
MRPL42-205ENST00000549561 TXNDC11Q6PKC3 985 aa6.86□□□□□ -1.31
MRPL42-205ENST00000549561 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
MRPL42-205ENST00000549561 FAM177BA6PVY3 158 aa6.85□□□□□ -1.31
MRPL42-205ENST00000549561 GATA4P43694 442 aa6.85□□□□□ -1.31
MRPL42-205ENST00000549561 CABP4P57796 275 aa6.85□□□□□ -1.31
MRPL42-205ENST00000549561 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
MRPL42-205ENST00000549561 KLHL23Q8NBE8 558 aa6.85□□□□□ -1.31
MRPL42-205ENST00000549561 OSGEPQ9NPF4 335 aa6.85□□□□□ -1.31
MRPL42-205ENST00000549561 A0A096LPE4 126 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 A0A1W2PPZ6 126 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 METTL12A8MUP2 240 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 CD68P34810 354 aaPredicted RBP6.84□□□□□ -1.31
MRPL42-205ENST00000549561 GRIA4P48058 902 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
MRPL42-205ENST00000549561 PRPF40BQ6NWY9 871 aaKnown RBP6.84□□□□□ -1.31
MRPL42-205ENST00000549561 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
MRPL42-205ENST00000549561 TXNRD3Q86VQ6 643 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
MRPL42-205ENST00000549561 SEC31BQ9NQW1 1179 aa6.84□□□□□ -1.31
MRPL42-205ENST00000549561 PNMA6FA0A0J9YX94 578 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms