RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 GALNT11Q8NCW6 608 aa9.41□□□□□ -0.9
SNHG1-224ENST00000545688 TP53INP1Q96A56 240 aa9.41□□□□□ -0.9
SNHG1-224ENST00000545688 POP1Q99575 1024 aaKnown RBP9.41□□□□□ -0.9
SNHG1-224ENST00000545688 SH2B1Q9NRF2 756 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-224ENST00000545688 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-224ENST00000545688 ICMTO60725 284 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 TRPA1O75762 1119 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 USP5P45974 858 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 MEGF10Q96KG7 1140 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
SNHG1-224ENST00000545688 DZANK1Q9NVP4 752 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.9
SNHG1-224ENST00000545688 H3BRB1 525 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 NFKBIEO00221 500 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 EREGO14944 169 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 PHACTR2O75167 634 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 ALX3O95076 343 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 PTPRAP18433 802 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 EPHA1P21709 976 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 GJD3Q8N144 294 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 SNX29Q8TEQ0 813 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 HHIPQ96QV1 700 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 TUT1Q9H6E5 874 aaKnown RBP9.39□□□□□ -0.91
SNHG1-224ENST00000545688 AKTIPQ9H8T0 292 aa9.39□□□□□ -0.91
SNHG1-224ENST00000545688 EHHADHQ08426 723 aa9.38□□□□□ -0.91
SNHG1-224ENST00000545688 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
SNHG1-224ENST00000545688 CARD10Q9BWT7 1032 aa9.38□□□□□ -0.91
SNHG1-224ENST00000545688 ADAM19Q9H013 955 aa9.38□□□□□ -0.91
SNHG1-224ENST00000545688 F8W735 103 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-224ENST00000545688 TM4SF5O14894 197 aa9.37□□□□□ -0.91
SNHG1-224ENST00000545688 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
SNHG1-224ENST00000545688 H2AFB2P0C5Z0 115 aa9.37□□□□□ -0.91
SNHG1-224ENST00000545688 ECM1Q16610 540 aa9.37□□□□□ -0.91
SNHG1-224ENST00000545688 FOXD4L6Q3SYB3 417 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-224ENST00000545688 FOXD4L3Q6VB84 417 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-224ENST00000545688 GLYCTKQ8IVS8 523 aa9.37□□□□□ -0.91
SNHG1-224ENST00000545688 TMEM130Q8N3G9 435 aa9.37□□□□□ -0.91
SNHG1-224ENST00000545688 PDE2AO00408 941 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-224ENST00000545688 FSCN2O14926 492 aa9.36□□□□□ -0.91
SNHG1-224ENST00000545688 AGGF1Q8N302 714 aaeCLIP9.36□□□□□ -0.91
SNHG1-224ENST00000545688 KCNK4Q9NYG8 393 aa9.36□□□□□ -0.91
SNHG1-224ENST00000545688 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
SNHG1-224ENST00000545688 WISP1O95388 367 aa9.35□□□□□ -0.91
SNHG1-224ENST00000545688 CD68P34810 354 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-224ENST00000545688 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
SNHG1-224ENST00000545688 FAM117BQ6P1L5 589 aa9.35□□□□□ -0.91
SNHG1-224ENST00000545688 OSMRQ99650 979 aa9.35□□□□□ -0.91
SNHG1-224ENST00000545688 ZKSCAN3Q9BRR0 538 aa9.35□□□□□ -0.91
SNHG1-224ENST00000545688 H3BRJ5 948 aa9.34□□□□□ -0.91
SNHG1-224ENST00000545688 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.34□□□□□ -0.91
SNHG1-224ENST00000545688 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
SNHG1-224ENST00000545688 LATS2Q9NRM7 1088 aa9.34□□□□□ -0.91
SNHG1-224ENST00000545688 EDN3P14138 238 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 ARHGAP4P98171 946 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 Q6ZS46 218 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 DZIP1LQ8IYY4 767 aaKnown RBP9.33□□□□□ -0.92
SNHG1-224ENST00000545688 TMEM102Q8N9M5 508 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-224ENST00000545688 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 BRPF3Q9ULD4 1205 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 AMOTL2Q9Y2J4 779 aa9.33□□□□□ -0.92
SNHG1-224ENST00000545688 DDX3YO15523 660 aaKnown RBP9.32□□□□□ -0.92
SNHG1-224ENST00000545688 CABP4P57796 275 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 ACAD11Q709F0 780 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-224ENST00000545688 NXPE3Q969Y0 559 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 KLHDC7BQ96G42 594 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 SOX13Q9UN79 622 aa9.32□□□□□ -0.92
SNHG1-224ENST00000545688 ADAM11O75078 769 aa9.31□□□□□ -0.92
SNHG1-224ENST00000545688 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-224ENST00000545688 GLB1P16278 677 aa9.31□□□□□ -0.92
SNHG1-224ENST00000545688 PDE4CQ08493 712 aa9.31□□□□□ -0.92
SNHG1-224ENST00000545688 PEAR1Q5VY43 1037 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-224ENST00000545688 Q8N3U1 123 aa9.31□□□□□ -0.92
SNHG1-224ENST00000545688 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
SNHG1-224ENST00000545688 UBASH3BQ8TF42 649 aa9.3□□□□□ -0.92
SNHG1-224ENST00000545688 NDUFB5O43674 189 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 DUOXA2Q1HG44 320 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 XP32Q5T750 250 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 HGSNATQ68CP4 663 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 KIAA1211Q6ZU35 1233 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 SLC7A3Q8WY07 619 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 BSNDQ8WZ55 320 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 WNT8BQ93098 351 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 OSGEPQ9NPF4 335 aa9.29□□□□□ -0.92
SNHG1-224ENST00000545688 PRR23CQ6ZRP0 262 aa9.28□□□□□ -0.92
SNHG1-224ENST00000545688 ASAP3Q8TDY4 903 aa9.28□□□□□ -0.92
SNHG1-224ENST00000545688 UBL7Q96S82 380 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-224ENST00000545688 BHLHE41Q9C0J9 482 aaPredicted RBP9.28□□□□□ -0.92
SNHG1-224ENST00000545688 NLRP12P59046 1061 aa9.27□□□□□ -0.93
SNHG1-224ENST00000545688 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
SNHG1-224ENST00000545688 VN1R5Q7Z5H4 357 aa9.27□□□□□ -0.93
SNHG1-224ENST00000545688 CCER1Q8TC90 406 aaPredicted RBP9.27□□□□□ -0.93
SNHG1-224ENST00000545688 METTL12A8MUP2 240 aa9.26□□□□□ -0.93
SNHG1-224ENST00000545688 GALNT12Q8IXK2 581 aa9.26□□□□□ -0.93
SNHG1-224ENST00000545688 FAM129BQ96TA1 746 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms