RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 SLC34A2O95436 690 aa19.81■□□□□ 0.76
RTN3-211ENST00000542238 IGKV5-2P06315 115 aa19.81■□□□□ 0.76
RTN3-211ENST00000542238 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
RTN3-211ENST00000542238 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
RTN3-211ENST00000542238 FBXW7Q969H0 707 aa19.8■□□□□ 0.76
RTN3-211ENST00000542238 GREM2Q9H772 168 aa19.8■□□□□ 0.76
RTN3-211ENST00000542238 MYO3BQ8WXR4 1341 aa19.79■□□□□ 0.76
RTN3-211ENST00000542238 NF2P35240 595 aa19.79■□□□□ 0.76
RTN3-211ENST00000542238 IGHMBP2P38935 993 aaKnown RBP19.79■□□□□ 0.76
RTN3-211ENST00000542238 TTLL12Q14166 644 aaPredicted RBP19.79■□□□□ 0.76
RTN3-211ENST00000542238 COA1Q9GZY4 146 aa19.79■□□□□ 0.76
RTN3-211ENST00000542238 WTIPA6NIX2 430 aaPredicted RBP19.78■□□□□ 0.76
RTN3-211ENST00000542238 MMP14P50281 582 aa19.78■□□□□ 0.76
RTN3-211ENST00000542238 CWF19L2Q2TBE0 894 aaKnown RBP19.78■□□□□ 0.76
RTN3-211ENST00000542238 NBPF9Q3BBW0 867 aa19.78■□□□□ 0.76
RTN3-211ENST00000542238 DACT2Q5SW24 774 aa19.78■□□□□ 0.76
RTN3-211ENST00000542238 STRIP1Q5VSL9 837 aa19.78■□□□□ 0.76
RTN3-211ENST00000542238 CTU1Q7Z7A3 348 aaKnown RBP19.78■□□□□ 0.76
RTN3-211ENST00000542238 LEMD3Q9Y2U8 911 aa19.78■□□□□ 0.76
RTN3-211ENST00000542238 PDE4DIPQ5VU43 2346 aa19.77■□□□□ 0.76
RTN3-211ENST00000542238 NEURL1BA8MQ27 555 aa19.77■□□□□ 0.76
RTN3-211ENST00000542238 UBE2Q2LH0YL09 131 aa19.77■□□□□ 0.76
RTN3-211ENST00000542238 UBE3BQ7Z3V4 1068 aa19.77■□□□□ 0.76
RTN3-211ENST00000542238 TSR2Q969E8 191 aaKnown RBP19.77■□□□□ 0.76
RTN3-211ENST00000542238 SCAF8Q9UPN6 1271 aaKnown RBP19.77■□□□□ 0.76
RTN3-211ENST00000542238 PRAMEF18Q5VWM3 479 aa19.76■□□□□ 0.75
RTN3-211ENST00000542238 MOB2Q70IA6 237 aa19.76■□□□□ 0.75
RTN3-211ENST00000542238 MXD3Q9BW11 206 aa19.76■□□□□ 0.75
RTN3-211ENST00000542238 ANKRD2Q9GZV1 360 aa19.76■□□□□ 0.75
RTN3-211ENST00000542238 ZNF646O15015 1829 aaPredicted RBP19.76■□□□□ 0.75
RTN3-211ENST00000542238 H7C1W4 665 aa19.75■□□□□ 0.75
RTN3-211ENST00000542238 WNT10BO00744 389 aa19.75■□□□□ 0.75
RTN3-211ENST00000542238 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
RTN3-211ENST00000542238 TWISTNBQ3B726 338 aaPredicted RBP19.75■□□□□ 0.75
RTN3-211ENST00000542238 MPHOSPH8Q99549 860 aa19.75■□□□□ 0.75
RTN3-211ENST00000542238 HDAC9Q9UKV0 1011 aa19.75■□□□□ 0.75
RTN3-211ENST00000542238 ZNF804BA4D1E1 1349 aa19.75■□□□□ 0.75
RTN3-211ENST00000542238 TNRC18O15417 2968 aaPredicted RBP19.74■□□□□ 0.75
RTN3-211ENST00000542238 SOX10P56693 466 aa19.74■□□□□ 0.75
RTN3-211ENST00000542238 TTLL5Q6EMB2 1281 aa19.74■□□□□ 0.75
RTN3-211ENST00000542238 CACNA1FO60840 1977 aa19.74■□□□□ 0.75
RTN3-211ENST00000542238 ITGA6P23229 1130 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 KCNJ4P48050 445 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 G2E3Q7L622 706 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 PLA2G12BQ9BX93 195 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 MYH16Q9H6N6 1097 aa19.73■□□□□ 0.75
RTN3-211ENST00000542238 SASH1O94885 1247 aa19.72■□□□□ 0.75
RTN3-211ENST00000542238 GCKRQ14397 625 aa19.72■□□□□ 0.75
RTN3-211ENST00000542238 PKN2Q16513 984 aaKnown RBP19.72■□□□□ 0.75
RTN3-211ENST00000542238 ARMC9Q7Z3E5 817 aa19.72■□□□□ 0.75
RTN3-211ENST00000542238 APOBEC3FQ8IUX4 373 aaKnown RBP19.72■□□□□ 0.75
RTN3-211ENST00000542238 TBC1D8O95759 1140 aa19.71■□□□□ 0.75
RTN3-211ENST00000542238 TM4SF4P48230 202 aa19.71■□□□□ 0.75
RTN3-211ENST00000542238 KIAA0825Q8IV33 1275 aa19.71■□□□□ 0.75
RTN3-211ENST00000542238 WWC1Q8IX03 1113 aa19.71■□□□□ 0.75
RTN3-211ENST00000542238 GTF2IP78347 998 aa19.7■□□□□ 0.74
RTN3-211ENST00000542238 SREBF2Q12772 1141 aa19.7■□□□□ 0.74
RTN3-211ENST00000542238 FLIIQ13045 1269 aa19.7■□□□□ 0.74
RTN3-211ENST00000542238 FKBP5Q13451 457 aaPredicted RBP19.7■□□□□ 0.74
RTN3-211ENST00000542238 ZNF296Q8WUU4 475 aaPredicted RBP19.7■□□□□ 0.74
RTN3-211ENST00000542238 CSF1RP07333 972 aa19.69■□□□□ 0.74
RTN3-211ENST00000542238 MKRN3Q13064 507 aaKnown RBP19.69■□□□□ 0.74
RTN3-211ENST00000542238 PRKG1Q13976 671 aa19.69■□□□□ 0.74
RTN3-211ENST00000542238 LINS1Q8NG48 757 aa19.69■□□□□ 0.74
RTN3-211ENST00000542238 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
RTN3-211ENST00000542238 HPS5Q9UPZ3 1129 aa19.69■□□□□ 0.74
RTN3-211ENST00000542238 IL16Q14005 1332 aa19.69■□□□□ 0.74
RTN3-211ENST00000542238 ANKRD18BA2A2Z9 1011 aa19.68■□□□□ 0.74
RTN3-211ENST00000542238 KLRK1P26718 216 aa19.68■□□□□ 0.74
RTN3-211ENST00000542238 CHRNDQ07001 517 aa19.68■□□□□ 0.74
RTN3-211ENST00000542238 NOM1Q5C9Z4 860 aaKnown RBP19.68■□□□□ 0.74
RTN3-211ENST00000542238 GPR25O00155 361 aa19.67■□□□□ 0.74
RTN3-211ENST00000542238 CASP7P55210 303 aa19.67■□□□□ 0.74
RTN3-211ENST00000542238 PTPN12Q05209 780 aaKnown RBP19.67■□□□□ 0.74
RTN3-211ENST00000542238 DLGAP5Q15398 846 aa19.67■□□□□ 0.74
RTN3-211ENST00000542238 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
RTN3-211ENST00000542238 COL1A1P02452 1464 aaPredicted RBP19.67■□□□□ 0.74
RTN3-211ENST00000542238 ZBED3Q96IU2 234 aaPredicted RBP19.66■□□□□ 0.74
RTN3-211ENST00000542238 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
RTN3-211ENST00000542238 ECM29Q5VYK3 1845 aa19.66■□□□□ 0.74
RTN3-211ENST00000542238 IFIT5Q13325 482 aaKnown RBP19.65■□□□□ 0.74
RTN3-211ENST00000542238 DEFB129Q9H1M3 183 aa19.65■□□□□ 0.74
RTN3-211ENST00000542238 MYO1BO43795 1136 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 FKTNO75072 461 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 ALDH1A1P00352 501 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
RTN3-211ENST00000542238 LDLRAD1Q5T700 205 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 SPRYD7Q5W111 196 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 ZNF804AQ7Z570 1209 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 SLC10A4Q96EP9 437 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 CHMP3Q9Y3E7 222 aa19.64■□□□□ 0.73
RTN3-211ENST00000542238 TAF5LO75529 589 aa19.63■□□□□ 0.73
RTN3-211ENST00000542238 INHBEP58166 350 aa19.63■□□□□ 0.73
RTN3-211ENST00000542238 FBXO46Q6PJ61 603 aaPredicted RBP19.63■□□□□ 0.73
RTN3-211ENST00000542238 C15orf52Q6ZUT6 534 aaKnown RBP19.63■□□□□ 0.73
RTN3-211ENST00000542238 MTMR14Q8NCE2 650 aa19.63■□□□□ 0.73
RTN3-211ENST00000542238 HELBQ8NG08 1087 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms