RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 POTEFA5A3E0 1075 aa20.78■□□□□ 0.92
DDX55-212ENST00000544738 UFL1O94874 794 aa20.78■□□□□ 0.92
DDX55-212ENST00000544738 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
DDX55-212ENST00000544738 SREBF2Q12772 1141 aa20.78■□□□□ 0.92
DDX55-212ENST00000544738 KSR2Q6VAB6 950 aa20.78■□□□□ 0.92
DDX55-212ENST00000544738 WDR63Q8IWG1 891 aa20.78■□□□□ 0.92
DDX55-212ENST00000544738 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
DDX55-212ENST00000544738 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.91
DDX55-212ENST00000544738 CENPFP49454 3210 aa20.76■□□□□ 0.91
DDX55-212ENST00000544738 NEXNQ0ZGT2 675 aa20.76■□□□□ 0.91
DDX55-212ENST00000544738 GGA1Q9UJY5 639 aa20.76■□□□□ 0.91
DDX55-212ENST00000544738 MAP3K2Q9Y2U5 619 aa20.76■□□□□ 0.91
DDX55-212ENST00000544738 TRIM17Q9Y577 477 aa20.76■□□□□ 0.91
DDX55-212ENST00000544738 PAPPA2Q9BXP8 1791 aa20.75■□□□□ 0.91
DDX55-212ENST00000544738 PI4KAP2A4QPH2 592 aa20.75■□□□□ 0.91
DDX55-212ENST00000544738 NF2P35240 595 aa20.75■□□□□ 0.91
DDX55-212ENST00000544738 FXR1P51114 621 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX55-212ENST00000544738 PRKG1Q13976 671 aa20.75■□□□□ 0.91
DDX55-212ENST00000544738 NBPF9Q3BBW0 867 aa20.75■□□□□ 0.91
DDX55-212ENST00000544738 INTS3Q68E01 1043 aaKnown RBP20.75■□□□□ 0.91
DDX55-212ENST00000544738 PI4KAP1Q8N8J0 262 aa20.75■□□□□ 0.91
DDX55-212ENST00000544738 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.75■□□□□ 0.91
DDX55-212ENST00000544738 HTTP42858 3142 aa20.74■□□□□ 0.91
DDX55-212ENST00000544738 PDE8AO60658 829 aa20.74■□□□□ 0.91
DDX55-212ENST00000544738 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
DDX55-212ENST00000544738 PTPN12Q05209 780 aaKnown RBP20.74■□□□□ 0.91
DDX55-212ENST00000544738 CCDC152Q4G0S7 254 aa20.74■□□□□ 0.91
DDX55-212ENST00000544738 GMLQ99445 158 aa20.74■□□□□ 0.91
DDX55-212ENST00000544738 PODXL2Q9NZ53 605 aa20.74■□□□□ 0.91
DDX55-212ENST00000544738 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
DDX55-212ENST00000544738 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
DDX55-212ENST00000544738 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
DDX55-212ENST00000544738 SCN9AQ15858 1988 aa20.73■□□□□ 0.91
DDX55-212ENST00000544738 KIAA0100Q14667 2235 aaKnown RBP20.72■□□□□ 0.91
DDX55-212ENST00000544738 USP17L3A6NCW0 530 aa20.72■□□□□ 0.91
DDX55-212ENST00000544738 USP17L4A6NCW7 530 aa20.72■□□□□ 0.91
DDX55-212ENST00000544738 USP17L1Q7RTZ2 530 aa20.72■□□□□ 0.91
DDX55-212ENST00000544738 CFHR5Q9BXR6 569 aa20.72■□□□□ 0.91
DDX55-212ENST00000544738 FANCIQ9NVI1 1328 aa20.72■□□□□ 0.91
DDX55-212ENST00000544738 OTOP1Q7RTM1 612 aa20.71■□□□□ 0.91
DDX55-212ENST00000544738 ARMC9Q7Z3E5 817 aa20.71■□□□□ 0.91
DDX55-212ENST00000544738 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
DDX55-212ENST00000544738 ALDH1A1P00352 501 aa20.7■□□□□ 0.9
DDX55-212ENST00000544738 IGKV5-2P06315 115 aa20.7■□□□□ 0.9
DDX55-212ENST00000544738 EN2P19622 333 aaPredicted RBP20.7■□□□□ 0.9
DDX55-212ENST00000544738 COL4A1P02462 1669 aa20.7■□□□□ 0.9
DDX55-212ENST00000544738 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
DDX55-212ENST00000544738 G2E3Q7L622 706 aa20.69■□□□□ 0.9
DDX55-212ENST00000544738 MXD3Q9BW11 206 aa20.69■□□□□ 0.9
DDX55-212ENST00000544738 VAMP4O75379 141 aa20.68■□□□□ 0.9
DDX55-212ENST00000544738 FLIIQ13045 1269 aa20.68■□□□□ 0.9
DDX55-212ENST00000544738 PODNQ7Z5L7 613 aa20.68■□□□□ 0.9
DDX55-212ENST00000544738 OGFOD1Q8N543 542 aa20.68■□□□□ 0.9
DDX55-212ENST00000544738 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
DDX55-212ENST00000544738 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
DDX55-212ENST00000544738 MYH16Q9H6N6 1097 aa20.68■□□□□ 0.9
DDX55-212ENST00000544738 COLQQ9Y215 455 aaPredicted RBP20.68■□□□□ 0.9
DDX55-212ENST00000544738 NEURL1BA8MQ27 555 aa20.67■□□□□ 0.9
DDX55-212ENST00000544738 WNT10BO00744 389 aa20.67■□□□□ 0.9
DDX55-212ENST00000544738 EXOSC9Q06265 439 aaKnown RBP20.67■□□□□ 0.9
DDX55-212ENST00000544738 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
DDX55-212ENST00000544738 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
DDX55-212ENST00000544738 SLC10A4Q96EP9 437 aa20.67■□□□□ 0.9
DDX55-212ENST00000544738 CCDC85AQ96PX6 553 aaPredicted RBP20.67■□□□□ 0.9
DDX55-212ENST00000544738 ANGEL1Q9UNK9 670 aaKnown RBP20.67■□□□□ 0.9
DDX55-212ENST00000544738 BRCA2P51587 3418 aa20.66■□□□□ 0.9
DDX55-212ENST00000544738 CTSWP56202 376 aa20.66■□□□□ 0.9
DDX55-212ENST00000544738 CWF19L2Q2TBE0 894 aaKnown RBP20.66■□□□□ 0.9
DDX55-212ENST00000544738 IFNL1Q8IU54 200 aa20.66■□□□□ 0.9
DDX55-212ENST00000544738 CDC5LQ99459 802 aaKnown RBP20.66■□□□□ 0.9
DDX55-212ENST00000544738 FZD1Q9UP38 647 aa20.66■□□□□ 0.9
DDX55-212ENST00000544738 PTPN22Q9Y2R2 807 aa20.66■□□□□ 0.9
DDX55-212ENST00000544738 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 ZNF609O15014 1411 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 MANSC4A6NHS7 340 aaPredicted RBP20.65■□□□□ 0.9
DDX55-212ENST00000544738 H7C1W4 665 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 SASH1O94885 1247 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 INHBEP58166 350 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 LDLRAD1Q5T700 205 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 TTLL11Q8NHH1 800 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 DNAAF4Q8WXU2 420 aa20.65■□□□□ 0.9
DDX55-212ENST00000544738 XDHP47989 1333 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
DDX55-212ENST00000544738 ATP2B4P23634 1241 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 GCKRQ14397 625 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 CD99L2Q8TCZ2 262 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
DDX55-212ENST00000544738 CEP290O15078 2479 aa20.63■□□□□ 0.89
DDX55-212ENST00000544738 UBE3BQ7Z3V4 1068 aa20.63■□□□□ 0.89
DDX55-212ENST00000544738 EFCC1Q9HA90 598 aa20.63■□□□□ 0.89
DDX55-212ENST00000544738 SZT2Q5T011 3432 aa20.62■□□□□ 0.89
DDX55-212ENST00000544738 TRIOBPQ9H2D6 2365 aa20.62■□□□□ 0.89
DDX55-212ENST00000544738 DACT2Q5SW24 774 aa20.62■□□□□ 0.89
DDX55-212ENST00000544738 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
DDX55-212ENST00000544738 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDX55-212ENST00000544738 APOBEC3FQ8IUX4 373 aaKnown RBP20.61■□□□□ 0.89
DDX55-212ENST00000544738 ARMC5Q96C12 935 aa20.61■□□□□ 0.89
DDX55-212ENST00000544738 PLA2G12BQ9BX93 195 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms